RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 CCSER1Q9C0I3 900 aa18.16■□□□□ 0.5
TUBB3-201ENST00000315491 TBC1D22BQ9NU19 505 aa18.16■□□□□ 0.5
TUBB3-201ENST00000315491 KCNH3Q9ULD8 1083 aa18.16■□□□□ 0.5
TUBB3-201ENST00000315491 LRRC37A2A6NM11 1700 aa18.16■□□□□ 0.5
TUBB3-201ENST00000315491 ATP9AO75110 1047 aa18.15■□□□□ 0.5
TUBB3-201ENST00000315491 CYP2B6P20813 491 aa18.15■□□□□ 0.5
TUBB3-201ENST00000315491 SYKP43405 635 aa18.15■□□□□ 0.5
TUBB3-201ENST00000315491 SNW1Q13573 536 aaKnown RBP18.15■□□□□ 0.5
TUBB3-201ENST00000315491 MSL3Q8N5Y2 521 aaKnown RBP18.15■□□□□ 0.5
TUBB3-201ENST00000315491 PDCL3Q9H2J4 239 aa18.15■□□□□ 0.5
TUBB3-201ENST00000315491 DACT1Q9NYF0 836 aa18.15■□□□□ 0.5
TUBB3-201ENST00000315491 PLXNA1Q9UIW2 1896 aa18.15■□□□□ 0.5
TUBB3-201ENST00000315491 GPR25O00155 361 aa18.14■□□□□ 0.5
TUBB3-201ENST00000315491 DHX15O43143 795 aaKnown RBP18.14■□□□□ 0.5
TUBB3-201ENST00000315491 KCNA2P16389 499 aa18.14■□□□□ 0.5
TUBB3-201ENST00000315491 MAP2K1Q02750 393 aaPredicted RBP18.14■□□□□ 0.5
TUBB3-201ENST00000315491 PPP2R5CQ13362 524 aa18.14■□□□□ 0.5
TUBB3-201ENST00000315491 NCAPH2Q6IBW4 605 aa18.14■□□□□ 0.5
TUBB3-201ENST00000315491 CABP7Q86V35 215 aa18.14■□□□□ 0.5
TUBB3-201ENST00000315491 FBXO16Q8IX29 292 aaPredicted RBP18.14■□□□□ 0.5
TUBB3-201ENST00000315491 APBA2Q99767 749 aa18.14■□□□□ 0.5
TUBB3-201ENST00000315491 TINF2Q9BSI4 451 aa18.14■□□□□ 0.5
TUBB3-201ENST00000315491 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.14■□□□□ 0.5
TUBB3-201ENST00000315491 DDX39AO00148 427 aaKnown RBP18.14■□□□□ 0.49
TUBB3-201ENST00000315491 ZNF202O95125 648 aa18.14■□□□□ 0.49
TUBB3-201ENST00000315491 KRT79Q5XKE5 535 aa18.14■□□□□ 0.49
TUBB3-201ENST00000315491 CAVIN1Q6NZI2 390 aaKnown RBP18.14■□□□□ 0.49
TUBB3-201ENST00000315491 B3GNT9Q6UX72 402 aa18.14■□□□□ 0.49
TUBB3-201ENST00000315491 SDF4Q9BRK5 362 aa18.14■□□□□ 0.49
TUBB3-201ENST00000315491 MMTAG2Q9BU76 263 aaKnown RBP18.14■□□□□ 0.49
TUBB3-201ENST00000315491 UNC45AQ9H3U1 944 aa18.14■□□□□ 0.49
TUBB3-201ENST00000315491 DDX19AQ9NUU7 478 aaKnown RBP18.14■□□□□ 0.49
TUBB3-201ENST00000315491 SYNGAP1Q96PV0 1343 aa18.14■□□□□ 0.49
TUBB3-201ENST00000315491 NFASCO94856 1347 aa18.13■□□□□ 0.49
TUBB3-201ENST00000315491 SNAI1O95863 264 aaPredicted RBP18.13■□□□□ 0.49
TUBB3-201ENST00000315491 KCNV1Q6PIU1 500 aa18.13■□□□□ 0.49
TUBB3-201ENST00000315491 PDILTQ8N807 584 aa18.13■□□□□ 0.49
TUBB3-201ENST00000315491 ERMNQ8TAM6 284 aa18.13■□□□□ 0.49
TUBB3-201ENST00000315491 SNX29Q8TEQ0 813 aa18.13■□□□□ 0.49
TUBB3-201ENST00000315491 VTA1Q9NP79 307 aa18.13■□□□□ 0.49
TUBB3-201ENST00000315491 CCDC39Q9UFE4 941 aa18.13■□□□□ 0.49
TUBB3-201ENST00000315491 STK24Q9Y6E0 443 aa18.13■□□□□ 0.49
TUBB3-201ENST00000315491 A0A087X0B3 334 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 POLR2DO15514 142 aaKnown RBP18.12■□□□□ 0.49
TUBB3-201ENST00000315491 CHMP2AO43633 222 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 KINO60870 393 aaKnown RBP18.12■□□□□ 0.49
TUBB3-201ENST00000315491 TGFB3P10600 412 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 KARSQ15046 597 aaKnown RBP18.12■□□□□ 0.49
TUBB3-201ENST00000315491 OLFML2BQ68BL8 750 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 RASSF8Q8NHQ8 419 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 CD99L2Q8TCZ2 262 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 SYAP1Q96A49 352 aaPredicted RBP18.12■□□□□ 0.49
TUBB3-201ENST00000315491 SENP7Q9BQF6 1050 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 PYM1Q9BRP8 204 aaKnown RBP18.12■□□□□ 0.49
TUBB3-201ENST00000315491 TCEAL9Q9UHQ7 104 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 MGAMO43451 1857 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 EML1O00423 815 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 CAP1Q01518 475 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 SP2Q02086 613 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 ZRSR1Q15695 479 aaKnown RBP18.12■□□□□ 0.49
TUBB3-201ENST00000315491 HAUS3Q68CZ6 603 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 CALML4Q96GE6 196 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 BEGAINQ9BUH8 593 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 KATNBL1Q9H079 304 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 GZF1Q9H116 711 aaPredicted RBP18.12■□□□□ 0.49
TUBB3-201ENST00000315491 DISC1Q9NRI5 854 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 FLRT1Q9NZU1 646 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 TMEM63CQ9P1W3 806 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 GABRQQ9UN88 632 aa18.12■□□□□ 0.49
TUBB3-201ENST00000315491 ZSWIM8A7E2V4 1837 aa18.11■□□□□ 0.49
TUBB3-201ENST00000315491 SLC26A4O43511 780 aa18.11■□□□□ 0.49
TUBB3-201ENST00000315491 FKTNO75072 461 aa18.11■□□□□ 0.49
TUBB3-201ENST00000315491 XRCC5P13010 732 aaKnown RBP18.11■□□□□ 0.49
TUBB3-201ENST00000315491 UBA1P22314 1058 aaKnown RBP18.11■□□□□ 0.49
TUBB3-201ENST00000315491 FLT3LGP49771 235 aa18.11■□□□□ 0.49
TUBB3-201ENST00000315491 TERF1P54274 439 aa18.11■□□□□ 0.49
TUBB3-201ENST00000315491 KRT76Q01546 638 aa18.11■□□□□ 0.49
TUBB3-201ENST00000315491 PRKCZQ05513 592 aa18.11■□□□□ 0.49
TUBB3-201ENST00000315491 CCL14Q16627 93 aa18.11■□□□□ 0.49
TUBB3-201ENST00000315491 DHX58Q96C10 678 aa18.11■□□□□ 0.49
TUBB3-201ENST00000315491 ERO1AQ96HE7 468 aa18.11■□□□□ 0.49
TUBB3-201ENST00000315491 TIGD1Q96MW7 591 aa18.11■□□□□ 0.49
TUBB3-201ENST00000315491 DDX41Q9UJV9 622 aaKnown RBP18.11■□□□□ 0.49
TUBB3-201ENST00000315491 ARIH2O95376 493 aa18.1■□□□□ 0.49
TUBB3-201ENST00000315491 CCT6AP40227 531 aaKnown RBP18.1■□□□□ 0.49
TUBB3-201ENST00000315491 NEDD9Q14511 834 aa18.1■□□□□ 0.49
TUBB3-201ENST00000315491 TTLL4Q14679 1199 aa18.1■□□□□ 0.49
TUBB3-201ENST00000315491 EPHA7Q15375 998 aa18.1■□□□□ 0.49
TUBB3-201ENST00000315491 LONRF3Q496Y0 759 aa18.1■□□□□ 0.49
TUBB3-201ENST00000315491 CCDC183Q5T5S1 534 aa18.1■□□□□ 0.49
TUBB3-201ENST00000315491 RRAGBQ5VZM2 374 aa18.1■□□□□ 0.49
TUBB3-201ENST00000315491 TAPT1Q6NXT6 567 aa18.1■□□□□ 0.49
TUBB3-201ENST00000315491 MIER3Q7Z3K6 550 aa18.1■□□□□ 0.49
TUBB3-201ENST00000315491 IQUBQ8NA54 791 aa18.1■□□□□ 0.49
TUBB3-201ENST00000315491 GIMAP8Q8ND71 665 aaPredicted RBP18.1■□□□□ 0.49
TUBB3-201ENST00000315491 SCFD2Q8WU76 684 aa18.1■□□□□ 0.49
TUBB3-201ENST00000315491 TRIM44Q96DX7 344 aaPredicted RBP18.1■□□□□ 0.49
TUBB3-201ENST00000315491 CDK5RAP3Q96JB5 506 aa18.1■□□□□ 0.49
TUBB3-201ENST00000315491 EIF2AK1Q9BQI3 630 aaKnown RBP18.1■□□□□ 0.49
TUBB3-201ENST00000315491 NUP62CLQ9H1M0 184 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms