RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 CALM2P0DP24 149 aa14.31□□□□□ -0.12
SNX1-201ENST00000261889 CALM3P0DP25 149 aa14.31□□□□□ -0.12
SNX1-201ENST00000261889 GRB10Q13322 594 aa14.31□□□□□ -0.12
SNX1-201ENST00000261889 DCAF17Q5H9S7 520 aaPredicted RBP14.31□□□□□ -0.12
SNX1-201ENST00000261889 GOPCQ9HD26 462 aa14.31□□□□□ -0.12
SNX1-201ENST00000261889 BLOC1S4Q9NUP1 217 aa14.31□□□□□ -0.12
SNX1-201ENST00000261889 ANKIB1Q9P2G1 1089 aa14.31□□□□□ -0.12
SNX1-201ENST00000261889 AMACRQ9UHK6 382 aa14.31□□□□□ -0.12
SNX1-201ENST00000261889 SPEF2Q9C093 1822 aa14.31□□□□□ -0.12
SNX1-201ENST00000261889 ERVV-1B6SEH8 477 aa14.31□□□□□ -0.12
SNX1-201ENST00000261889 BUB1BO60566 1050 aaPredicted RBP14.31□□□□□ -0.12
SNX1-201ENST00000261889 EPHB4P54760 987 aa14.31□□□□□ -0.12
SNX1-201ENST00000261889 PIK3R5Q8WYR1 880 aa14.31□□□□□ -0.12
SNX1-201ENST00000261889 ELMO3Q96BJ8 720 aa14.31□□□□□ -0.12
SNX1-201ENST00000261889 NOX5Q96PH1 765 aa14.31□□□□□ -0.12
SNX1-201ENST00000261889 KIF13BQ9NQT8 1826 aa14.31□□□□□ -0.12
SNX1-201ENST00000261889 TARSL2A2RTX5 802 aaKnown RBP14.31□□□□□ -0.12
SNX1-201ENST00000261889 SFI1A8K8P3 1242 aa14.31□□□□□ -0.12
SNX1-201ENST00000261889 RPSAP08865 295 aaKnown RBP14.31□□□□□ -0.12
SNX1-201ENST00000261889 CALML3P27482 149 aa14.31□□□□□ -0.12
SNX1-201ENST00000261889 HIBADHP31937 336 aaKnown RBP14.31□□□□□ -0.12
SNX1-201ENST00000261889 FAM196BA6NMK8 535 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 SLC9A1P19634 815 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 ABCB4P21439 1286 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 ERVK-9P63128 1117 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 ADCY1Q08828 1119 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 SHROOM1Q2M3G4 852 aaPredicted RBP14.3□□□□□ -0.12
SNX1-201ENST00000261889 MCTP2Q6DN12 878 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 SV2BQ7L1I2 683 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 AMOTL1Q8IY63 956 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 ZNF473Q8WTR7 871 aaKnown RBP14.3□□□□□ -0.12
SNX1-201ENST00000261889 BAP1Q92560 729 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 TBC1D31Q96DN5 1066 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 CCT8L2Q96SF2 557 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 SEPT11Q9NVA2 429 aaKnown RBP14.3□□□□□ -0.12
SNX1-201ENST00000261889 NR2E1Q9Y466 385 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 FAM83BQ5T0W9 1011 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 AADACL2Q6P093 401 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 PNMA5Q96PV4 448 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 TRIM51Q9BSJ1 452 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 MLXIPLQ9NP71 852 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 ANAPC4Q9UJX5 808 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 DAPK3O43293 454 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 SHOX2O60902 331 aaPredicted RBP14.3□□□□□ -0.12
SNX1-201ENST00000261889 SLCO1A2P46721 670 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 ZNF211Q13398 564 aaPredicted RBP14.3□□□□□ -0.12
SNX1-201ENST00000261889 NONOQ15233 471 aaKnown RBP eCLIP14.3□□□□□ -0.12
SNX1-201ENST00000261889 TTBK2Q6IQ55 1244 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 CCDC170Q8IYT3 715 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 CALML4Q96GE6 196 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 DHTKD1Q96HY7 919 aaPredicted RBP14.3□□□□□ -0.12
SNX1-201ENST00000261889 PURBQ96QR8 312 aaKnown RBP14.3□□□□□ -0.12
SNX1-201ENST00000261889 BRIP1Q9BX63 1249 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 CCDC113Q9H0I3 377 aa14.3□□□□□ -0.12
SNX1-201ENST00000261889 OPA1O60313 960 aa14.29□□□□□ -0.12
SNX1-201ENST00000261889 RPS6KA4O75676 772 aa14.29□□□□□ -0.12
SNX1-201ENST00000261889 MCM3P25205 808 aa14.29□□□□□ -0.12
SNX1-201ENST00000261889 EPS15P42566 896 aa14.29□□□□□ -0.12
SNX1-201ENST00000261889 CALCRLQ16602 461 aa14.29□□□□□ -0.12
SNX1-201ENST00000261889 CFAP221Q4G0U5 840 aa14.29□□□□□ -0.12
SNX1-201ENST00000261889 SOGA3Q5TF21 947 aa14.29□□□□□ -0.12
SNX1-201ENST00000261889 ARL6IP4Q66PJ3 421 aaKnown RBP14.29□□□□□ -0.12
SNX1-201ENST00000261889 CCDC47Q96A33 483 aaKnown RBP14.29□□□□□ -0.12
SNX1-201ENST00000261889 SH3GL2Q99962 352 aa14.29□□□□□ -0.12
SNX1-201ENST00000261889 HAUS2Q9NVX0 235 aa14.29□□□□□ -0.12
SNX1-201ENST00000261889 CCNL1Q9UK58 526 aaPredicted RBP14.29□□□□□ -0.12
SNX1-201ENST00000261889 NOVA2Q9UNW9 492 aaKnown RBP14.29□□□□□ -0.12
SNX1-201ENST00000261889 KLHL30Q0D2K2 578 aa14.29□□□□□ -0.12
SNX1-201ENST00000261889 NFIXQ14938 502 aa14.29□□□□□ -0.12
SNX1-201ENST00000261889 TBC1D9BQ66K14 1250 aa14.29□□□□□ -0.12
SNX1-201ENST00000261889 HGSNATQ68CP4 663 aa14.29□□□□□ -0.12
SNX1-201ENST00000261889 IQCEQ6IPM2 695 aa14.29□□□□□ -0.12
SNX1-201ENST00000261889 MMGT1Q8N4V1 131 aa14.29□□□□□ -0.12
SNX1-201ENST00000261889 LARP4BQ92615 738 aaKnown RBP14.29□□□□□ -0.12
SNX1-201ENST00000261889 CNOT8Q9UFF9 292 aaKnown RBP14.29□□□□□ -0.12
SNX1-201ENST00000261889 BICDL2A1A5D9 508 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 CASP5P51878 434 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 NEK8Q86SG6 692 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 TICAM2Q86XR7 235 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 CEP95Q96GE4 821 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 BARHL2Q9NY43 387 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 ANO9A1A5B4 782 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 CLIC2O15247 247 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 SKAP2O75563 359 aaPredicted RBP14.28□□□□□ -0.12
SNX1-201ENST00000261889 CTNNA1P35221 906 aaKnown RBP14.28□□□□□ -0.12
SNX1-201ENST00000261889 IFNAR2P48551 515 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 CYP4A11Q02928 519 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 PDXDC1Q6P996 788 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 NLRP14Q86W24 1093 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 CCDC125Q86Z20 511 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 TNRC6CQ9HCJ0 1690 aaKnown RBP14.28□□□□□ -0.12
SNX1-201ENST00000261889 KIAA1551Q9HCM1 1747 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 POTEB3A0JP26 581 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 POTECB2RU33 542 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 GOLGA8KD6RF30 607 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 NOL4O94818 638 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 KRT18P05783 430 aaKnown RBP14.28□□□□□ -0.12
SNX1-201ENST00000261889 TRAPPC10P48553 1259 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 KCNA1Q09470 495 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 CCDC38Q502W7 563 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms