RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 MEIS2O14770 477 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 TNPO2O14787 897 aaKnown RBP6.79□□□□□ -1.32
SSX3-201ENST00000298396 CPLX1O14810 134 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 EDIL3O43854 480 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 DEXIO95424 95 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 HOXA13P31271 388 aaPredicted RBP6.79□□□□□ -1.32
SSX3-201ENST00000298396 MCM2P49736 904 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 FCGRTP55899 365 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 RPS6P62753 249 aaKnown RBP6.79□□□□□ -1.32
SSX3-201ENST00000298396 CCNA1P78396 465 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 BAATQ14032 418 aaPredicted RBP6.79□□□□□ -1.32
SSX3-201ENST00000298396 UBE2SQ16763 222 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 ZNF792Q3KQV3 632 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 ABRAQ8N0Z2 381 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 IL31RAQ8NI17 732 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 SYTL5Q8TDW5 730 aaPredicted RBP6.79□□□□□ -1.32
SSX3-201ENST00000298396 ERO1AQ96HE7 468 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 MMP19Q99542 508 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 LLPHQ9BRT6 129 aaKnown RBP6.79□□□□□ -1.32
SSX3-201ENST00000298396 PPP1R12CQ9BZL4 782 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 ORC3Q9UBD5 711 aaPredicted RBP6.79□□□□□ -1.32
SSX3-201ENST00000298396 SRRDQ9UH36 339 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 KCNJ14Q9UNX9 436 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 KAT6AQ92794 2004 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 RPTORQ8N122 1335 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 ESYT2A0FGR8 921 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 hCG_1984214I3L0E3 225 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 ATP9BO43861 1147 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 LZTS3O60299 673 aaPredicted RBP6.78□□□□□ -1.32
SSX3-201ENST00000298396 CDKL5O76039 1030 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 AVPP01185 164 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 NR3C2P08235 984 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 HOXC6P09630 235 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 FCER1AP12319 257 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 FSHRP23945 695 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 GJB2P29033 226 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 COPB2P35606 906 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 FLT3LGP49771 235 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 NAPAP54920 295 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 MAP7D1Q3KQU3 841 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 EARS2Q5JPH6 523 aaKnown RBP6.78□□□□□ -1.32
SSX3-201ENST00000298396 WDR78Q5VTH9 848 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 USP17L6PQ6QN14 398 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 NSMFQ6X4W1 530 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 CYP4X1Q8N118 509 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 ZNF713Q8N859 430 aaPredicted RBP6.78□□□□□ -1.32
SSX3-201ENST00000298396 RGS22Q8NE09 1264 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 TRPV1Q8NER1 839 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 RASGRP4Q8TDF6 673 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 TRIB2Q92519 343 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 TNFRSF25Q93038 417 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 PGBD1Q96JS3 809 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 TAAR1Q96RJ0 339 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 PHF20Q9BVI0 1012 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 KATNBL1Q9H079 304 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 ZMYND12Q9H0C1 365 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 RIC8AQ9NPQ8 531 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 PRDM10Q9NQV6 1147 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 TMEM260Q9NX78 707 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 SEC63Q9UGP8 760 aaKnown RBP6.78□□□□□ -1.32
SSX3-201ENST00000298396 FBXO40Q9UH90 709 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 MRPL11Q9Y3B7 192 aaKnown RBP6.78□□□□□ -1.32
SSX3-201ENST00000298396 TRIM17Q9Y577 477 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 CTDP1Q9Y5B0 961 aaPredicted RBP6.78□□□□□ -1.32
SSX3-201ENST00000298396 PTCH2Q9Y6C5 1203 aa6.78□□□□□ -1.32
SSX3-201ENST00000298396 PFASO15067 1338 aa6.77□□□□□ -1.32
SSX3-201ENST00000298396 SMCO2A6NFE2 343 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 KIF28PB7ZC32 967 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 J3QL48 77 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 NRG2O14511 850 aaPredicted RBP6.77□□□□□ -1.33
SSX3-201ENST00000298396 STRNO43815 780 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 CFBP00751 764 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 ELNP15502 786 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 CYP2B6P20813 491 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 CALML3P27482 149 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 ALDH5A1P51649 535 aaPredicted RBP6.77□□□□□ -1.33
SSX3-201ENST00000298396 ADCY7P51828 1080 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 GUCY1B3Q02153 619 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 DHX9Q08211 1270 aaKnown RBP6.77□□□□□ -1.33
SSX3-201ENST00000298396 KRT40Q6A162 431 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 RNF207Q6ZRF8 634 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 CTU1Q7Z7A3 348 aaKnown RBP6.77□□□□□ -1.33
SSX3-201ENST00000298396 RNF135Q8IUD6 432 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 HSCBQ8IWL3 235 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 TRIM22Q8IYM9 498 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 CCDC116Q8IYX3 515 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 ANKRD35Q8N283 1001 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 PLPP7Q8NBV4 271 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 DAGLBQ8NCG7 672 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 MORC4Q8TE76 937 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 CRYGNQ8WXF5 182 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 MAML3Q96JK9 1138 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 APBA2Q99767 749 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 ALG1Q9BT22 464 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 SH3GLB2Q9NR46 395 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 PTPN22Q9Y2R2 807 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 MAFBQ9Y5Q3 323 aaPredicted RBP6.77□□□□□ -1.33
SSX3-201ENST00000298396 SCN10AQ9Y5Y9 1956 aa6.77□□□□□ -1.33
SSX3-201ENST00000298396 ARID2Q68CP9 1835 aa6.76□□□□□ -1.33
SSX3-201ENST00000298396 DNAH12Q6ZR08 3092 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms