RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 KDM3AQ9Y4C1 1321 aa20.67■□□□□ 0.9
RNF139-201ENST00000303545 IPO7O95373 1038 aaKnown RBP20.67■□□□□ 0.9
RNF139-201ENST00000303545 KRT83P78385 493 aa20.67■□□□□ 0.9
RNF139-201ENST00000303545 AMPD2Q01433 879 aa20.67■□□□□ 0.9
RNF139-201ENST00000303545 PSMD2Q13200 908 aa20.67■□□□□ 0.9
RNF139-201ENST00000303545 MIGA2Q7L4E1 593 aa20.67■□□□□ 0.9
RNF139-201ENST00000303545 PRR12Q9ULL5 1215 aa20.67■□□□□ 0.9
RNF139-201ENST00000303545 ZNF76P36508 570 aa20.66■□□□□ 0.9
RNF139-201ENST00000303545 EIF4A3P38919 411 aaKnown RBP20.66■□□□□ 0.9
RNF139-201ENST00000303545 EN1Q05925 392 aaPredicted RBP20.66■□□□□ 0.9
RNF139-201ENST00000303545 VEZTQ9HBM0 779 aa20.66■□□□□ 0.9
RNF139-201ENST00000303545 CTAGE15A4D2H0 777 aa20.66■□□□□ 0.9
RNF139-201ENST00000303545 POLR3GO15318 223 aaPredicted RBP20.66■□□□□ 0.9
RNF139-201ENST00000303545 CFBP00751 764 aa20.66■□□□□ 0.9
RNF139-201ENST00000303545 CTAGE8P0CG41 777 aa20.66■□□□□ 0.9
RNF139-201ENST00000303545 SPIRE1Q08AE8 756 aa20.66■□□□□ 0.9
RNF139-201ENST00000303545 ENOX2Q16206 610 aaKnown RBP20.66■□□□□ 0.9
RNF139-201ENST00000303545 FAM83BQ5T0W9 1011 aa20.66■□□□□ 0.9
RNF139-201ENST00000303545 CC2D2BQ6DHV5 1058 aa20.66■□□□□ 0.9
RNF139-201ENST00000303545 CTAGE6Q86UF2 777 aa20.66■□□□□ 0.9
RNF139-201ENST00000303545 CTAGE4Q8IX94 777 aa20.66■□□□□ 0.9
RNF139-201ENST00000303545 CCDC65Q8IXS2 484 aa20.66■□□□□ 0.9
RNF139-201ENST00000303545 GMCL1P1Q8NEA9 526 aa20.66■□□□□ 0.9
RNF139-201ENST00000303545 SCFD1Q8WVM8 642 aa20.66■□□□□ 0.9
RNF139-201ENST00000303545 LENG9Q96B70 501 aa20.66■□□□□ 0.9
RNF139-201ENST00000303545 GTPBP4Q9BZE4 634 aaKnown RBP20.66■□□□□ 0.9
RNF139-201ENST00000303545 SUGCTQ9HAC7 445 aa20.66■□□□□ 0.9
RNF139-201ENST00000303545 PCDHA2Q9Y5H9 948 aa20.66■□□□□ 0.9
RNF139-201ENST00000303545 ZNF646O15015 1829 aaPredicted RBP20.66■□□□□ 0.9
RNF139-201ENST00000303545 ZNF185O15231 689 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 KCNMA1Q12791 1236 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 HYIQ5T013 277 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 ANKRD13CQ8N6S4 541 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 DEF6Q9H4E7 631 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 ARFGAP3Q9NP61 516 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 RGL1Q9NZL6 768 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 MYO1AQ9UBC5 1043 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 COL4A3BPQ9Y5P4 624 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 CYP3A7-CYP3A51PA0A087WV96 503 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 EIF3CLB5ME19 914 aaKnown RBP20.65■□□□□ 0.9
RNF139-201ENST00000303545 MSH4O15457 936 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 CHMP2AO43633 222 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 KRT86O43790 486 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 FGFR1OPO95684 399 aaKnown RBP20.65■□□□□ 0.9
RNF139-201ENST00000303545 CYP3A7P24462 503 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 SLC12A3P55017 1021 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 FKBP1AP62942 108 aaKnown RBP20.65■□□□□ 0.9
RNF139-201ENST00000303545 ZCWPW2Q504Y3 356 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 CRYGNQ8WXF5 182 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 GMCL1Q96IK5 515 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 EIF3CQ99613 913 aaKnown RBP20.65■□□□□ 0.9
RNF139-201ENST00000303545 MLXIPQ9HAP2 919 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 ZNF277Q9NRM2 450 aaPredicted RBP20.65■□□□□ 0.9
RNF139-201ENST00000303545 EMILIN3Q9NT22 766 aa20.65■□□□□ 0.9
RNF139-201ENST00000303545 RSPH10B2B2RC85 870 aa20.64■□□□□ 0.9
RNF139-201ENST00000303545 RSPH10BP0C881 870 aa20.64■□□□□ 0.9
RNF139-201ENST00000303545 SPATA31C1P0DKV0 1188 aa20.64■□□□□ 0.9
RNF139-201ENST00000303545 FKBP3Q00688 224 aaKnown RBP20.64■□□□□ 0.9
RNF139-201ENST00000303545 AP3B2Q13367 1082 aa20.64■□□□□ 0.9
RNF139-201ENST00000303545 CACNA2D4Q7Z3S7 1137 aa20.64■□□□□ 0.9
RNF139-201ENST00000303545 SLFN12Q8IYM2 578 aa20.64■□□□□ 0.9
RNF139-201ENST00000303545 GLT8D2Q9H1C3 349 aa20.64■□□□□ 0.9
RNF139-201ENST00000303545 A0A1W2PQJ5 194 aa20.64■□□□□ 0.89
RNF139-201ENST00000303545 MMS19Q96T76 1030 aa20.64■□□□□ 0.89
RNF139-201ENST00000303545 ZCCHC17Q9NP64 241 aaKnown RBP20.64■□□□□ 0.89
RNF139-201ENST00000303545 SFI1A8K8P3 1242 aa20.63■□□□□ 0.89
RNF139-201ENST00000303545 EML1O00423 815 aa20.63■□□□□ 0.89
RNF139-201ENST00000303545 PSMD14O00487 310 aa20.63■□□□□ 0.89
RNF139-201ENST00000303545 ARID5AQ03989 594 aa20.63■□□□□ 0.89
RNF139-201ENST00000303545 SPA17Q15506 151 aa20.63■□□□□ 0.89
RNF139-201ENST00000303545 CCDC170Q8IYT3 715 aa20.63■□□□□ 0.89
RNF139-201ENST00000303545 NEK11Q8NG66 645 aa20.63■□□□□ 0.89
RNF139-201ENST00000303545 NAP1L4Q99733 375 aaKnown RBP20.63■□□□□ 0.89
RNF139-201ENST00000303545 HINFPQ9BQA5 517 aa20.63■□□□□ 0.89
RNF139-201ENST00000303545 PLAGL2Q9UPG8 496 aa20.63■□□□□ 0.89
RNF139-201ENST00000303545 ZBTB39O15060 712 aa20.63■□□□□ 0.89
RNF139-201ENST00000303545 KIF11P52732 1056 aa20.63■□□□□ 0.89
RNF139-201ENST00000303545 WHAMMP3Q1A5X7 153 aa20.63■□□□□ 0.89
RNF139-201ENST00000303545 LONRF2Q1L5Z9 754 aa20.63■□□□□ 0.89
RNF139-201ENST00000303545 ZNF771Q7L3S4 317 aaPredicted RBP20.63■□□□□ 0.89
RNF139-201ENST00000303545 TRAPPC11Q7Z392 1133 aa20.63■□□□□ 0.89
RNF139-201ENST00000303545 REEP2Q9BRK0 252 aa20.63■□□□□ 0.89
RNF139-201ENST00000303545 IFIH1Q9BYX4 1025 aaKnown RBP20.63■□□□□ 0.89
RNF139-201ENST00000303545 AKR1B10O60218 316 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 ENTPD3O75355 529 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 GFPT1Q06210 699 aaPredicted RBP20.62■□□□□ 0.89
RNF139-201ENST00000303545 FIGNQ5HY92 759 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 SFR1Q86XK3 245 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 PIGOQ8TEQ8 1089 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 BAP1Q92560 729 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 MBOAT7Q96N66 472 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 PSMB7Q99436 277 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 LSM14BQ9BX40 385 aaKnown RBP20.62■□□□□ 0.89
RNF139-201ENST00000303545 TMEM39BQ9GZU3 492 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 IKZF4Q9H2S9 585 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 MOCS3O95396 460 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 SREBF1P36956 1147 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 STAT2P52630 851 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 VSNL1P62760 191 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 KIF5AQ12840 1032 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms