RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 SAMD7Q7Z3H4 446 aa15.23■□□□□ 0.03
CDH1-201ENST00000261769 SGMS1Q86VZ5 419 aa15.23■□□□□ 0.03
CDH1-201ENST00000261769 TRIM50Q86XT4 487 aa15.23■□□□□ 0.03
CDH1-201ENST00000261769 IFIH1Q9BYX4 1025 aaKnown RBP15.23■□□□□ 0.03
CDH1-201ENST00000261769 DEPDC5O75140 1603 aa15.23■□□□□ 0.03
CDH1-201ENST00000261769 CCL15-CCL14A0A0B4J2E2 113 aa15.23■□□□□ 0.03
CDH1-201ENST00000261769 SLC25A27O95847 323 aa15.23■□□□□ 0.03
CDH1-201ENST00000261769 CTTNQ14247 550 aaKnown RBP15.23■□□□□ 0.03
CDH1-201ENST00000261769 CCL15Q16663 113 aa15.23■□□□□ 0.03
CDH1-201ENST00000261769 PSPC1Q8WXF1 523 aaKnown RBP15.23■□□□□ 0.03
CDH1-201ENST00000261769 P2RX5Q93086 422 aa15.23■□□□□ 0.03
CDH1-201ENST00000261769 GPR75-ASB3A0A0A6YYF3 556 aa15.22■□□□□ 0.03
CDH1-201ENST00000261769 NSFP46459 744 aaKnown RBP15.22■□□□□ 0.03
CDH1-201ENST00000261769 IFRD2Q12894 506 aaPredicted RBP15.22■□□□□ 0.03
CDH1-201ENST00000261769 MCM6Q14566 821 aa15.22■□□□□ 0.03
CDH1-201ENST00000261769 SYT10Q6XYQ8 523 aa15.22■□□□□ 0.03
CDH1-201ENST00000261769 MICALCLQ6ZW33 695 aa15.22■□□□□ 0.03
CDH1-201ENST00000261769 VCPKMTQ9H867 229 aa15.22■□□□□ 0.03
CDH1-201ENST00000261769 IFT122Q9HBG6 1241 aa15.22■□□□□ 0.03
CDH1-201ENST00000261769 EMILIN3Q9NT22 766 aa15.22■□□□□ 0.03
CDH1-201ENST00000261769 MAPK6Q16659 721 aa15.22■□□□□ 0.03
CDH1-201ENST00000261769 BARHL2Q9NY43 387 aa15.22■□□□□ 0.03
CDH1-201ENST00000261769 PLCG1P19174 1290 aa15.22■□□□□ 0.03
CDH1-201ENST00000261769 EEF1GP26641 437 aaKnown RBP15.22■□□□□ 0.03
CDH1-201ENST00000261769 MTIF3Q9H2K0 278 aaKnown RBP15.22■□□□□ 0.03
CDH1-201ENST00000261769 COL5A2P05997 1499 aaPredicted RBP15.22■□□□□ 0.03
CDH1-201ENST00000261769 OATP04181 439 aa15.22■□□□□ 0.03
CDH1-201ENST00000261769 IFT81Q8WYA0 676 aa15.22■□□□□ 0.03
CDH1-201ENST00000261769 CPVLQ9H3G5 476 aa15.22■□□□□ 0.03
CDH1-201ENST00000261769 ZNF302Q9NR11 478 aa15.22■□□□□ 0.03
CDH1-201ENST00000261769 PCDHB6Q9Y5E3 794 aa15.22■□□□□ 0.03
CDH1-201ENST00000261769 BZW2Q9Y6E2 419 aaKnown RBP15.22■□□□□ 0.03
CDH1-201ENST00000261769 VWDEQ8N2E2 1590 aa15.21■□□□□ 0.03
CDH1-201ENST00000261769 TNFAIP2Q03169 654 aa15.21■□□□□ 0.03
CDH1-201ENST00000261769 GABPAQ06546 454 aa15.21■□□□□ 0.03
CDH1-201ENST00000261769 AIFM3Q96NN9 605 aa15.21■□□□□ 0.03
CDH1-201ENST00000261769 WDR70Q9NW82 654 aa15.21■□□□□ 0.03
CDH1-201ENST00000261769 REREQ9P2R6 1566 aa15.21■□□□□ 0.03
CDH1-201ENST00000261769 ZNF233A6NK53 670 aa15.21■□□□□ 0.03
CDH1-201ENST00000261769 POLR2FP61218 127 aaKnown RBP15.21■□□□□ 0.03
CDH1-201ENST00000261769 SCYL2Q6P3W7 929 aa15.21■□□□□ 0.03
CDH1-201ENST00000261769 RBSNQ9H1K0 784 aa15.21■□□□□ 0.03
CDH1-201ENST00000261769 NEURL4Q96JN8 1562 aa15.21■□□□□ 0.03
CDH1-201ENST00000261769 ITSN1Q15811 1721 aa15.21■□□□□ 0.03
CDH1-201ENST00000261769 NDUFB10O96000 172 aa15.21■□□□□ 0.03
CDH1-201ENST00000261769 P4HBP07237 508 aaKnown RBP15.21■□□□□ 0.03
CDH1-201ENST00000261769 USP11P51784 963 aa15.21■□□□□ 0.03
CDH1-201ENST00000261769 KRT81Q14533 505 aa15.21■□□□□ 0.03
CDH1-201ENST00000261769 CNOT6LQ96LI5 555 aaKnown RBP15.21■□□□□ 0.03
CDH1-201ENST00000261769 SPZ1Q9BXG8 430 aa15.21■□□□□ 0.03
CDH1-201ENST00000261769 AMFRQ9UKV5 643 aa15.21■□□□□ 0.03
CDH1-201ENST00000261769 PCDHB4Q9Y5E5 795 aa15.21■□□□□ 0.03
CDH1-201ENST00000261769 CEP104O60308 925 aa15.21■□□□□ 0.02
CDH1-201ENST00000261769 QARSP47897 775 aaKnown RBP15.21■□□□□ 0.02
CDH1-201ENST00000261769 ZNF658Q5TYW1 1059 aaPredicted RBP15.21■□□□□ 0.02
CDH1-201ENST00000261769 SPATA33Q96N06 139 aa15.21■□□□□ 0.02
CDH1-201ENST00000261769 XPO4Q9C0E2 1151 aaKnown RBP15.21■□□□□ 0.02
CDH1-201ENST00000261769 C2orf40Q9H1Z8 148 aa15.21■□□□□ 0.02
CDH1-201ENST00000261769 GOLGA6CA6NDK9 693 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 GOLGA6BA6NDN3 693 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 AFPP02771 609 aaKnown RBP15.2■□□□□ 0.02
CDH1-201ENST00000261769 H2AFZP0C0S5 128 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 GOLGA6DP0CG33 693 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 H2AFVQ71UI9 128 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 MICAL1Q8TDZ2 1067 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 HAUS1Q96CS2 278 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 GOLGA6AQ9NYA3 693 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 PPP4R3CPQ6ZMV5 832 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 ARMCX2Q7L311 632 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 TUBGCP2Q9BSJ2 902 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 MSTO1Q9BUK6 570 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 EPHX2P34913 555 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 PPP4CP60510 307 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
CDH1-201ENST00000261769 ZNF543Q08ER8 600 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 ZBTB33Q86T24 672 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 VPS33BQ9H267 617 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 KIAA1586Q9HCI6 787 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 IPO5O00410 1097 aaKnown RBP15.2■□□□□ 0.02
CDH1-201ENST00000261769 PPP1R21Q6ZMI0 780 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 C16orf86Q6ZW13 317 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 RAB20Q9NX57 234 aa15.2■□□□□ 0.02
CDH1-201ENST00000261769 TERF1P54274 439 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 PEX3P56589 373 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 DSTYKQ6XUX3 929 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 GSDMBQ8TAX9 411 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 TRIM11Q96F44 468 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 ASIC3Q9UHC3 531 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 TTLL3Q9Y4R7 772 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 ABCB4P21439 1286 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 CDC25AP30304 524 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 MXI1P50539 228 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 TWF2Q6IBS0 349 aaKnown RBP15.19■□□□□ 0.02
CDH1-201ENST00000261769 GPRC5AQ8NFJ5 357 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 PAIP2Q9BPZ3 127 aaKnown RBP15.19■□□□□ 0.02
CDH1-201ENST00000261769 MXD3Q9BW11 206 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 NSRP1Q9H0G5 558 aaKnown RBP15.19■□□□□ 0.02
CDH1-201ENST00000261769 DENND3A2RUS2 1198 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 GTF2A2P52657 109 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 PSMC5P62195 406 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms