RNA–Protein interactions for RNA: ENST00000288447.8

DMD-201, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 3,856 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-201ENST00000288447 UPF2Q9HAU5 1272 aaKnown RBP3.67□□□□□ -1.82
DMD-201ENST00000288447 PDE11AQ9HCR9 933 aa3.67□□□□□ -1.82
DMD-201ENST00000288447 ZNHIT6Q9NWK9 470 aaKnown RBP3.67□□□□□ -1.82
DMD-201ENST00000288447 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.67□□□□□ -1.82
DMD-201ENST00000288447 ZIM2Q9NZV7 527 aa3.67□□□□□ -1.82
DMD-201ENST00000288447 RGS17Q9UGC6 210 aaPredicted RBP3.67□□□□□ -1.82
DMD-201ENST00000288447 OR5K4A6NMS3 321 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 RASA4BC9J798 803 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 ALDH1A2O94788 518 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 PLGP00747 810 aaPredicted RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 PHKA1P46020 1223 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 UBE2IP63279 158 aaKnown RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 CCNA1P78396 465 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 SKOR1P84550 965 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 EHHADHQ08426 723 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 TBC1D8BQ0IIM8 1120 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 SLMAPQ14BN4 828 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 SAFBQ15424 915 aaKnown RBP eCLIP3.66□□□□□ -1.82
DMD-201ENST00000288447 CCNG2Q16589 344 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 TMEM266Q2M3C6 531 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 ANKS3Q6ZW76 656 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 NLRP8Q86W28 1048 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 MYLK4Q86YV6 388 aaPredicted RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 SLC44A2Q8IWA5 706 aaPredicted RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 FAM133AQ8N9E0 248 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 DCAF11Q8TEB1 546 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 ZNF483Q8TF39 744 aaPredicted RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 ATP2A3Q93084 1043 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 KIFC2Q96AC6 838 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 CGREF1Q99674 301 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 RSRP1Q9BUV0 290 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 WDR12Q9GZL7 423 aaKnown RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 INTS10Q9NVR2 710 aaKnown RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 GDAP2Q9NXN4 497 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 CROTQ9UKG9 612 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 GMEB1Q9Y692 573 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 FLT1P17948 1338 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 IQANK1A0A1B0GTG1 560 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 LSM1O15116 133 aaKnown RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 AXIN1O15169 862 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 TLR3O15455 904 aaKnown RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 RASA4O43374 803 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 TSPAN1O60635 241 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 MC4RP32245 332 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 NASPP49321 788 aaPredicted RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 GBE1Q04446 702 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 BTKQ06187 659 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 CACNB2Q08289 660 aaPredicted RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 RNASEH2BQ5TBB1 312 aaKnown RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 ANGPTL8Q6UXH0 198 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 PACS2Q86VP3 889 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 SCYL3Q8IZE3 742 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 PDCD7Q8N8D1 485 aaKnown RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 MFSD2AQ8NA29 543 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 OR6P1Q8NGX9 317 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 CTCFLQ8NI51 663 aaPredicted RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 ARHGAP45Q92619 1136 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 PPP2R3CQ969Q6 453 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 SNF8Q96H20 258 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 TCF25Q9BQ70 676 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 CCDC87Q9NVE4 849 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 ADAMTS1Q9UHI8 967 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 ADGRE2Q9UHX3 823 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 SCAF8Q9UPN6 1271 aaKnown RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 DAAM1Q9Y4D1 1078 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 PCDHB4Q9Y5E5 795 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 ERICH4A6NGS2 130 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 TMCO5BA8MYB1 307 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 RTCAO00442 366 aaKnown RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 STX6O43752 255 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 PDE8AO60658 829 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 CST3P01034 146 aaPredicted RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 MT-ND3P03897 115 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 HSPA1AP0DMV8 641 aaKnown RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 HSPA1BP0DMV9 641 aaKnown RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 MTHFD1P11586 935 aaKnown RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 EIF4BP23588 611 aaKnown RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 ATP6V1AP38606 617 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 NR2C2P49116 596 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 GTF2A1P52655 376 aaPredicted RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 ARFIP1P53367 373 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 TUBA1BP68363 451 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 TMF1P82094 1093 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 MRPS35P82673 323 aaKnown RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 SMUG1Q53HV7 270 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 TRIM72Q6ZMU5 477 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 CCDC149Q6ZUS6 474 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 TUBA1AQ71U36 451 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 HS2ST1Q7LGA3 356 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 WDR75Q8IWA0 830 aaKnown RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 CCDC65Q8IXS2 484 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 AFAP1Q8N556 730 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 DCLK2Q8N568 766 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 TSPYL6Q8N831 410 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 USP13Q92995 863 aaPredicted RBP3.66□□□□□ -1.82
DMD-201ENST00000288447 DNAJC7Q99615 494 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 INCENPQ9NQS7 918 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 TBC1D14Q9P2M4 693 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 JRKLQ9Y4A0 524 aa3.66□□□□□ -1.82
DMD-201ENST00000288447 ZFP37Q9Y6Q3 630 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms