RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 ENOX2Q16206 610 aaKnown RBP14.6□□□□□ -0.07
SLC28A1-201ENST00000286749 UBE2SQ16763 222 aa14.6□□□□□ -0.07
SLC28A1-201ENST00000286749 LRRC47Q8N1G4 583 aaKnown RBP14.6□□□□□ -0.07
SLC28A1-201ENST00000286749 CCDC43Q96MW1 224 aaKnown RBP14.6□□□□□ -0.07
SLC28A1-201ENST00000286749 GDF3Q9NR23 364 aa14.6□□□□□ -0.07
SLC28A1-201ENST00000286749 PANK4Q9NVE7 773 aa14.6□□□□□ -0.07
SLC28A1-201ENST00000286749 ATP6V0A2Q9Y487 856 aa14.6□□□□□ -0.07
SLC28A1-201ENST00000286749 FAM169AQ9Y6X4 670 aa14.6□□□□□ -0.07
SLC28A1-201ENST00000286749 ARFGEF1Q9Y6D6 1849 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 ATAD5Q96QE3 1844 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 A0A087WUV0 522 aaPredicted RBP14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 RGL2O15211 777 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 GNPATO15228 680 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 RAPGEF1Q13905 1077 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 NAB2Q15742 525 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 FAM26FQ5R3K3 315 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 NELFCDQ8IXH7 590 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 TBC1D5Q92609 795 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 FAM107BQ9H098 131 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 GPCPD1Q9NPB8 672 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 GPR75-ASB3A0A0A6YYF3 556 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 hCG_1984214I3L0E3 225 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 ATP1A2P50993 1020 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 GUCY2FP51841 1108 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 EIF6P56537 245 aaKnown RBP14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 RNASE9P60153 205 aaKnown RBP14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 SKOR1P84550 965 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 PAK2Q13177 524 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 PTF1AQ7RTS3 328 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 MICALL1Q8N3F8 863 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 ZNF713Q8N859 430 aaPredicted RBP14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 SYN2Q92777 582 aaPredicted RBP14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 UIMC1Q96RL1 719 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 KRT12Q99456 494 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 NUCKS1Q9H1E3 243 aaKnown RBP14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 POLD4Q9HCU8 107 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 RNF14Q9UBS8 474 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 SAMM50Q9Y512 469 aa14.59□□□□□ -0.07
SLC28A1-201ENST00000286749 A0A087X0T9 212 aa14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 FAM228BP0C875 321 aa14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 CFAP58Q5T655 872 aa14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 ARHGAP27Q6ZUM4 889 aa14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 CLEC10AQ8IUN9 316 aa14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 PACSIN1Q9BY11 444 aa14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 LUC7LQ9NQ29 371 aaKnown RBP14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 RPS6KA4O75676 772 aa14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 CPP00450 1065 aa14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 LIG3P49916 1009 aa14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 GRAPQ13588 217 aa14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 SLC18A3Q16572 532 aa14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 MEI1Q5TIA1 1274 aa14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 FOXR2Q6PJQ5 311 aa14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 GRAPLQ8TC17 118 aaPredicted RBP14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 HAS1Q92839 578 aa14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 DDX25Q9UHL0 483 aaKnown RBP14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.58□□□□□ -0.08
SLC28A1-201ENST00000286749 ZNF233A6NK53 670 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 MARCH6O60337 910 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 HOXA7P31268 230 aaPredicted RBP14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 NOVP48745 357 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 RHBDL3P58872 404 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 CACNB1Q02641 598 aaPredicted RBP14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 KIAA0753Q2KHM9 967 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 AMIGO3Q86WK7 504 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 IQCKQ8N0W5 287 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 FAM133AQ8N9E0 248 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 CASKIN2Q8WXE0 1202 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 PCDHGC5Q9Y5F6 944 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 NPHP3-ACAD11A0A0J9YXS1 232 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 E9PMD0 336 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 KLHL30Q0D2K2 578 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 TRADDQ15628 312 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 ASPRV1Q53RT3 343 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 CERS3Q8IU89 383 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 TRIM59Q8IWR1 403 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 CEP63Q96MT8 703 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 INPP4AQ96PE3 977 aaPredicted RBP14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 ADAMTS1Q9UHI8 967 aa14.57□□□□□ -0.08
SLC28A1-201ENST00000286749 GRID2IPA4D2P6 1211 aa14.56□□□□□ -0.08
SLC28A1-201ENST00000286749 SEPT2Q15019 361 aa14.56□□□□□ -0.08
SLC28A1-201ENST00000286749 PPP4R3AQ6IN85 833 aa14.56□□□□□ -0.08
SLC28A1-201ENST00000286749 PIK3R5Q8WYR1 880 aa14.56□□□□□ -0.08
SLC28A1-201ENST00000286749 CD209Q9NNX6 404 aa14.56□□□□□ -0.08
SLC28A1-201ENST00000286749 MTMR4Q9NYA4 1195 aa14.56□□□□□ -0.08
SLC28A1-201ENST00000286749 FOCADQ5VW36 1801 aa14.56□□□□□ -0.08
SLC28A1-201ENST00000286749 AHDC1Q5TGY3 1603 aaPredicted RBP14.56□□□□□ -0.08
SLC28A1-201ENST00000286749 PPP1R11O60927 126 aaPredicted RBP14.56□□□□□ -0.08
SLC28A1-201ENST00000286749 PLCG2P16885 1265 aa14.56□□□□□ -0.08
SLC28A1-201ENST00000286749 GPSM2P81274 684 aa14.56□□□□□ -0.08
SLC28A1-201ENST00000286749 ASIC2Q16515 512 aa14.56□□□□□ -0.08
SLC28A1-201ENST00000286749 BMP2KQ9NSY1 1161 aaPredicted RBP14.56□□□□□ -0.08
SLC28A1-201ENST00000286749 NDUFAB1O14561 156 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 ZEB2O60315 1214 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 ERLIN2O94905 339 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 ICE2Q659A1 982 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 BARGINQ6ZT62 677 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 KLHL7Q8IXQ5 586 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 RNPC3Q96LT9 517 aaKnown RBP14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 JMJD4Q9H9V9 463 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms