RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ABCD1P33897 745 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 POTEDQ86YR6 584 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 IPO4Q8TEX9 1081 aaKnown RBP18.25■□□□□ 0.51
PHRF1-201ENST00000264555 TMEM260Q9NX78 707 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 CYP27A1Q02318 531 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 CIAPIN1Q6FI81 312 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 FAM20AQ96MK3 541 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 RASSF4Q9H2L5 321 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 A0A0G2JLW4 131 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 USP17L15C9J2P7 530 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 USP17L13C9JLJ4 530 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 USP17L11C9JVI0 530 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 USP17L18D6R9N7 530 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 USP17L22D6RA61 530 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 USP17L17D6RBQ6 530 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 USP17L19D6RCP7 530 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 USP17L20D6RJB6 530 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 USP17L24Q0WX57 530 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 USP17L6PQ6QN14 398 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 TDRD3Q9H7E2 651 aaKnown RBP18.24■□□□□ 0.51
PHRF1-201ENST00000264555 RAB20Q9NX57 234 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 NSFP46459 744 aaKnown RBP18.24■□□□□ 0.51
PHRF1-201ENST00000264555 CTTNQ14247 550 aaKnown RBP18.24■□□□□ 0.51
PHRF1-201ENST00000264555 SUPT20HL1Q3ZLR7 823 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 ADGRF4Q8IZF3 695 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 SLC7A3Q8WY07 619 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 CRAMP1Q96RY5 1269 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 KRT12Q99456 494 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 PARD6BQ9BYG5 372 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 JCADQ9P266 1359 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 C21orf2O43822 256 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 SEC31AO94979 1220 aaKnown RBP18.24■□□□□ 0.51
PHRF1-201ENST00000264555 MOCS3O95396 460 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 CEP170P1Q96L14 293 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 FAM81BQ96LP2 452 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 MIS18BP1Q6P0N0 1132 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 HPS5Q9UPZ3 1129 aa18.24■□□□□ 0.51
PHRF1-201ENST00000264555 KDM6AO15550 1401 aaPredicted RBP18.24■□□□□ 0.51
PHRF1-201ENST00000264555 PPFIA4O75335 1185 aa18.23■□□□□ 0.51
PHRF1-201ENST00000264555 GBP1P32455 592 aa18.23■□□□□ 0.51
PHRF1-201ENST00000264555 ARHGAP27Q6ZUM4 889 aa18.23■□□□□ 0.51
PHRF1-201ENST00000264555 STK10O94804 968 aaKnown RBP18.23■□□□□ 0.51
PHRF1-201ENST00000264555 TBC1D16Q8TBP0 767 aa18.23■□□□□ 0.51
PHRF1-201ENST00000264555 CEP63Q96MT8 703 aa18.23■□□□□ 0.51
PHRF1-201ENST00000264555 MXD3Q9BW11 206 aa18.23■□□□□ 0.51
PHRF1-201ENST00000264555 DPH5Q9H2P9 285 aa18.23■□□□□ 0.51
PHRF1-201ENST00000264555 RGS16O15492 202 aaPredicted RBP18.23■□□□□ 0.51
PHRF1-201ENST00000264555 PIK3CAP42336 1068 aa18.23■□□□□ 0.51
PHRF1-201ENST00000264555 CCDC89Q8N998 374 aa18.23■□□□□ 0.51
PHRF1-201ENST00000264555 SMC6Q96SB8 1091 aa18.23■□□□□ 0.51
PHRF1-201ENST00000264555 ANKFY1Q9P2R3 1169 aa18.23■□□□□ 0.51
PHRF1-201ENST00000264555 PXDNQ92626 1479 aa18.23■□□□□ 0.51
PHRF1-201ENST00000264555 RIMS1Q86UR5 1692 aaKnown RBP18.23■□□□□ 0.51
PHRF1-201ENST00000264555 ARHGAP4P98171 946 aa18.23■□□□□ 0.51
PHRF1-201ENST00000264555 CCDC6Q16204 474 aa18.23■□□□□ 0.51
PHRF1-201ENST00000264555 INTS8Q75QN2 995 aaKnown RBP18.23■□□□□ 0.51
PHRF1-201ENST00000264555 PCIF1Q9H4Z3 704 aa18.23■□□□□ 0.51
PHRF1-201ENST00000264555 SPATA31A5Q5VU36 1347 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 SPATA31A7Q8IWB4 1347 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 TMEM191BP0C7N4 346 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 PP2D1A8MPX8 630 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 GFPT2O94808 682 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 INPP5BP32019 993 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 DPY19L2Q6NUT2 758 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.22■□□□□ 0.51
PHRF1-201ENST00000264555 TRIM7Q9C029 511 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 SLC5A4Q9NY91 659 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 ADD3Q9UEY8 706 aaKnown RBP18.22■□□□□ 0.51
PHRF1-201ENST00000264555 ANAPC4Q9UJX5 808 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 CNTNAP4Q9C0A0 1308 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 AKR1B1P15121 316 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 KCNB1Q14721 858 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 ZSCAN26Q16670 478 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 SMIM5Q71RC9 77 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 MRRFQ96E11 262 aaKnown RBP18.22■□□□□ 0.51
PHRF1-201ENST00000264555 CABS1Q96KC9 395 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 RUNDC3BQ96NL0 473 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 ZNF341Q9BYN7 854 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 RABEP2Q9H5N1 569 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 SENP2Q9HC62 589 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 TUBE1Q9UJT0 475 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 EPHB4P54760 987 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 QRICH1Q2TAL8 776 aa18.22■□□□□ 0.51
PHRF1-201ENST00000264555 MAP3K9P80192 1104 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 HADHQ16836 314 aaKnown RBP18.21■□□□□ 0.51
PHRF1-201ENST00000264555 PRR5LQ6MZQ0 368 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 PBKQ96KB5 322 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 F5H6K3 240 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 DAPK3O43293 454 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 POLR2BP30876 1174 aaKnown RBP18.21■□□□□ 0.51
PHRF1-201ENST00000264555 ARHGAP25P42331 645 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 CLCN6P51797 869 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 KLRC3Q07444 240 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 DALRD3Q5D0E6 543 aaKnown RBP18.21■□□□□ 0.51
PHRF1-201ENST00000264555 FAM83BQ5T0W9 1011 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 ADAT2Q7Z6V5 191 aaKnown RBP18.21■□□□□ 0.51
PHRF1-201ENST00000264555 TRIM11Q96F44 468 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 FAM196BA6NMK8 535 aa18.21■□□□□ 0.51
PHRF1-201ENST00000264555 PGRMC1O00264 195 aaKnown RBP18.21■□□□□ 0.51
PHRF1-201ENST00000264555 ADCY8P40145 1251 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms