RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 PTGISQ16647 500 aa13.76□□□□□ -0.21
CAGE1-201ENST00000296742 MYCBPAPQ8TBZ2 947 aa13.76□□□□□ -0.21
CAGE1-201ENST00000296742 PCMTD1Q96MG8 357 aaPredicted RBP13.76□□□□□ -0.21
CAGE1-201ENST00000296742 NHEJ1Q9H9Q4 299 aaPredicted RBP13.76□□□□□ -0.21
CAGE1-201ENST00000296742 ZNHIT6Q9NWK9 470 aaKnown RBP13.76□□□□□ -0.21
CAGE1-201ENST00000296742 SEC63Q9UGP8 760 aaKnown RBP13.76□□□□□ -0.21
CAGE1-201ENST00000296742 GDAQ9Y2T3 454 aa13.76□□□□□ -0.21
CAGE1-201ENST00000296742 ESYT3A0FGR9 886 aa13.76□□□□□ -0.21
CAGE1-201ENST00000296742 ATP2C2O75185 946 aa13.76□□□□□ -0.21
CAGE1-201ENST00000296742 CLNS1AP54105 237 aaKnown RBP13.76□□□□□ -0.21
CAGE1-201ENST00000296742 C8orf74Q6P047 294 aa13.76□□□□□ -0.21
CAGE1-201ENST00000296742 NFRKBQ6P4R8 1299 aa13.76□□□□□ -0.21
CAGE1-201ENST00000296742 KRT26Q7Z3Y9 468 aa13.76□□□□□ -0.21
CAGE1-201ENST00000296742 YTHDF3Q7Z739 585 aaKnown RBP13.76□□□□□ -0.21
CAGE1-201ENST00000296742 GPIHBP1Q8IV16 184 aa13.76□□□□□ -0.21
CAGE1-201ENST00000296742 LRWD1Q9UFC0 647 aa13.76□□□□□ -0.21
CAGE1-201ENST00000296742 DDX20Q9UHI6 824 aaKnown RBP13.76□□□□□ -0.21
CAGE1-201ENST00000296742 CAPN6Q9Y6Q1 641 aa13.76□□□□□ -0.21
CAGE1-201ENST00000296742 H0YIN7 160 aa13.75□□□□□ -0.21
CAGE1-201ENST00000296742 RXRBP28702 533 aa13.75□□□□□ -0.21
CAGE1-201ENST00000296742 VAV2P52735 878 aa13.75□□□□□ -0.21
CAGE1-201ENST00000296742 GABPAQ06546 454 aa13.75□□□□□ -0.21
CAGE1-201ENST00000296742 KDM7AQ6ZMT4 941 aa13.75□□□□□ -0.21
CAGE1-201ENST00000296742 CCDC121Q6ZUS5 278 aa13.75□□□□□ -0.21
CAGE1-201ENST00000296742 IFT81Q8WYA0 676 aa13.75□□□□□ -0.21
CAGE1-201ENST00000296742 FAXDC2Q96IV6 333 aa13.75□□□□□ -0.21
CAGE1-201ENST00000296742 GOLGA6L7A0A1B0GV03 622 aa13.75□□□□□ -0.21
CAGE1-201ENST00000296742 DDTLA6NHG4 134 aaPredicted RBP13.75□□□□□ -0.21
CAGE1-201ENST00000296742 SHMT1P34896 483 aa13.75□□□□□ -0.21
CAGE1-201ENST00000296742 GUCY2FP51841 1108 aa13.75□□□□□ -0.21
CAGE1-201ENST00000296742 CCDC178Q5BJE1 867 aa13.75□□□□□ -0.21
CAGE1-201ENST00000296742 HAUS3Q68CZ6 603 aa13.75□□□□□ -0.21
CAGE1-201ENST00000296742 GJA10Q969M2 543 aa13.75□□□□□ -0.21
CAGE1-201ENST00000296742 MLXIPQ9HAP2 919 aa13.75□□□□□ -0.21
CAGE1-201ENST00000296742 CAPN11Q9UMQ6 739 aa13.75□□□□□ -0.21
CAGE1-201ENST00000296742 NFU1Q9UMS0 254 aa13.75□□□□□ -0.21
CAGE1-201ENST00000296742 ZSCAN5CA6NGD5 496 aaPredicted RBP13.74□□□□□ -0.21
CAGE1-201ENST00000296742 ZNF233A6NK53 670 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 ECE2O60344 883 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 BMP15O95972 392 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 RPSAP08865 295 aaKnown RBP13.74□□□□□ -0.21
CAGE1-201ENST00000296742 KLK7P49862 253 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 ZNF772Q68DY9 489 aaPredicted RBP13.74□□□□□ -0.21
CAGE1-201ENST00000296742 DTHD1Q6ZMT9 781 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 TMC4Q7Z404 712 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 MOCS3O95396 460 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 FAM153BP0C7A2 387 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 EZRP15311 586 aaKnown RBP13.74□□□□□ -0.21
CAGE1-201ENST00000296742 TRAPPC10P48553 1259 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 FAM153CQ494X1 144 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 WLSQ5T9L3 541 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 NAIF1Q69YI7 327 aaPredicted RBP13.74□□□□□ -0.21
CAGE1-201ENST00000296742 CYB5D1Q6P9G0 228 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 PARP9Q8IXQ6 854 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 DHX37Q8IY37 1157 aaKnown RBP13.74□□□□□ -0.21
CAGE1-201ENST00000296742 TBCKQ8TEA7 893 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 LRRC15Q8TF66 581 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 DNAJC18Q9H819 358 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 SH3GLB2Q9NR46 395 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 HAUS2Q9NVX0 235 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 FAM153AQ9UHL3 310 aa13.74□□□□□ -0.21
CAGE1-201ENST00000296742 LGALS16A8MUM7 142 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 B4DLN1 442 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 PPP1R12AO14974 1030 aaPredicted RBP13.73□□□□□ -0.21
CAGE1-201ENST00000296742 TACC1O75410 805 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 STAT6P42226 847 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 PRCPP42785 496 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 DNA2P51530 1060 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 SNAP25P60880 206 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 SPA17Q15506 151 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 SOGA3Q5TF21 947 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 IRF2BP1Q8IU81 584 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 OSBPL9Q96SU4 736 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 SPZ1Q9BXG8 430 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 ZMYND12Q9H0C1 365 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 NCK2O43639 380 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 MDH1P40925 334 aaKnown RBP13.73□□□□□ -0.21
CAGE1-201ENST00000296742 TECP42680 631 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 CARSP49589 748 aaKnown RBP13.73□□□□□ -0.21
CAGE1-201ENST00000296742 NAA25Q14CX7 972 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 UBE2SQ16763 222 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 SPRED3Q2MJR0 410 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 PDXDC2PQ6P474 469 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 MAATS1Q7Z4T9 603 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 TRIM58Q8NG06 486 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 TDRD3Q9H7E2 651 aaKnown RBP13.73□□□□□ -0.21
CAGE1-201ENST00000296742 LTBP1Q14766 1721 aa13.73□□□□□ -0.21
CAGE1-201ENST00000296742 GDF11O95390 407 aa13.72□□□□□ -0.21
CAGE1-201ENST00000296742 FAM107AO95990 144 aa13.72□□□□□ -0.21
CAGE1-201ENST00000296742 PAFAH1B1P43034 410 aa13.72□□□□□ -0.21
CAGE1-201ENST00000296742 FUKQ8N0W3 1084 aa13.72□□□□□ -0.21
CAGE1-201ENST00000296742 CAVIN3Q969G5 261 aa13.72□□□□□ -0.21
CAGE1-201ENST00000296742 TRIM6Q9C030 488 aaPredicted RBP13.72□□□□□ -0.21
CAGE1-201ENST00000296742 RBM12Q9NTZ6 932 aaKnown RBP13.72□□□□□ -0.21
CAGE1-201ENST00000296742 COL11A2P13942 1736 aaPredicted RBP13.72□□□□□ -0.21
CAGE1-201ENST00000296742 BACH1O14867 736 aa13.72□□□□□ -0.21
CAGE1-201ENST00000296742 PPP1R12BO60237 982 aaPredicted RBP13.72□□□□□ -0.21
CAGE1-201ENST00000296742 SKAP2O75563 359 aaPredicted RBP13.72□□□□□ -0.21
CAGE1-201ENST00000296742 TTLL1O95922 423 aa13.72□□□□□ -0.21
CAGE1-201ENST00000296742 PLEKP08567 350 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms