RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 PSMD1Q99460 953 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 MTFR1LQ9H019 292 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 CPVLQ9H3G5 476 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.03□□□□□ -0.48
SNX20-201ENST00000300590 FBXO3Q9UK99 471 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 TRPC6Q9Y210 931 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 THRAP3Q9Y2W1 955 aaKnown RBP12.03□□□□□ -0.48
SNX20-201ENST00000300590 CNTNAP5Q8WYK1 1306 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 RIC1Q4ADV7 1423 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 MARF1Q9Y4F3 1742 aaKnown RBP12.03□□□□□ -0.48
SNX20-201ENST00000300590 USP17L12C9JPN9 530 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 USP17L21D6R901 530 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 PPIP5K2O43314 1243 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 SLC5A1P13866 664 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 ARID4AP29374 1257 aaPredicted RBP12.03□□□□□ -0.48
SNX20-201ENST00000300590 CTSWP56202 376 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 IRX1P78414 480 aaPredicted RBP12.03□□□□□ -0.48
SNX20-201ENST00000300590 KLHL30Q0D2K2 578 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 BIRC3Q13489 604 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 NBPF20Q3BBV1 942 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 THEMIS2Q5TEJ8 643 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 EMC10Q5UCC4 262 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 ARL6IP4Q66PJ3 421 aaKnown RBP12.03□□□□□ -0.48
SNX20-201ENST00000300590 LRRC34Q8IZ02 419 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 RNF10Q8N5U6 811 aaKnown RBP12.03□□□□□ -0.48
SNX20-201ENST00000300590 LSM14BQ9BX40 385 aaKnown RBP12.03□□□□□ -0.48
SNX20-201ENST00000300590 RNF14Q9UBS8 474 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 MAGEB6P1A0A0J9YX57 407 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 GRID2IPA4D2P6 1211 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 ORC4O43929 436 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 TLR2O60603 784 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 GNAT2P19087 354 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 ECHS1P30084 290 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 SNX1Q13596 522 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 MAN2A1Q16706 1144 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 FIGNQ5HY92 759 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 MEI1Q5TIA1 1274 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 SAAL1Q96ER3 474 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 TRIM51Q9BSJ1 452 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 ABCF3Q9NUQ8 709 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 C15orf41Q9Y2V0 281 aa12.03□□□□□ -0.48
SNX20-201ENST00000300590 MEGF6O75095 1541 aa12.02□□□□□ -0.48
SNX20-201ENST00000300590 TRAF5O00463 557 aa12.02□□□□□ -0.49
SNX20-201ENST00000300590 CCDC38Q502W7 563 aa12.02□□□□□ -0.49
SNX20-201ENST00000300590 FAM83BQ5T0W9 1011 aa12.02□□□□□ -0.49
SNX20-201ENST00000300590 HGSNATQ68CP4 663 aa12.02□□□□□ -0.49
SNX20-201ENST00000300590 ZSCAN29Q8IWY8 852 aaPredicted RBP12.02□□□□□ -0.49
SNX20-201ENST00000300590 VGLL2Q8N8G2 317 aa12.02□□□□□ -0.49
SNX20-201ENST00000300590 SPDYE1Q8NFV5 336 aaPredicted RBP12.02□□□□□ -0.49
SNX20-201ENST00000300590 HOOK2Q96ED9 719 aa12.02□□□□□ -0.49
SNX20-201ENST00000300590 MLXIPLQ9NP71 852 aa12.02□□□□□ -0.49
SNX20-201ENST00000300590 SAMD15Q9P1V8 674 aa12.02□□□□□ -0.49
SNX20-201ENST00000300590 PJA2O43164 708 aa12.02□□□□□ -0.49
SNX20-201ENST00000300590 CCNT1O60563 726 aaKnown RBP12.02□□□□□ -0.49
SNX20-201ENST00000300590 SHBGP04278 402 aa12.02□□□□□ -0.49
SNX20-201ENST00000300590 HNRNPH3P31942 346 aaKnown RBP12.02□□□□□ -0.49
SNX20-201ENST00000300590 TRAPPC10P48553 1259 aa12.02□□□□□ -0.49
SNX20-201ENST00000300590 NAB2Q15742 525 aa12.02□□□□□ -0.49
SNX20-201ENST00000300590 GRIPAP1Q4V328 841 aa12.02□□□□□ -0.49
SNX20-201ENST00000300590 DAAM2Q86T65 1068 aa12.02□□□□□ -0.49
SNX20-201ENST00000300590 DNAJC10Q8IXB1 793 aa12.02□□□□□ -0.49
SNX20-201ENST00000300590 PRMT1Q99873 361 aaKnown RBP12.02□□□□□ -0.49
SNX20-201ENST00000300590 KDM4CQ9H3R0 1056 aa12.02□□□□□ -0.49
SNX20-201ENST00000300590 LUC7LQ9NQ29 371 aaKnown RBP12.02□□□□□ -0.49
SNX20-201ENST00000300590 AGAP1Q9UPQ3 857 aa12.02□□□□□ -0.49
SNX20-201ENST00000300590 ARFGEF2Q9Y6D5 1785 aa12.01□□□□□ -0.49
SNX20-201ENST00000300590 KIF3CO14782 793 aa12.01□□□□□ -0.49
SNX20-201ENST00000300590 DNAJC8O75937 253 aaPredicted RBP12.01□□□□□ -0.49
SNX20-201ENST00000300590 TXKP42681 527 aa12.01□□□□□ -0.49
SNX20-201ENST00000300590 LRRC14Q15048 493 aa12.01□□□□□ -0.49
SNX20-201ENST00000300590 LRIG3Q6UXM1 1119 aa12.01□□□□□ -0.49
SNX20-201ENST00000300590 NELFCDQ8IXH7 590 aa12.01□□□□□ -0.49
SNX20-201ENST00000300590 WTIPA6NIX2 430 aaPredicted RBP12.01□□□□□ -0.49
SNX20-201ENST00000300590 TSPY2A6NKD2 308 aa12.01□□□□□ -0.49
SNX20-201ENST00000300590 KCNMA1Q12791 1236 aa12.01□□□□□ -0.49
SNX20-201ENST00000300590 PPP2R5BQ15173 497 aa12.01□□□□□ -0.49
SNX20-201ENST00000300590 LACTB2Q53H82 288 aaPredicted RBP12.01□□□□□ -0.49
SNX20-201ENST00000300590 CNNM4Q6P4Q7 775 aa12.01□□□□□ -0.49
SNX20-201ENST00000300590 ANKS1AQ92625 1134 aa12.01□□□□□ -0.49
SNX20-201ENST00000300590 SWAP70Q9UH65 585 aa12.01□□□□□ -0.49
SNX20-201ENST00000300590 UBOX5O94941 541 aa12.01□□□□□ -0.49
SNX20-201ENST00000300590 IFI35P80217 286 aaPredicted RBP12.01□□□□□ -0.49
SNX20-201ENST00000300590 PFKFB3Q16875 520 aaPredicted RBP12.01□□□□□ -0.49
SNX20-201ENST00000300590 ASTE1Q2TB18 679 aaPredicted RBP12.01□□□□□ -0.49
SNX20-201ENST00000300590 DZIP3Q86Y13 1208 aaKnown RBP12.01□□□□□ -0.49
SNX20-201ENST00000300590 KSR1Q8IVT5 923 aa12.01□□□□□ -0.49
SNX20-201ENST00000300590 MAGEC3Q8TD91 643 aa12.01□□□□□ -0.49
SNX20-201ENST00000300590 DYDC1Q8WWB3 177 aa12.01□□□□□ -0.49
SNX20-201ENST00000300590 ZNF570Q96NI8 536 aa12.01□□□□□ -0.49
SNX20-201ENST00000300590 KAT6BQ8WYB5 2073 aa12□□□□□ -0.49
SNX20-201ENST00000300590 LCA5LO95447 670 aa12□□□□□ -0.49
SNX20-201ENST00000300590 EPS15P42566 896 aa12□□□□□ -0.49
SNX20-201ENST00000300590 GNPTABQ3T906 1256 aa12□□□□□ -0.49
SNX20-201ENST00000300590 VAT1LQ9HCJ6 419 aa12□□□□□ -0.49
SNX20-201ENST00000300590 INTS9Q9NV88 658 aaKnown RBP12□□□□□ -0.49
SNX20-201ENST00000300590 NOP53Q9NZM5 478 aaKnown RBP12□□□□□ -0.49
SNX20-201ENST00000300590 TRIM33Q9UPN9 1127 aa12□□□□□ -0.49
SNX20-201ENST00000300590 NOC2LQ9Y3T9 749 aaKnown RBP12□□□□□ -0.49
SNX20-201ENST00000300590 UBR1Q8IWV7 1749 aa12□□□□□ -0.49
SNX20-201ENST00000300590 EVI5O60447 810 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms