RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 GPBP1Q86WP2 473 aa25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 IRF2BP1Q8IU81 584 aa25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 TC2NQ8N9U0 490 aa25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 C12orf42Q96LP6 360 aa25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 TAAR1Q96RJ0 339 aa25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 EIF2AK1Q9BQI3 630 aaKnown RBP25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 ZNF577Q9BSK1 485 aa25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 SRRTQ9BXP5 876 aaKnown RBP25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 ANKRD40Q6AI12 368 aa25.02■■□□□ 1.6
PDLIM2-202ENST00000308354 SLC5A5Q92911 643 aa25.02■■□□□ 1.6
PDLIM2-202ENST00000308354 DHTKD1Q96HY7 919 aaPredicted RBP25.02■■□□□ 1.6
PDLIM2-202ENST00000308354 CTAGE1Q96RT6 745 aa25.02■■□□□ 1.6
PDLIM2-202ENST00000308354 LRRC27Q9C0I9 530 aa25.02■■□□□ 1.6
PDLIM2-202ENST00000308354 VPS16Q9H269 839 aa25.02■■□□□ 1.6
PDLIM2-202ENST00000308354 TAB2Q9NYJ8 693 aa25.02■■□□□ 1.6
PDLIM2-202ENST00000308354 TMOD4Q9NZQ9 345 aa25.02■■□□□ 1.6
PDLIM2-202ENST00000308354 PHIPQ8WWQ0 1821 aa25.02■■□□□ 1.6
PDLIM2-202ENST00000308354 EIF2AK2P19525 551 aaKnown RBP25.02■■□□□ 1.6
PDLIM2-202ENST00000308354 LRRC41Q15345 812 aa25.02■■□□□ 1.6
PDLIM2-202ENST00000308354 TCP11X2Q5H9J9 407 aa25.02■■□□□ 1.6
PDLIM2-202ENST00000308354 P2RX5Q93086 422 aa25.02■■□□□ 1.6
PDLIM2-202ENST00000308354 PAXBP1Q9Y5B6 917 aa25.02■■□□□ 1.6
PDLIM2-202ENST00000308354 GAS7O60861 476 aa25.01■■□□□ 1.59
PDLIM2-202ENST00000308354 MAP3K9P80192 1104 aa25.01■■□□□ 1.59
PDLIM2-202ENST00000308354 CTTNQ14247 550 aaKnown RBP25.01■■□□□ 1.59
PDLIM2-202ENST00000308354 SNRNP48Q6IEG0 339 aaKnown RBP25.01■■□□□ 1.59
PDLIM2-202ENST00000308354 DUSP9Q99956 384 aaKnown RBP25.01■■□□□ 1.59
PDLIM2-202ENST00000308354 MXRA8Q9BRK3 442 aa25.01■■□□□ 1.59
PDLIM2-202ENST00000308354 WDR11Q9BZH6 1224 aa25.01■■□□□ 1.59
PDLIM2-202ENST00000308354 TBC1D7Q9P0N9 293 aa25.01■■□□□ 1.59
PDLIM2-202ENST00000308354 CYP11B2P19099 503 aa25.01■■□□□ 1.59
PDLIM2-202ENST00000308354 DSG3P32926 999 aa25.01■■□□□ 1.59
PDLIM2-202ENST00000308354 SLC12A3P55017 1021 aa25.01■■□□□ 1.59
PDLIM2-202ENST00000308354 COG2Q14746 738 aa25.01■■□□□ 1.59
PDLIM2-202ENST00000308354 MOB2Q70IA6 237 aa25.01■■□□□ 1.59
PDLIM2-202ENST00000308354 BMP2KQ9NSY1 1161 aaPredicted RBP25.01■■□□□ 1.59
PDLIM2-202ENST00000308354 RNF146Q9NTX7 359 aa25.01■■□□□ 1.59
PDLIM2-202ENST00000308354 PANK4Q9NVE7 773 aa25.01■■□□□ 1.59
PDLIM2-202ENST00000308354 RPTORQ8N122 1335 aa25.01■■□□□ 1.59
PDLIM2-202ENST00000308354 DDX39AO00148 427 aaKnown RBP25■■□□□ 1.59
PDLIM2-202ENST00000308354 CCNE1P24864 410 aa25■■□□□ 1.59
PDLIM2-202ENST00000308354 COASYQ13057 564 aa25■■□□□ 1.59
PDLIM2-202ENST00000308354 ARSHQ5FYA8 562 aa25■■□□□ 1.59
PDLIM2-202ENST00000308354 DPY19L2Q6NUT2 758 aa25■■□□□ 1.59
PDLIM2-202ENST00000308354 RNF207Q6ZRF8 634 aa25■■□□□ 1.59
PDLIM2-202ENST00000308354 CATSPERGQ6ZRH7 1159 aa25■■□□□ 1.59
PDLIM2-202ENST00000308354 CSGALNACT2Q8N6G5 542 aa25■■□□□ 1.59
PDLIM2-202ENST00000308354 REPS2Q8NFH8 660 aa25■■□□□ 1.59
PDLIM2-202ENST00000308354 SEMA6BQ9H3T3 888 aa25■■□□□ 1.59
PDLIM2-202ENST00000308354 LIMA1Q9UHB6 759 aaKnown RBP25■■□□□ 1.59
PDLIM2-202ENST00000308354 DNM3Q9UQ16 869 aa25■■□□□ 1.59
PDLIM2-202ENST00000308354 IPO5O00410 1097 aaKnown RBP25■■□□□ 1.59
PDLIM2-202ENST00000308354 PBX1P40424 430 aa25■■□□□ 1.59
PDLIM2-202ENST00000308354 EHHADHQ08426 723 aa25■■□□□ 1.59
PDLIM2-202ENST00000308354 FILIP1LQ4L180 1135 aa25■■□□□ 1.59
PDLIM2-202ENST00000308354 BAG1Q99933 345 aaPredicted RBP25■■□□□ 1.59
PDLIM2-202ENST00000308354 N4BP3O15049 544 aa24.99■■□□□ 1.59
PDLIM2-202ENST00000308354 PPP1R12BO60237 982 aaPredicted RBP24.99■■□□□ 1.59
PDLIM2-202ENST00000308354 MRPS9P82933 396 aaKnown RBP24.99■■□□□ 1.59
PDLIM2-202ENST00000308354 TMEM132BQ14DG7 1078 aa24.99■■□□□ 1.59
PDLIM2-202ENST00000308354 TPH2Q8IWU9 490 aa24.99■■□□□ 1.59
PDLIM2-202ENST00000308354 FGFBP2Q9BYJ0 223 aa24.99■■□□□ 1.59
PDLIM2-202ENST00000308354 ZHX3Q9H4I2 956 aa24.99■■□□□ 1.59
PDLIM2-202ENST00000308354 ZNF214Q9UL59 606 aaPredicted RBP24.99■■□□□ 1.59
PDLIM2-202ENST00000308354 PARP14Q460N5 1801 aa24.99■■□□□ 1.59
PDLIM2-202ENST00000308354 KRT18P05783 430 aaKnown RBP24.98■■□□□ 1.59
PDLIM2-202ENST00000308354 COPB1P53618 953 aaKnown RBP24.98■■□□□ 1.59
PDLIM2-202ENST00000308354 GHRHRQ02643 423 aa24.98■■□□□ 1.59
PDLIM2-202ENST00000308354 BAATQ14032 418 aaPredicted RBP24.98■■□□□ 1.59
PDLIM2-202ENST00000308354 PIGOQ8TEQ8 1089 aa24.98■■□□□ 1.59
PDLIM2-202ENST00000308354 DYDC2Q96IM9 177 aa24.98■■□□□ 1.59
PDLIM2-202ENST00000308354 UNC45AQ9H3U1 944 aa24.98■■□□□ 1.59
PDLIM2-202ENST00000308354 POLD4Q9HCU8 107 aa24.98■■□□□ 1.59
PDLIM2-202ENST00000308354 KCNH7Q9NS40 1196 aa24.98■■□□□ 1.59
PDLIM2-202ENST00000308354 PEX10O60683 326 aa24.98■■□□□ 1.59
PDLIM2-202ENST00000308354 MYCLP12524 364 aaPredicted RBP24.98■■□□□ 1.59
PDLIM2-202ENST00000308354 SETQ01105 290 aaPredicted RBP24.98■■□□□ 1.59
PDLIM2-202ENST00000308354 PPP2R5CQ13362 524 aa24.98■■□□□ 1.59
PDLIM2-202ENST00000308354 PLS1Q14651 629 aa24.98■■□□□ 1.59
PDLIM2-202ENST00000308354 HSD17B14Q9BPX1 270 aa24.98■■□□□ 1.59
PDLIM2-202ENST00000308354 BHMT2Q9H2M3 363 aa24.98■■□□□ 1.59
PDLIM2-202ENST00000308354 RLFQ13129 1914 aa24.98■■□□□ 1.59
PDLIM2-202ENST00000308354 LRRC10BA6NIK2 292 aa24.97■■□□□ 1.59
PDLIM2-202ENST00000308354 ZBTB39O15060 712 aa24.97■■□□□ 1.59
PDLIM2-202ENST00000308354 ARHGAP6O43182 974 aa24.97■■□□□ 1.59
PDLIM2-202ENST00000308354 SLC26A4O43511 780 aa24.97■■□□□ 1.59
PDLIM2-202ENST00000308354 SLITRK3O94933 977 aa24.97■■□□□ 1.59
PDLIM2-202ENST00000308354 FDX1P10109 184 aa24.97■■□□□ 1.59
PDLIM2-202ENST00000308354 SPAG1Q07617 926 aa24.97■■□□□ 1.59
PDLIM2-202ENST00000308354 TREML2Q5T2D2 321 aa24.97■■□□□ 1.59
PDLIM2-202ENST00000308354 RMDN3Q96TC7 470 aa24.97■■□□□ 1.59
PDLIM2-202ENST00000308354 POLR3CQ9BUI4 534 aaPredicted RBP24.97■■□□□ 1.59
PDLIM2-202ENST00000308354 ELP3Q9H9T3 547 aa24.97■■□□□ 1.59
PDLIM2-202ENST00000308354 ADAMTS5Q9UNA0 930 aa24.97■■□□□ 1.59
PDLIM2-202ENST00000308354 CSADQ9Y600 493 aa24.97■■□□□ 1.59
PDLIM2-202ENST00000308354 BICDL2A1A5D9 508 aa24.97■■□□□ 1.59
PDLIM2-202ENST00000308354 EPHX2P34913 555 aa24.97■■□□□ 1.59
PDLIM2-202ENST00000308354 ANKRD20A12PQ8NF67 263 aa24.97■■□□□ 1.59
PDLIM2-202ENST00000308354 CLMNQ96JQ2 1002 aa24.97■■□□□ 1.59
PDLIM2-202ENST00000308354 COL11A1P12107 1806 aaPredicted RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms