RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 CDC25AP30304 524 aa19.48■□□□□ 0.71
COL5A3-201ENST00000264828 KRT26Q7Z3Y9 468 aa19.48■□□□□ 0.71
COL5A3-201ENST00000264828 DNAAF3Q8N9W5 541 aa19.48■□□□□ 0.71
COL5A3-201ENST00000264828 THOC1Q96FV9 657 aaKnown RBP19.48■□□□□ 0.71
COL5A3-201ENST00000264828 UBE2TQ9NPD8 197 aaPredicted RBP19.48■□□□□ 0.71
COL5A3-201ENST00000264828 KRT82Q9NSB4 513 aa19.48■□□□□ 0.71
COL5A3-201ENST00000264828 PCDHA13Q9Y5I0 950 aa19.48■□□□□ 0.71
COL5A3-201ENST00000264828 ORC6Q9Y5N6 252 aa19.48■□□□□ 0.71
COL5A3-201ENST00000264828 NVLO15381 856 aaKnown RBP19.47■□□□□ 0.71
COL5A3-201ENST00000264828 MT-ND3P03897 115 aa19.47■□□□□ 0.71
COL5A3-201ENST00000264828 ATP2B4P23634 1241 aa19.47■□□□□ 0.71
COL5A3-201ENST00000264828 MCF2LO15068 1137 aa19.47■□□□□ 0.71
COL5A3-201ENST00000264828 CRKLP46109 303 aaKnown RBP19.47■□□□□ 0.71
COL5A3-201ENST00000264828 GYS2P54840 703 aa19.47■□□□□ 0.71
COL5A3-201ENST00000264828 MAML1Q92585 1016 aa19.47■□□□□ 0.71
COL5A3-201ENST00000264828 MAGEF1Q9HAY2 307 aa19.47■□□□□ 0.71
COL5A3-201ENST00000264828 ABCF3Q9NUQ8 709 aa19.47■□□□□ 0.71
COL5A3-201ENST00000264828 PPP1R12AO14974 1030 aaPredicted RBP19.47■□□□□ 0.71
COL5A3-201ENST00000264828 IQCB1Q15051 598 aa19.47■□□□□ 0.71
COL5A3-201ENST00000264828 PDCD2Q16342 344 aaPredicted RBP19.47■□□□□ 0.71
COL5A3-201ENST00000264828 MAN2A1Q16706 1144 aa19.47■□□□□ 0.71
COL5A3-201ENST00000264828 USPL1Q5W0Q7 1092 aa19.47■□□□□ 0.71
COL5A3-201ENST00000264828 ANKRD36BP1Q96IX9 119 aa19.47■□□□□ 0.71
COL5A3-201ENST00000264828 CCDC138Q96M89 665 aa19.47■□□□□ 0.71
COL5A3-201ENST00000264828 ATP8B1O43520 1251 aa19.47■□□□□ 0.71
COL5A3-201ENST00000264828 EEF1B2P24534 225 aaKnown RBP19.47■□□□□ 0.71
COL5A3-201ENST00000264828 NRBP2Q9NSY0 501 aa19.47■□□□□ 0.71
COL5A3-201ENST00000264828 SLC16A2P36021 539 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 KCTD6Q8NC69 237 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 MAP4K1Q92918 833 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 FGD4Q96M96 766 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 PLEKHF1Q96S99 279 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 SLC38A10Q9HBR0 1119 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 SRGAP2BP0DMP2 458 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 DYNLL1P63167 89 aaKnown RBP19.46■□□□□ 0.71
COL5A3-201ENST00000264828 ABCC12Q96J65 1359 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 MBD5Q9P267 1494 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 EIF3CLB5ME19 914 aaKnown RBP19.46■□□□□ 0.71
COL5A3-201ENST00000264828 BPIFB4P59827 614 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 RNASELQ05823 741 aaKnown RBP19.46■□□□□ 0.71
COL5A3-201ENST00000264828 EP400NLQ6ZTU2 488 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 EIF3CQ99613 913 aaKnown RBP19.46■□□□□ 0.71
COL5A3-201ENST00000264828 IKBKBO14920 756 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 PCCAP05165 728 aaPredicted RBP19.46■□□□□ 0.71
COL5A3-201ENST00000264828 ABCB5Q2M3G0 1257 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.46■□□□□ 0.71
COL5A3-201ENST00000264828 FAM160B1Q5W0V3 765 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 DEPDC1BQ8WUY9 529 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 FAM149B1Q96BN6 582 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 ABCB6Q9NP58 842 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 HDLBPQ00341 1268 aaKnown RBP19.46■□□□□ 0.71
COL5A3-201ENST00000264828 E2F4Q16254 413 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 TRIM42Q8IWZ5 723 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 RYBPQ8N488 228 aaPredicted RBP19.46■□□□□ 0.71
COL5A3-201ENST00000264828 N4BP2L2Q92802 583 aaPredicted RBP19.46■□□□□ 0.71
COL5A3-201ENST00000264828 TXLNGQ9NUQ3 528 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 BCS1LQ9Y276 419 aa19.46■□□□□ 0.71
COL5A3-201ENST00000264828 GOLGA8QA0A0J9YX86 632 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 GOLGA8OA6NCC3 632 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 GOLGA8NF8WBI6 632 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 KMT5AQ9NQR1 393 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 POLR3EQ9NVU0 708 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 SCOCQ9UIL1 159 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 AKT3Q9Y243 479 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 GOLGA8CPA6NN73 597 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 NR5A1Q13285 461 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 NR1D1P20393 614 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 CDR2Q01850 454 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 APOA5Q6Q788 366 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 TRMT10CQ7L0Y3 403 aaKnown RBP19.45■□□□□ 0.7
COL5A3-201ENST00000264828 CYTH2Q99418 400 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 CALN1Q9BXU9 219 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 SPDYE2BA6NHP3 402 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 SPDYE6P0CI01 402 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 TBCKQ8TEA7 893 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 ACCSQ96QU6 501 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 KIF9Q9HAQ2 790 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 CYP21A2P08686 494 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 SPOPLQ6IQ16 392 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 ZBTB33Q86T24 672 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 SPC25Q9HBM1 224 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 JRKLQ9Y4A0 524 aa19.45■□□□□ 0.7
COL5A3-201ENST00000264828 SOS2Q07890 1332 aaPredicted RBP19.45■□□□□ 0.7
COL5A3-201ENST00000264828 EXOC1LA0A1B0GW35 172 aa19.44■□□□□ 0.7
COL5A3-201ENST00000264828 C10orf76Q5T2E6 689 aa19.44■□□□□ 0.7
COL5A3-201ENST00000264828 TRIM11Q96F44 468 aa19.44■□□□□ 0.7
COL5A3-201ENST00000264828 INPP5FQ9Y2H2 1132 aa19.44■□□□□ 0.7
COL5A3-201ENST00000264828 DNAJC8O75937 253 aaPredicted RBP19.44■□□□□ 0.7
COL5A3-201ENST00000264828 GUCY2CP25092 1073 aa19.44■□□□□ 0.7
COL5A3-201ENST00000264828 CUEDC2Q9H467 287 aa19.44■□□□□ 0.7
COL5A3-201ENST00000264828 AATKQ6ZMQ8 1374 aa19.44■□□□□ 0.7
COL5A3-201ENST00000264828 LAD1O00515 517 aa19.44■□□□□ 0.7
COL5A3-201ENST00000264828 PPEF1O14829 653 aaPredicted RBP19.44■□□□□ 0.7
COL5A3-201ENST00000264828 ESRRGP62508 458 aa19.44■□□□□ 0.7
COL5A3-201ENST00000264828 RWDD2AQ9UIY3 292 aa19.44■□□□□ 0.7
COL5A3-201ENST00000264828 DBNLQ9UJU6 430 aaKnown RBP19.44■□□□□ 0.7
COL5A3-201ENST00000264828 A0A087WUV0 522 aaPredicted RBP19.44■□□□□ 0.7
COL5A3-201ENST00000264828 DR1Q01658 176 aa19.44■□□□□ 0.7
COL5A3-201ENST00000264828 KIF23Q02241 960 aaPredicted RBP19.44■□□□□ 0.7
COL5A3-201ENST00000264828 CYP27A1Q02318 531 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms