RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.22□□□□□ -0.295e-7■■■□□ 18.9
SPG11-201ENST00000261866 GCNT4Q9P109 453 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 TTC37Q6PGP7 1564 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 RGS16O15492 202 aaPredicted RBP13.22□□□□□ -0.29
SPG11-201ENST00000261866 ANXA13P27216 316 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 CALN1Q9BXU9 219 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 PCDHA5Q9Y5H7 936 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 MAPK4P31152 587 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 ATP11AP98196 1134 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 SPP2Q13103 211 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 NACC1Q96RE7 527 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 TSR3Q9UJK0 312 aaKnown RBP13.22□□□□□ -0.29
SPG11-201ENST00000261866 SAMD9LQ8IVG5 1584 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 AFPP02771 609 aaKnown RBP13.22□□□□□ -0.29
SPG11-201ENST00000261866 ELF1P32519 619 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 HP1BP3Q5SSJ5 553 aaPredicted RBP13.22□□□□□ -0.29
SPG11-201ENST00000261866 CATSPER4Q7RTX7 472 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 FBXO18Q8NFZ0 1043 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 NPC1L1Q9UHC9 1359 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 ERVK-7P63135 1459 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 MMP1P03956 469 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 ATP2A3Q93084 1043 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 TACO1Q9BSH4 297 aaKnown RBP13.22□□□□□ -0.29
SPG11-201ENST00000261866 SPATA31A3Q5VYP0 1347 aa13.22□□□□□ -0.29
SPG11-201ENST00000261866 PASD1Q8IV76 773 aa13.21□□□□□ -0.29
SPG11-201ENST00000261866 MARCH10Q8NA82 808 aaPredicted RBP13.21□□□□□ -0.29
SPG11-201ENST00000261866 RPF1Q9H9Y2 349 aaKnown RBP13.21□□□□□ -0.29
SPG11-201ENST00000261866 SYNDIG1LA6NDD5 238 aa13.21□□□□□ -0.29
SPG11-201ENST00000261866 PRPSAP1Q14558 356 aa13.21□□□□□ -0.29
SPG11-201ENST00000261866 ATP7BP35670 1465 aa13.21□□□□□ -0.29
SPG11-201ENST00000261866 KCTD6Q8NC69 237 aa13.21□□□□□ -0.29
SPG11-201ENST00000261866 MTRQ99707 1265 aa13.21□□□□□ -0.29
SPG11-201ENST00000261866 RAB17Q9H0T7 212 aa13.21□□□□□ -0.29
SPG11-201ENST00000261866 LRRC4Q9HBW1 653 aa13.21□□□□□ -0.29
SPG11-201ENST00000261866 KRT1P04264 644 aa13.21□□□□□ -0.29
SPG11-201ENST00000261866 MCTP2Q6DN12 878 aa13.21□□□□□ -0.29
SPG11-201ENST00000261866 SIX6OS1Q8N1H7 587 aa13.21□□□□□ -0.29
SPG11-201ENST00000261866 CFAP36Q96G28 342 aa13.21□□□□□ -0.29
SPG11-201ENST00000261866 PNMA6FA0A0J9YX94 578 aa13.21□□□□□ -0.3
SPG11-201ENST00000261866 RMDN3Q96TC7 470 aa13.21□□□□□ -0.3
SPG11-201ENST00000261866 ANKARQ7Z5J8 1434 aa13.21□□□□□ -0.3
SPG11-201ENST00000261866 DENND3A2RUS2 1198 aa13.21□□□□□ -0.3
SPG11-201ENST00000261866 ARHGAP42A6NI28 874 aa13.21□□□□□ -0.3
SPG11-201ENST00000261866 POLR2BP30876 1174 aaKnown RBP13.21□□□□□ -0.3
SPG11-201ENST00000261866 MTMR1Q13613 665 aa13.21□□□□□ -0.3
SPG11-201ENST00000261866 TXNRD1Q16881 649 aa13.21□□□□□ -0.3
SPG11-201ENST00000261866 DPCR1Q3MIW9 517 aa13.21□□□□□ -0.3
SPG11-201ENST00000261866 SPATA1Q5VX52 437 aa13.21□□□□□ -0.3
SPG11-201ENST00000261866 PNMA8AQ86V59 439 aaPredicted RBP13.21□□□□□ -0.3
SPG11-201ENST00000261866 PCDHA6Q9UN73 950 aa13.21□□□□□ -0.3
SPG11-201ENST00000261866 PCDHA8Q9Y5H6 950 aa13.21□□□□□ -0.3
SPG11-201ENST00000261866 POTEMA6NI47 508 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 KIF3CO14782 793 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 FTCDO95954 541 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 C11orf57Q6ZUT1 292 aaPredicted RBP13.2□□□□□ -0.3
SPG11-201ENST00000261866 PDZD4Q76G19 769 aaPredicted RBP13.2□□□□□ -0.3
SPG11-201ENST00000261866 TMC4Q7Z404 712 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 ACRBPQ8NEB7 543 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 CDC26Q8NHZ8 85 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 MRPL46Q9H2W6 279 aaKnown RBP13.2□□□□□ -0.3
SPG11-201ENST00000261866 CPSF3Q9UKF6 684 aaKnown RBP13.2□□□□□ -0.3
SPG11-201ENST00000261866 MAN1B1Q9UKM7 699 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 KIF24Q5T7B8 1368 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 XPOTO43592 962 aaKnown RBP13.2□□□□□ -0.3
SPG11-201ENST00000261866 STAT3P40763 770 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 RBBP5Q15291 538 aaKnown RBP13.2□□□□□ -0.3
SPG11-201ENST00000261866 TTC31Q49AM3 519 aaPredicted RBP13.2□□□□□ -0.3
SPG11-201ENST00000261866 TEX2Q8IWB9 1127 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 RNF26Q9BY78 433 aaPredicted RBP13.2□□□□□ -0.3
SPG11-201ENST00000261866 BHMT2Q9H2M3 363 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 DNAJC17Q9NVM6 304 aaKnown RBP13.2□□□□□ -0.3
SPG11-201ENST00000261866 MOCS3O95396 460 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 KIF11P52732 1056 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 RHPN2Q8IUC4 686 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 TBC1D10CQ8IV04 446 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 SCN4BQ8IWT1 228 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 DNAAF3Q8N9W5 541 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.2□□□□□ -0.3
SPG11-201ENST00000261866 GJD4Q96KN9 370 aaPredicted RBP13.2□□□□□ -0.3
SPG11-201ENST00000261866 CD209Q9NNX6 404 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 CYP2E1P05181 493 aaPredicted RBP13.2□□□□□ -0.3
SPG11-201ENST00000261866 OAS2P29728 719 aaKnown RBP13.2□□□□□ -0.3
SPG11-201ENST00000261866 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.2□□□□□ -0.3
SPG11-201ENST00000261866 H2AFZP0C0S5 128 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 H2AFVQ71UI9 128 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 LCA5Q86VQ0 697 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 CACTINQ8WUQ7 758 aaKnown RBP13.2□□□□□ -0.3
SPG11-201ENST00000261866 MAIP1Q8WWC4 291 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 FOXP1Q9H334 677 aaPredicted RBP13.2□□□□□ -0.3
SPG11-201ENST00000261866 MRPS25P82663 173 aaKnown RBP13.2□□□□□ -0.3
SPG11-201ENST00000261866 TRIM58Q8NG06 486 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 EXT2Q93063 718 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 WDR11Q9BZH6 1224 aa13.2□□□□□ -0.3
SPG11-201ENST00000261866 MYO1FO00160 1098 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 BRD3Q15059 726 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 CYB5R4Q7L1T6 521 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 P2RX5Q93086 422 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 MMP19Q99542 508 aa13.19□□□□□ -0.3
SPG11-201ENST00000261866 SAMSN1Q9NSI8 373 aaKnown RBP13.19□□□□□ -0.3
SPG11-201ENST00000261866 HYOU1Q9Y4L1 999 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms