RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 KDM7AQ6ZMT4 941 aa30.26■■■□□ 2.43
CBX4-201ENST00000269397 NBPF5PQ86XG9 351 aaPredicted RBP30.26■■■□□ 2.43
CBX4-201ENST00000269397 MYO1FO00160 1098 aa30.25■■■□□ 2.43
CBX4-201ENST00000269397 MEI1Q5TIA1 1274 aa30.25■■■□□ 2.43
CBX4-201ENST00000269397 INPP4AQ96PE3 977 aaPredicted RBP30.25■■■□□ 2.43
CBX4-201ENST00000269397 CEP85LQ5SZL2 805 aa30.25■■■□□ 2.43
CBX4-201ENST00000269397 SUGP1Q8IWZ8 645 aaKnown RBP30.25■■■□□ 2.43
CBX4-201ENST00000269397 PLAAQ9Y263 795 aa30.25■■■□□ 2.43
CBX4-201ENST00000269397 HLTFQ14527 1009 aaKnown RBP eCLIP30.24■■■□□ 2.436e-7■□□□□ 8.6
CBX4-201ENST00000269397 NAA35Q5VZE5 725 aa30.24■■■□□ 2.43
CBX4-201ENST00000269397 OTUD6BQ8N6M0 293 aa30.24■■■□□ 2.43
CBX4-201ENST00000269397 RIC8AQ9NPQ8 531 aa30.24■■■□□ 2.43
CBX4-201ENST00000269397 NPHP3-ACAD11A0A0J9YXS1 232 aa30.24■■■□□ 2.43
CBX4-201ENST00000269397 GRID2IPA4D2P6 1211 aa30.24■■■□□ 2.43
CBX4-201ENST00000269397 KLHL30Q0D2K2 578 aa30.24■■■□□ 2.43
CBX4-201ENST00000269397 SLC18A3Q16572 532 aa30.24■■■□□ 2.43
CBX4-201ENST00000269397 UBE2SQ16763 222 aa30.24■■■□□ 2.43
CBX4-201ENST00000269397 ZCWPW2Q504Y3 356 aa30.24■■■□□ 2.43
CBX4-201ENST00000269397 B4GALNT4Q76KP1 1039 aa30.24■■■□□ 2.43
CBX4-201ENST00000269397 OR2W6PQ8NHA6 318 aa30.24■■■□□ 2.43
CBX4-201ENST00000269397 DNAJC19Q96DA6 116 aa30.24■■■□□ 2.43
CBX4-201ENST00000269397 PANK4Q9NVE7 773 aa30.24■■■□□ 2.43
CBX4-201ENST00000269397 RNF14Q9UBS8 474 aa30.24■■■□□ 2.43
CBX4-201ENST00000269397 KIAA0754O94854 1291 aa30.23■■■□□ 2.43
CBX4-201ENST00000269397 EIF6P56537 245 aaKnown RBP30.23■■■□□ 2.43
CBX4-201ENST00000269397 SLC10A5Q5PT55 438 aa30.23■■■□□ 2.43
CBX4-201ENST00000269397 EDEM3Q9BZQ6 932 aa30.23■■■□□ 2.43
CBX4-201ENST00000269397 KCNK3O14649 394 aa30.23■■■□□ 2.43
CBX4-201ENST00000269397 CDC37Q16543 378 aaPredicted RBP30.23■■■□□ 2.43
CBX4-201ENST00000269397 DDX42Q86XP3 938 aaKnown RBP eCLIP30.23■■■□□ 2.431e-6■■■■□ 20.6
CBX4-201ENST00000269397 EPN3Q9H201 632 aa30.23■■■□□ 2.43
CBX4-201ENST00000269397 UTP18Q9Y5J1 556 aaKnown RBP eCLIP30.23■■■□□ 2.43
CBX4-201ENST00000269397 SNED1Q8TER0 1413 aa30.23■■■□□ 2.43
CBX4-201ENST00000269397 MNAT1P51948 309 aa30.22■■■□□ 2.43
CBX4-201ENST00000269397 FAM26FQ5R3K3 315 aa30.22■■■□□ 2.43
CBX4-201ENST00000269397 MCTP2Q6DN12 878 aa30.22■■■□□ 2.43
CBX4-201ENST00000269397 CLEC10AQ8IUN9 316 aa30.22■■■□□ 2.43
CBX4-201ENST00000269397 ATP6V1G3Q96LB4 118 aa30.22■■■□□ 2.43
CBX4-201ENST00000269397 RAB34Q9BZG1 259 aa30.22■■■□□ 2.43
CBX4-201ENST00000269397 PCDHGC5Q9Y5F6 944 aa30.22■■■□□ 2.43
CBX4-201ENST00000269397 H0YHG0 523 aa30.21■■■□□ 2.43
CBX4-201ENST00000269397 ADCY7P51828 1080 aa30.21■■■□□ 2.43
CBX4-201ENST00000269397 IRX3P78415 501 aaPredicted RBP30.21■■■□□ 2.43
CBX4-201ENST00000269397 USP38Q8NB14 1042 aa30.21■■■□□ 2.43
CBX4-201ENST00000269397 PPP1R37O75864 691 aa30.21■■■□□ 2.43
CBX4-201ENST00000269397 ACTN1P12814 892 aa30.21■■■□□ 2.43
CBX4-201ENST00000269397 HDLBPQ00341 1268 aaKnown RBP30.21■■■□□ 2.43
CBX4-201ENST00000269397 NEDD1Q8NHV4 660 aa30.21■■■□□ 2.43
CBX4-201ENST00000269397 WDR66Q8TBY9 1149 aa30.21■■■□□ 2.43
CBX4-201ENST00000269397 ZNF473Q8WTR7 871 aaKnown RBP30.21■■■□□ 2.43
CBX4-201ENST00000269397 LUC7LQ9NQ29 371 aaKnown RBP30.21■■■□□ 2.43
CBX4-201ENST00000269397 MEFVO15553 781 aaPredicted RBP30.2■■■□□ 2.43
CBX4-201ENST00000269397 BTDP43251 543 aa30.2■■■□□ 2.43
CBX4-201ENST00000269397 PTGISQ16647 500 aa30.2■■■□□ 2.43
CBX4-201ENST00000269397 TMEM119Q4V9L6 283 aa30.2■■■□□ 2.43
CBX4-201ENST00000269397 PROM2Q8N271 834 aa30.2■■■□□ 2.43
CBX4-201ENST00000269397 SETDB2Q96T68 719 aa30.2■■■□□ 2.43
CBX4-201ENST00000269397 E9PMD0 336 aa30.2■■■□□ 2.43
CBX4-201ENST00000269397 MARCH6O60337 910 aa30.2■■■□□ 2.43
CBX4-201ENST00000269397 ERVK-9P63128 1117 aa30.2■■■□□ 2.43
CBX4-201ENST00000269397 PSMD2Q13200 908 aa30.2■■■□□ 2.43
CBX4-201ENST00000269397 RNF187Q5TA31 235 aaPredicted RBP30.2■■■□□ 2.43
CBX4-201ENST00000269397 LRRC47Q8N1G4 583 aaKnown RBP30.2■■■□□ 2.43
CBX4-201ENST00000269397 AP1M1Q9BXS5 423 aa30.2■■■□□ 2.43
CBX4-201ENST00000269397 GPCPD1Q9NPB8 672 aa30.2■■■□□ 2.43
CBX4-201ENST00000269397 MREGQ8N565 214 aa30.19■■■□□ 2.42
CBX4-201ENST00000269397 CCT8L2Q96SF2 557 aa30.19■■■□□ 2.42
CBX4-201ENST00000269397 ZHX3Q9H4I2 956 aa30.19■■■□□ 2.42
CBX4-201ENST00000269397 PPANQ9NQ55 473 aaKnown RBP30.19■■■□□ 2.42
CBX4-201ENST00000269397 IRS2Q9Y4H2 1338 aa30.19■■■□□ 2.42
CBX4-201ENST00000269397 C16orf86Q6ZW13 317 aa30.19■■■□□ 2.42
CBX4-201ENST00000269397 A6NNZ2 444 aa30.19■■■□□ 2.42
CBX4-201ENST00000269397 E7EVH7 732 aa30.19■■■□□ 2.42
CBX4-201ENST00000269397 MDH1P40925 334 aaKnown RBP30.19■■■□□ 2.42
CBX4-201ENST00000269397 PDIA5Q14554 519 aa30.19■■■□□ 2.42
CBX4-201ENST00000269397 TUBB8Q3ZCM7 444 aa30.19■■■□□ 2.42
CBX4-201ENST00000269397 WHAMMQ8TF30 809 aa30.19■■■□□ 2.42
CBX4-201ENST00000269397 TAF4BQ92750 862 aa30.19■■■□□ 2.42
CBX4-201ENST00000269397 MAST2Q6P0Q8 1798 aa30.18■■■□□ 2.42
CBX4-201ENST00000269397 EPS15P42566 896 aa30.18■■■□□ 2.42
CBX4-201ENST00000269397 ITGB3BPQ13352 177 aaPredicted RBP30.18■■■□□ 2.42
CBX4-201ENST00000269397 ASIC2Q16515 512 aa30.18■■■□□ 2.42
CBX4-201ENST00000269397 TRIM59Q8IWR1 403 aa30.18■■■□□ 2.42
CBX4-201ENST00000269397 TEX11Q8IYF3 940 aa30.18■■■□□ 2.42
CBX4-201ENST00000269397 SYN2Q92777 582 aaPredicted RBP30.18■■■□□ 2.42
CBX4-201ENST00000269397 RTFDC1Q9BY42 306 aaPredicted RBP30.18■■■□□ 2.42
CBX4-201ENST00000269397 NUCKS1Q9H1E3 243 aaKnown RBP30.18■■■□□ 2.42
CBX4-201ENST00000269397 TNNC1P63316 161 aa30.18■■■□□ 2.42
CBX4-201ENST00000269397 NFIXQ14938 502 aa30.18■■■□□ 2.42
CBX4-201ENST00000269397 NLRP14Q86W24 1093 aa30.18■■■□□ 2.42
CBX4-201ENST00000269397 MYCBPAPQ8TBZ2 947 aa30.18■■■□□ 2.42
CBX4-201ENST00000269397 HAS1Q92839 578 aa30.18■■■□□ 2.42
CBX4-201ENST00000269397 ZNF287Q9HBT7 754 aa30.18■■■□□ 2.42
CBX4-201ENST00000269397 CEP104O60308 925 aa30.17■■■□□ 2.42
CBX4-201ENST00000269397 PDHBP11177 359 aa30.17■■■□□ 2.42
CBX4-201ENST00000269397 FNTAP49354 379 aa30.17■■■□□ 2.42
CBX4-201ENST00000269397 PPP4CP60510 307 aa30.17■■■□□ 2.42
CBX4-201ENST00000269397 GSTO1P78417 241 aa30.17■■■□□ 2.42
CBX4-201ENST00000269397 PTK2Q05397 1052 aa30.17■■■□□ 2.42
CBX4-201ENST00000269397 RPS6KA1Q15418 735 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms