RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 ECEL1O95672 775 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 PHKA1P46020 1223 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 EPHB4P54760 987 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 TTC30AQ86WT1 665 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.36□□□□□ -0.27
ABCA3-201ENST00000301732 HESX1Q9UBX0 185 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 SUGT1Q9Y2Z0 365 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 CD109Q6YHK3 1445 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 TOM1O60784 492 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 GRAMD4Q6IC98 578 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 KDELC2Q7Z4H8 507 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 RNF135Q8IUD6 432 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 SH2D4AQ9H788 454 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 ORC6Q9Y5N6 252 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 SCINQ9Y6U3 715 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 IBTKQ9P2D0 1353 aaPredicted RBP13.36□□□□□ -0.27
ABCA3-201ENST00000301732 OTULINQ96BN8 352 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 NR1H4Q96RI1 486 aaPredicted RBP13.36□□□□□ -0.27
ABCA3-201ENST00000301732 PCDHB6Q9Y5E3 794 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 ENO4A6NNW6 628 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 RASGRF2O14827 1237 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 HOXA13P31271 388 aaPredicted RBP13.36□□□□□ -0.27
ABCA3-201ENST00000301732 PSMD2Q13200 908 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 CDKL2Q92772 493 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 CCDC51Q96ER9 411 aa13.36□□□□□ -0.27
ABCA3-201ENST00000301732 EIF3CLB5ME19 914 aaKnown RBP13.35□□□□□ -0.27
ABCA3-201ENST00000301732 PIK3R2O00459 728 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 MMEP08473 750 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 CAPRIN1Q14444 709 aaKnown RBP13.35□□□□□ -0.27
ABCA3-201ENST00000301732 RPGRIP1Q96KN7 1286 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 EIF3CQ99613 913 aaKnown RBP13.35□□□□□ -0.27
ABCA3-201ENST00000301732 OSBPL1AQ9BXW6 950 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 SLC38A10Q9HBR0 1119 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 ZSWIM6Q9HCJ5 1215 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 NEURL1BA8MQ27 555 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 EVI5O60447 810 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 DKC1O60832 514 aaKnown RBP eCLIP13.35□□□□□ -0.27
ABCA3-201ENST00000301732 GNA14O95837 355 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 SLFN14P0C7P3 912 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 SLC9A5Q14940 896 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 RSRC2Q7L4I2 434 aaKnown RBP13.35□□□□□ -0.27
ABCA3-201ENST00000301732 RFWD2Q8NHY2 731 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 DTX3LQ8TDB6 740 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 ORAI2Q96SN7 254 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 POLR3CQ9BUI4 534 aaPredicted RBP13.35□□□□□ -0.27
ABCA3-201ENST00000301732 NT5C3AQ9H0P0 336 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 HADHAP40939 763 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 ZMYND12Q9H0C1 365 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 ADAMTS1Q9UHI8 967 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 INO80B-WBP1J3KQ70 363 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 PFKFB2O60825 505 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 S100BP04271 92 aaPredicted RBP13.35□□□□□ -0.27
ABCA3-201ENST00000301732 P4HA1P13674 534 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 PDE6AP16499 860 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 DNMBPQ6XZF7 1577 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 SLC13A1Q9BZW2 595 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 INO80BQ9C086 356 aaPredicted RBP13.35□□□□□ -0.27
ABCA3-201ENST00000301732 PALM3A6NDB9 673 aaPredicted RBP13.35□□□□□ -0.27
ABCA3-201ENST00000301732 PRPSAP1Q14558 356 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 CCDC124Q96CT7 223 aaKnown RBP13.35□□□□□ -0.27
ABCA3-201ENST00000301732 DYNLL2Q96FJ2 89 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 DACH2Q96NX9 599 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 FLT4P35916 1363 aa13.35□□□□□ -0.27
ABCA3-201ENST00000301732 SOS2Q07890 1332 aaPredicted RBP13.34□□□□□ -0.27
ABCA3-201ENST00000301732 SOX5P35711 763 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 BTDP43251 543 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 DR1Q01658 176 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 SPATS2Q86XZ4 545 aaKnown RBP13.34□□□□□ -0.27
ABCA3-201ENST00000301732 SAYSD1Q9NPB0 183 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 A0A087WUV0 522 aaPredicted RBP13.34□□□□□ -0.27
ABCA3-201ENST00000301732 FGGP02679 453 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 NUMBP49757 651 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 GFPT1Q06210 699 aaPredicted RBP13.34□□□□□ -0.27
ABCA3-201ENST00000301732 SRRM1Q8IYB3 904 aaKnown RBP13.34□□□□□ -0.27
ABCA3-201ENST00000301732 PALMDQ9NP74 551 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 SARS2Q9NP81 518 aaKnown RBP13.34□□□□□ -0.27
ABCA3-201ENST00000301732 CCDC78A2IDD5 438 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 PTK2Q05397 1052 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 PROSER3Q2NL68 480 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 PPP6R3Q5H9R7 873 aaPredicted RBP13.34□□□□□ -0.27
ABCA3-201ENST00000301732 FBXW10Q5XX13 1052 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 OR6B2Q6IFH4 312 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 USP17L2Q6R6M4 530 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 ENOX1Q8TC92 643 aaKnown RBP13.34□□□□□ -0.27
ABCA3-201ENST00000301732 MAGI1Q96QZ7 1491 aaPredicted RBP13.34□□□□□ -0.27
ABCA3-201ENST00000301732 PPIP5K2O43314 1243 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 MAGOHP61326 146 aaKnown RBP13.34□□□□□ -0.27
ABCA3-201ENST00000301732 MUM1L1Q5H9M0 696 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 ARHGEF18Q6ZSZ5 1173 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 PDCD6IPQ8WUM4 868 aaKnown RBP13.34□□□□□ -0.27
ABCA3-201ENST00000301732 PITPNM3Q9BZ71 974 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 LARSQ9P2J5 1176 aaKnown RBP13.34□□□□□ -0.27
ABCA3-201ENST00000301732 PCDHA1Q9Y5I3 950 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 CARMIL3Q8ND23 1372 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 GOLGA8RI6L899 631 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 CTTNQ14247 550 aaKnown RBP13.34□□□□□ -0.27
ABCA3-201ENST00000301732 FBXO11Q86XK2 927 aa13.34□□□□□ -0.27
ABCA3-201ENST00000301732 PRDM5Q9NQX1 630 aaPredicted RBP13.34□□□□□ -0.27
ABCA3-201ENST00000301732 GTPBP10A4D1E9 387 aaKnown RBP13.34□□□□□ -0.27
ABCA3-201ENST00000301732 GYG2O15488 501 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms