RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 MED24O75448 989 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 KCNK18Q7Z418 384 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 SHCBP1Q8NEM2 672 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 GPRASP2Q96D09 838 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 INPP4AQ96PE3 977 aaPredicted RBP15.8■□□□□ 0.12
SS18-201ENST00000269137 HSD17B14Q9BPX1 270 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 TBC1D22BQ9NU19 505 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 KIAA1024Q9UPX6 916 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 POTEB3A0JP26 581 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 SMTNL1A8MU46 457 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 GOLGA6L19H0YKK7 550 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 DHX15O43143 795 aaKnown RBP15.8■□□□□ 0.12
SS18-201ENST00000269137 KLRC4O43908 158 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 MUTP22033 750 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 ERVK-9P63128 1117 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 ERVK-24P63145 666 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 CCDC173Q0VFZ6 552 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 MCM6Q14566 821 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 Q3C1V9 767 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 POTEBQ6S5H4 581 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 NLRX1Q86UT6 975 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 PDLIM2Q96JY6 352 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 PPP1R9BQ96SB3 815 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 EIF2AK1Q9BQI3 630 aaKnown RBP15.8■□□□□ 0.12
SS18-201ENST00000269137 MROH8Q9H579 483 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 TUFT1Q9NNX1 390 aa15.8■□□□□ 0.12
SS18-201ENST00000269137 PASKQ96RG2 1323 aa15.79■□□□□ 0.12
SS18-201ENST00000269137 TESPA1A2RU30 521 aaPredicted RBP15.79■□□□□ 0.12
SS18-201ENST00000269137 CYP2C8P10632 490 aa15.79■□□□□ 0.12
SS18-201ENST00000269137 GCLCP48506 637 aaPredicted RBP15.79■□□□□ 0.12
SS18-201ENST00000269137 MKRN3Q13064 507 aaKnown RBP15.79■□□□□ 0.12
SS18-201ENST00000269137 EPHA7Q15375 998 aa15.79■□□□□ 0.12
SS18-201ENST00000269137 AOPEPQ8N6M6 819 aa15.79■□□□□ 0.12
SS18-201ENST00000269137 FAM133AQ8N9E0 248 aa15.79■□□□□ 0.12
SS18-201ENST00000269137 GTPBP4Q9BZE4 634 aaKnown RBP15.79■□□□□ 0.12
SS18-201ENST00000269137 UNC45AQ9H3U1 944 aa15.79■□□□□ 0.12
SS18-201ENST00000269137 ADD3Q9UEY8 706 aaKnown RBP15.79■□□□□ 0.12
SS18-201ENST00000269137 POTEB2H3BUK9 544 aa15.78■□□□□ 0.12
SS18-201ENST00000269137 RHOBTB3O94955 611 aa15.78■□□□□ 0.12
SS18-201ENST00000269137 ERCC5P28715 1186 aaPredicted RBP15.78■□□□□ 0.12
SS18-201ENST00000269137 ITGB3BPQ13352 177 aaPredicted RBP15.78■□□□□ 0.12
SS18-201ENST00000269137 NCAPHQ15003 741 aa15.78■□□□□ 0.12
SS18-201ENST00000269137 ZNF658Q5TYW1 1059 aaPredicted RBP15.78■□□□□ 0.12
SS18-201ENST00000269137 SMCR8Q8TEV9 937 aaPredicted RBP15.78■□□□□ 0.12
SS18-201ENST00000269137 CDHR1Q96JP9 859 aa15.78■□□□□ 0.12
SS18-201ENST00000269137 MYMKA6NI61 221 aa15.78■□□□□ 0.12
SS18-201ENST00000269137 CNTN2Q02246 1040 aa15.78■□□□□ 0.12
SS18-201ENST00000269137 KMT5BQ4FZB7 885 aa15.78■□□□□ 0.12
SS18-201ENST00000269137 GPRC5AQ8NFJ5 357 aa15.78■□□□□ 0.12
SS18-201ENST00000269137 NEK9Q8TD19 979 aa15.78■□□□□ 0.12
SS18-201ENST00000269137 CCDC47Q96A33 483 aaKnown RBP15.78■□□□□ 0.12
SS18-201ENST00000269137 MORF4L1Q9UBU8 362 aa15.78■□□□□ 0.12
SS18-201ENST00000269137 DNM3Q9UQ16 869 aa15.78■□□□□ 0.12
SS18-201ENST00000269137 ASTN1O14525 1302 aa15.77■□□□□ 0.12
SS18-201ENST00000269137 PVALEFA0A1B0GWK0 134 aa15.77■□□□□ 0.11
SS18-201ENST00000269137 POTEFA5A3E0 1075 aa15.77■□□□□ 0.11
SS18-201ENST00000269137 PPP1R3GB7ZBB8 358 aa15.77■□□□□ 0.11
SS18-201ENST00000269137 EIF3JO75822 258 aaKnown RBP15.77■□□□□ 0.11
SS18-201ENST00000269137 RGS20O76081 388 aa15.77■□□□□ 0.11
SS18-201ENST00000269137 SLITRK3O94933 977 aa15.77■□□□□ 0.11
SS18-201ENST00000269137 PLA2G4BP0C869 781 aa15.77■□□□□ 0.11
SS18-201ENST00000269137 EDNRBP24530 442 aa15.77■□□□□ 0.11
SS18-201ENST00000269137 ALDH5A1P51649 535 aaPredicted RBP15.77■□□□□ 0.11
SS18-201ENST00000269137 ASIC1P78348 528 aa15.77■□□□□ 0.11
SS18-201ENST00000269137 CCNA1P78396 465 aa15.77■□□□□ 0.11
SS18-201ENST00000269137 MYL5Q02045 173 aa15.77■□□□□ 0.11
SS18-201ENST00000269137 STXBP2Q15833 593 aa15.77■□□□□ 0.11
SS18-201ENST00000269137 POTEGQ6S5H5 508 aa15.77■□□□□ 0.11
SS18-201ENST00000269137 SAPCD2Q86UD0 394 aa15.77■□□□□ 0.11
SS18-201ENST00000269137 RASAL3Q86YV0 1011 aa15.77■□□□□ 0.11
SS18-201ENST00000269137 FAM43AQ8N2R8 423 aa15.77■□□□□ 0.11
SS18-201ENST00000269137 PTPN18Q99952 460 aa15.77■□□□□ 0.11
SS18-201ENST00000269137 RGL1Q9NZL6 768 aa15.77■□□□□ 0.11
SS18-201ENST00000269137 DNAJC25-GNG10A0A024R161 153 aa15.76■□□□□ 0.11
SS18-201ENST00000269137 SOWAHBA6NEL2 793 aa15.76■□□□□ 0.11
SS18-201ENST00000269137 E9PMD0 336 aa15.76■□□□□ 0.11
SS18-201ENST00000269137 CHMP2AO43633 222 aa15.76■□□□□ 0.11
SS18-201ENST00000269137 ZNF157P51786 506 aaPredicted RBP15.76■□□□□ 0.11
SS18-201ENST00000269137 SLC12A3P55017 1021 aa15.76■□□□□ 0.11
SS18-201ENST00000269137 DHX8Q14562 1220 aaKnown RBP15.76■□□□□ 0.11
SS18-201ENST00000269137 KCTD2Q14681 263 aa15.76■□□□□ 0.11
SS18-201ENST00000269137 GNPTABQ3T906 1256 aa15.76■□□□□ 0.11
SS18-201ENST00000269137 SARM1Q6SZW1 724 aa15.76■□□□□ 0.11
SS18-201ENST00000269137 UNC13DQ70J99 1090 aa15.76■□□□□ 0.11
SS18-201ENST00000269137 ENOX1Q8TC92 643 aaKnown RBP15.76■□□□□ 0.11
SS18-201ENST00000269137 PARK7Q99497 189 aaKnown RBP15.76■□□□□ 0.11
SS18-201ENST00000269137 R3HDMLQ9H3Y0 253 aa15.76■□□□□ 0.11
SS18-201ENST00000269137 GPBP1L1Q9HC44 474 aaPredicted RBP15.76■□□□□ 0.11
SS18-201ENST00000269137 BMP2KQ9NSY1 1161 aaPredicted RBP15.76■□□□□ 0.11
SS18-201ENST00000269137 KIAA1217Q5T5P2 1943 aa15.76■□□□□ 0.11
SS18-201ENST00000269137 B4DLN1 442 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 SPATA31C2B4DYI2 1134 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 AP5Z1O43299 807 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 ATP9AO75110 1047 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 CD44P16070 742 aaKnown RBP15.75■□□□□ 0.11
SS18-201ENST00000269137 ICAM3P32942 547 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 TPM4P67936 248 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 KRT76Q01546 638 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 CYP4A11Q02928 519 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 RGMBQ6NW40 437 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms