RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 FGFR2P21802 821 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 ANKRD20A8PQ5CZ79 823 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 USP17L1Q7RTZ2 530 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 DYNLL2Q96FJ2 89 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 OSBPL7Q9BZF2 842 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 TFCP2L1Q9NZI6 479 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 ATRNO75882 1429 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 USP17L8P0C7I0 530 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 TNNI2P48788 182 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 DRP2Q13474 957 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 BIRC3Q13489 604 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 CALCRLQ16602 461 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 NEK8Q86SG6 692 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 TBCKQ8TEA7 893 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 PIGBQ92521 554 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 CELF4Q9BZC1 486 aaKnown RBP12.49□□□□□ -0.41
TRUB1-201ENST00000298746 PNMA2Q9UL42 364 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 ARFGEF2Q9Y6D5 1785 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 POTEMA6NI47 508 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 WTIPA6NIX2 430 aaPredicted RBP12.49□□□□□ -0.41
TRUB1-201ENST00000298746 CUL1Q13616 776 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 HERC4Q5GLZ8 1057 aaPredicted RBP12.49□□□□□ -0.41
TRUB1-201ENST00000298746 TEX11Q8IYF3 940 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 PSMD1Q99460 953 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 MCM8Q9UJA3 840 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 SIK3Q9Y2K2 1263 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 ATP6V0A2Q9Y487 856 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 COL4A3BPQ9Y5P4 624 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 MYMKA6NI61 221 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 KLRF2D3W0D1 207 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 TTI1O43156 1089 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 MMEP08473 750 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 GNA11P29992 359 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 FKBP3Q00688 224 aaKnown RBP12.48□□□□□ -0.41
TRUB1-201ENST00000298746 ZNF844Q08AG5 666 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 PLCB4Q15147 1175 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 KRT25Q7Z3Z0 450 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 AK8Q96MA6 479 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 NUCKS1Q9H1E3 243 aaKnown RBP12.48□□□□□ -0.41
TRUB1-201ENST00000298746 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRUB1-201ENST00000298746 SPEF2Q9C093 1822 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 MYH6P13533 1939 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 SSU72P8A0A1W2PR75 194 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 RGS16O15492 202 aaPredicted RBP12.48□□□□□ -0.41
TRUB1-201ENST00000298746 ABCB4P21439 1286 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 PLTPP55058 493 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 NAB2Q15742 525 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 SUSD4Q5VX71 490 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 DDX12PQ92771 950 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 ZNF622Q969S3 477 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRUB1-201ENST00000298746 CHMP6Q96FZ7 201 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 ISCUQ9H1K1 167 aa12.48□□□□□ -0.41
TRUB1-201ENST00000298746 GRID2IPA4D2P6 1211 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 DCDC2CA8MYV0 355 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 RASSF9O75901 435 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 CDC25CP30307 473 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 HOOK3Q86VS8 718 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 C4orf32Q8N8J7 132 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 GLIS3Q8NEA6 775 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 ANKS1AQ92625 1134 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 MAGEF1Q9HAY2 307 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 NOD2Q9HC29 1040 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 PLCB1Q9NQ66 1216 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 INTS9Q9NV88 658 aaKnown RBP12.47□□□□□ -0.41
TRUB1-201ENST00000298746 CEP72Q9P209 647 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 SAP30BPQ9UHR5 308 aaKnown RBP12.47□□□□□ -0.41
TRUB1-201ENST00000298746 NOC2LQ9Y3T9 749 aaKnown RBP12.47□□□□□ -0.41
TRUB1-201ENST00000298746 L3MBTL1Q9Y468 752 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 MYH2Q9UKX2 1941 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 TRAPPC3O43617 180 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 TRIM37O94972 964 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 HSPA9P38646 679 aaKnown RBP12.47□□□□□ -0.41
TRUB1-201ENST00000298746 SLC18A3Q16572 532 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 SPRED3Q2MJR0 410 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 NAIF1Q69YI7 327 aaPredicted RBP12.47□□□□□ -0.41
TRUB1-201ENST00000298746 PIK3R5Q8WYR1 880 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 C7orf25Q9BPX7 421 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 SPDYE3A6NKU9 549 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 LAD1O00515 517 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 KIF4AO95239 1232 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 FAM26FQ5R3K3 315 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 DENND2CQ68D51 928 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 CENPPQ6IPU0 288 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 ALKBH5Q6P6C2 394 aaKnown RBP12.47□□□□□ -0.41
TRUB1-201ENST00000298746 UNC13DQ70J99 1090 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 ZSCAN29Q8IWY8 852 aaPredicted RBP12.47□□□□□ -0.41
TRUB1-201ENST00000298746 REXO1Q8N1G1 1221 aaKnown RBP12.47□□□□□ -0.41
TRUB1-201ENST00000298746 U2AF1L4Q8WU68 220 aaKnown RBP12.47□□□□□ -0.41
TRUB1-201ENST00000298746 NSMCE1Q8WV22 266 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 LMBR1Q8WVP7 490 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 SPDL1Q96EA4 605 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 FMO2Q99518 471 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 TRIM51Q9BSJ1 452 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 BRIP1Q9BX63 1249 aa12.47□□□□□ -0.41
TRUB1-201ENST00000298746 DCP1AQ9NPI6 582 aaPredicted RBP12.47□□□□□ -0.41
TRUB1-201ENST00000298746 A1CFQ9NQ94 594 aaKnown RBP12.47□□□□□ -0.41
TRUB1-201ENST00000298746 ITGA4P13612 1032 aa12.46□□□□□ -0.41
TRUB1-201ENST00000298746 TNFRSF8P28908 595 aa12.46□□□□□ -0.41
TRUB1-201ENST00000298746 FLT3P36888 993 aa12.46□□□□□ -0.41
TRUB1-201ENST00000298746 LRRC63Q05C16 580 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms