RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 PDIA5Q14554 519 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 TMEM119Q4V9L6 283 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 ZCWPW2Q504Y3 356 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 SH2D3CQ8N5H7 860 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 NEDD1Q8NHV4 660 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 SNX29Q8TEQ0 813 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 CCDC43Q96MW1 224 aaKnown RBP18.7■□□□□ 0.58
CDK4-201ENST00000257904 EPB41L5Q9HCM4 733 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 LUC7LQ9NQ29 371 aaKnown RBP18.7■□□□□ 0.58
CDK4-201ENST00000257904 COL4A3BPQ9Y5P4 624 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 GRID2IPA4D2P6 1211 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 TDP2O95551 362 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 FAM153BP0C7A2 387 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 CDK8P49336 464 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 LIG3P49916 1009 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 GUCY2DQ02846 1103 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 PDCLQ13371 301 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 NAB2Q15742 525 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 GRIK5Q16478 980 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 FAM153CQ494X1 144 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 FAM83BQ5T0W9 1011 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 CFAP58Q5T655 872 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 C16orf86Q6ZW13 317 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 KCNK18Q7Z418 384 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 MYOCDQ8IZQ8 938 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 MREGQ8N565 214 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 NUDT12Q9BQG2 462 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 FAM153AQ9UHL3 310 aa18.7■□□□□ 0.58
CDK4-201ENST00000257904 ESYT3A0FGR9 886 aa18.69■□□□□ 0.58
CDK4-201ENST00000257904 ZSCAN5CA6NGD5 496 aaPredicted RBP18.69■□□□□ 0.58
CDK4-201ENST00000257904 ZNF233A6NK53 670 aa18.69■□□□□ 0.58
CDK4-201ENST00000257904 GYS1P13807 737 aa18.69■□□□□ 0.58
CDK4-201ENST00000257904 FKBP3Q00688 224 aaKnown RBP18.69■□□□□ 0.58
CDK4-201ENST00000257904 KRT79Q5XKE5 535 aa18.69■□□□□ 0.58
CDK4-201ENST00000257904 KCTD16Q68DU8 428 aa18.69■□□□□ 0.58
CDK4-201ENST00000257904 hCG_1984214I3L0E3 225 aa18.69■□□□□ 0.58
CDK4-201ENST00000257904 EDIL3O43854 480 aa18.69■□□□□ 0.58
CDK4-201ENST00000257904 HMGB2P26583 209 aaKnown RBP18.69■□□□□ 0.58
CDK4-201ENST00000257904 GTF2A1P52655 376 aaPredicted RBP18.69■□□□□ 0.58
CDK4-201ENST00000257904 CCDC40Q4G0X9 1142 aa18.69■□□□□ 0.58
CDK4-201ENST00000257904 KDM7AQ6ZMT4 941 aa18.69■□□□□ 0.58
CDK4-201ENST00000257904 SUGP1Q8IWZ8 645 aaKnown RBP18.69■□□□□ 0.58
CDK4-201ENST00000257904 ZNF713Q8N859 430 aaPredicted RBP18.69■□□□□ 0.58
CDK4-201ENST00000257904 IFT81Q8WYA0 676 aa18.69■□□□□ 0.58
CDK4-201ENST00000257904 ATP6V0A2Q9Y487 856 aa18.69■□□□□ 0.58
CDK4-201ENST00000257904 SAMM50Q9Y512 469 aa18.69■□□□□ 0.58
CDK4-201ENST00000257904 PCDHGC5Q9Y5F6 944 aa18.69■□□□□ 0.58
CDK4-201ENST00000257904 DDX60LQ5H9U9 1706 aaKnown RBP18.68■□□□□ 0.58
CDK4-201ENST00000257904 NDUFAB1O14561 156 aa18.68■□□□□ 0.58
CDK4-201ENST00000257904 PLSCR1O15162 318 aa18.68■□□□□ 0.58
CDK4-201ENST00000257904 FTCDO95954 541 aa18.68■□□□□ 0.58
CDK4-201ENST00000257904 KLRC1P26715 233 aa18.68■□□□□ 0.58
CDK4-201ENST00000257904 MEI1Q5TIA1 1274 aa18.68■□□□□ 0.58
CDK4-201ENST00000257904 MMS22LQ6ZRQ5 1243 aa18.68■□□□□ 0.58
CDK4-201ENST00000257904 CD302Q8IX05 232 aa18.68■□□□□ 0.58
CDK4-201ENST00000257904 CEP95Q96GE4 821 aa18.68■□□□□ 0.58
CDK4-201ENST00000257904 INPP4AQ96PE3 977 aaPredicted RBP18.68■□□□□ 0.58
CDK4-201ENST00000257904 LSM14BQ9BX40 385 aaKnown RBP18.68■□□□□ 0.58
CDK4-201ENST00000257904 UBA5Q9GZZ9 404 aa18.68■□□□□ 0.58
CDK4-201ENST00000257904 RIOX1Q9H6W3 641 aa18.68■□□□□ 0.58
CDK4-201ENST00000257904 ANKIB1Q9P2G1 1089 aa18.68■□□□□ 0.58
CDK4-201ENST00000257904 ATXN2Q99700 1313 aaKnown RBP18.68■□□□□ 0.58
CDK4-201ENST00000257904 TRAF5O00463 557 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 ATP1A2P50993 1020 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 DNA2P51530 1060 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 POLR2FP61218 127 aaKnown RBP18.67■□□□□ 0.58
CDK4-201ENST00000257904 COASYQ13057 564 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 GRAPQ13588 217 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 SLC18A3Q16572 532 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 EMC10Q5UCC4 262 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 PRR5LQ6MZQ0 368 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 SLC51AQ86UW1 340 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 GRAPLQ8TC17 118 aaPredicted RBP18.67■□□□□ 0.58
CDK4-201ENST00000257904 PIK3R5Q8WYR1 880 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 KAT2BQ92831 832 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 DNAJC19Q96DA6 116 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 KRT12Q99456 494 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 RTFDC1Q9BY42 306 aaPredicted RBP18.67■□□□□ 0.58
CDK4-201ENST00000257904 USP17L5A8MUK1 530 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 ZEB2O60315 1214 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 LDHCP07864 332 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 ADCY7P51828 1080 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 B4GALNT4Q76KP1 1039 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 CASKIN2Q8WXE0 1202 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 TBC1D5Q92609 795 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 CEP63Q96MT8 703 aa18.67■□□□□ 0.58
CDK4-201ENST00000257904 APBA3O96018 575 aa18.66■□□□□ 0.58
CDK4-201ENST00000257904 INPP5BP32019 993 aa18.66■□□□□ 0.58
CDK4-201ENST00000257904 SEPT2Q15019 361 aa18.66■□□□□ 0.58
CDK4-201ENST00000257904 ECM1Q16610 540 aa18.66■□□□□ 0.58
CDK4-201ENST00000257904 WHAMMQ8TF30 809 aa18.66■□□□□ 0.58
CDK4-201ENST00000257904 RNPC3Q96LT9 517 aaKnown RBP18.66■□□□□ 0.58
CDK4-201ENST00000257904 A0A087X0T9 212 aa18.65■□□□□ 0.58
CDK4-201ENST00000257904 FAM228BP0C875 321 aa18.65■□□□□ 0.58
CDK4-201ENST00000257904 NOVP48745 357 aa18.65■□□□□ 0.58
CDK4-201ENST00000257904 GUCY2FP51841 1108 aa18.65■□□□□ 0.58
CDK4-201ENST00000257904 CDC37Q16543 378 aaPredicted RBP18.65■□□□□ 0.58
CDK4-201ENST00000257904 FAM26FQ5R3K3 315 aa18.65■□□□□ 0.58
CDK4-201ENST00000257904 PLCD3Q8N3E9 789 aa18.65■□□□□ 0.58
CDK4-201ENST00000257904 C1orf131Q8NDD1 294 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms