RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 ATP9AO75110 1047 aa13.76□□□□□ -0.21
HMGB2-201ENST00000296503 MDM2Q00987 491 aaPredicted RBP13.76□□□□□ -0.21
HMGB2-201ENST00000296503 SP4Q02446 784 aa13.76□□□□□ -0.21
HMGB2-201ENST00000296503 CEP55Q53EZ4 464 aa13.76□□□□□ -0.21
HMGB2-201ENST00000296503 METTL7BQ6UX53 244 aa13.76□□□□□ -0.21
HMGB2-201ENST00000296503 BLIDQ8IZY5 108 aa13.76□□□□□ -0.21
HMGB2-201ENST00000296503 SLC43A3Q8NBI5 491 aa13.76□□□□□ -0.21
HMGB2-201ENST00000296503 PPP1R13LQ8WUF5 828 aa13.76□□□□□ -0.21
HMGB2-201ENST00000296503 ALG1Q9BT22 464 aa13.76□□□□□ -0.21
HMGB2-201ENST00000296503 RRAGDQ9NQL2 400 aaPredicted RBP13.76□□□□□ -0.21
HMGB2-201ENST00000296503 PDLIM7Q9NR12 457 aa13.76□□□□□ -0.21
HMGB2-201ENST00000296503 COLQQ9Y215 455 aaPredicted RBP13.76□□□□□ -0.21
HMGB2-201ENST00000296503 DNAH12Q6ZR08 3092 aa13.76□□□□□ -0.21
HMGB2-201ENST00000296503 RAG1P15918 1043 aa13.76□□□□□ -0.21
HMGB2-201ENST00000296503 GALNT17Q6IS24 598 aa13.76□□□□□ -0.21
HMGB2-201ENST00000296503 CCDC83Q8IWF9 413 aa13.76□□□□□ -0.21
HMGB2-201ENST00000296503 KCNH7Q9NS40 1196 aa13.76□□□□□ -0.21
HMGB2-201ENST00000296503 TRIM43BA6NCK2 446 aa13.75□□□□□ -0.21
HMGB2-201ENST00000296503 CYP3A4P08684 503 aa13.75□□□□□ -0.21
HMGB2-201ENST00000296503 ARP10275 920 aa13.75□□□□□ -0.21
HMGB2-201ENST00000296503 FDPSP14324 419 aaKnown RBP13.75□□□□□ -0.21
HMGB2-201ENST00000296503 MAGEA10P43363 369 aaPredicted RBP13.75□□□□□ -0.21
HMGB2-201ENST00000296503 PLA2G4DQ86XP0 818 aa13.75□□□□□ -0.21
HMGB2-201ENST00000296503 FAM126BQ8IXS8 530 aa13.75□□□□□ -0.21
HMGB2-201ENST00000296503 FAM177A1Q8N128 213 aaPredicted RBP13.75□□□□□ -0.21
HMGB2-201ENST00000296503 NSUN7Q8NE18 718 aaKnown RBP13.75□□□□□ -0.21
HMGB2-201ENST00000296503 TRIM43Q96BQ3 446 aaPredicted RBP13.75□□□□□ -0.21
HMGB2-201ENST00000296503 TBC1D32Q96NH3 1257 aa13.75□□□□□ -0.21
HMGB2-201ENST00000296503 TRPV6Q9H1D0 765 aa13.75□□□□□ -0.21
HMGB2-201ENST00000296503 GJB4Q9NTQ9 266 aa13.75□□□□□ -0.21
HMGB2-201ENST00000296503 MEIS1O00470 390 aa13.74□□□□□ -0.21
HMGB2-201ENST00000296503 JAK2O60674 1132 aa13.74□□□□□ -0.21
HMGB2-201ENST00000296503 ZNF286BP0CG31 522 aa13.74□□□□□ -0.21
HMGB2-201ENST00000296503 KCNA2P16389 499 aa13.74□□□□□ -0.21
HMGB2-201ENST00000296503 PSEN2P49810 448 aa13.74□□□□□ -0.21
HMGB2-201ENST00000296503 KAT2BQ92831 832 aa13.74□□□□□ -0.21
HMGB2-201ENST00000296503 KATNAL1Q9BW62 490 aa13.74□□□□□ -0.21
HMGB2-201ENST00000296503 SH2B1Q9NRF2 756 aaPredicted RBP13.74□□□□□ -0.21
HMGB2-201ENST00000296503 KIAA0355O15063 1070 aa13.74□□□□□ -0.21
HMGB2-201ENST00000296503 CD4P01730 458 aa13.74□□□□□ -0.21
HMGB2-201ENST00000296503 UTP14CQ5TAP6 766 aaKnown RBP13.74□□□□□ -0.21
HMGB2-201ENST00000296503 NFRKBQ6P4R8 1299 aa13.74□□□□□ -0.21
HMGB2-201ENST00000296503 C7orf31Q8N865 590 aa13.74□□□□□ -0.21
HMGB2-201ENST00000296503 DAGLBQ8NCG7 672 aa13.74□□□□□ -0.21
HMGB2-201ENST00000296503 BADQ92934 168 aa13.74□□□□□ -0.21
HMGB2-201ENST00000296503 GPR20Q99678 358 aa13.74□□□□□ -0.21
HMGB2-201ENST00000296503 GDF15Q99988 308 aa13.74□□□□□ -0.21
HMGB2-201ENST00000296503 SDF4Q9BRK5 362 aa13.74□□□□□ -0.21
HMGB2-201ENST00000296503 PHF20Q9BVI0 1012 aa13.74□□□□□ -0.21
HMGB2-201ENST00000296503 UBE2OQ9C0C9 1292 aaKnown RBP13.74□□□□□ -0.21
HMGB2-201ENST00000296503 FAM86B1E9PN63 330 aa13.73□□□□□ -0.21
HMGB2-201ENST00000296503 B4GALT4O60513 344 aa13.73□□□□□ -0.21
HMGB2-201ENST00000296503 FAM86B2P0C5J1 330 aa13.73□□□□□ -0.21
HMGB2-201ENST00000296503 SUPT20HL2P0C7V6 817 aa13.73□□□□□ -0.21
HMGB2-201ENST00000296503 USP11P51784 963 aa13.73□□□□□ -0.21
HMGB2-201ENST00000296503 FOSBP53539 338 aa13.73□□□□□ -0.21
HMGB2-201ENST00000296503 PTPN11Q06124 597 aaPredicted RBP13.73□□□□□ -0.21
HMGB2-201ENST00000296503 TRIM29Q14134 588 aa13.73□□□□□ -0.21
HMGB2-201ENST00000296503 MFSD10Q14728 455 aa13.73□□□□□ -0.21
HMGB2-201ENST00000296503 KIAA0753Q2KHM9 967 aa13.73□□□□□ -0.21
HMGB2-201ENST00000296503 NIPA1Q7RTP0 329 aa13.73□□□□□ -0.21
HMGB2-201ENST00000296503 TBCKQ8TEA7 893 aa13.73□□□□□ -0.21
HMGB2-201ENST00000296503 CRYGNQ8WXF5 182 aa13.73□□□□□ -0.21
HMGB2-201ENST00000296503 SEPT1Q8WYJ6 367 aa13.73□□□□□ -0.21
HMGB2-201ENST00000296503 UIMC1Q96RL1 719 aa13.73□□□□□ -0.21
HMGB2-201ENST00000296503 AGO4Q9HCK5 861 aaKnown RBP13.73□□□□□ -0.21
HMGB2-201ENST00000296503 TRMT13Q9NUP7 481 aaKnown RBP13.73□□□□□ -0.21
HMGB2-201ENST00000296503 NOD1Q9Y239 953 aa13.73□□□□□ -0.21
HMGB2-201ENST00000296503 GOLGA6L3A6NEY3 463 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 H3BRB1 525 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 HOXD8P13378 290 aaPredicted RBP13.72□□□□□ -0.21
HMGB2-201ENST00000296503 ST3GAL1Q11201 340 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 PRR16Q569H4 304 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 KRT25Q7Z3Z0 450 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 LLPHQ9BRT6 129 aaKnown RBP13.72□□□□□ -0.21
HMGB2-201ENST00000296503 C16orf70Q9BSU1 422 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 PPP1R12CQ9BZL4 782 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 TUT1Q9H6E5 874 aaKnown RBP13.72□□□□□ -0.21
HMGB2-201ENST00000296503 BRMS1Q9HCU9 246 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 SLC9A2Q9UBY0 812 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 TELO2Q9Y4R8 837 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 CCDC194A0A1B0GVG4 234 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 F2P00734 622 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 TIMP1P01033 207 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 LGALS2P05162 132 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 ITGB8P26012 769 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 TCF7P36402 384 aaPredicted RBP13.72□□□□□ -0.21
HMGB2-201ENST00000296503 MRE11P49959 708 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 NONOQ15233 471 aaKnown RBP eCLIP13.72□□□□□ -0.211e-8■■■■□ 20.3
HMGB2-201ENST00000296503 NPY5RQ15761 445 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 ZNF577Q9BSK1 485 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 JPH1Q9HDC5 661 aaPredicted RBP13.72□□□□□ -0.21
HMGB2-201ENST00000296503 HDAC6Q9UBN7 1215 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 TBX21Q9UL17 535 aa13.72□□□□□ -0.21
HMGB2-201ENST00000296503 DOCK5Q9H7D0 1870 aa13.71□□□□□ -0.21
HMGB2-201ENST00000296503 IGLV3-22A0A075B6J6 115 aa13.71□□□□□ -0.21
HMGB2-201ENST00000296503 GSTTP1A0A1W2PQM5 241 aa13.71□□□□□ -0.21
HMGB2-201ENST00000296503 M0R2N6 131 aa13.71□□□□□ -0.21
HMGB2-201ENST00000296503 DDX39AO00148 427 aaKnown RBP13.71□□□□□ -0.21
HMGB2-201ENST00000296503 CYP2C9P11712 490 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms