RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 PSEN2P49810 448 aa20.49■□□□□ 0.87
SNRPA1-201ENST00000254193 MCTP2Q6DN12 878 aa20.49■□□□□ 0.87
SNRPA1-201ENST00000254193 GIMAP8Q8ND71 665 aaPredicted RBP20.49■□□□□ 0.87
SNRPA1-201ENST00000254193 CRYGNQ8WXF5 182 aa20.49■□□□□ 0.87
SNRPA1-201ENST00000254193 GPR20Q99678 358 aa20.49■□□□□ 0.87
SNRPA1-201ENST00000254193 ALG1Q9BT22 464 aa20.49■□□□□ 0.87
SNRPA1-201ENST00000254193 PPP1R12CQ9BZL4 782 aa20.49■□□□□ 0.87
SNRPA1-201ENST00000254193 UPF2Q9HAU5 1272 aaKnown RBP20.49■□□□□ 0.87
SNRPA1-201ENST00000254193 ORC3Q9UBD5 711 aaPredicted RBP20.49■□□□□ 0.87
SNRPA1-201ENST00000254193 PCDHA4Q9UN74 947 aa20.49■□□□□ 0.87
SNRPA1-201ENST00000254193 KCNJ14Q9UNX9 436 aa20.49■□□□□ 0.87
SNRPA1-201ENST00000254193 LIMCH1Q9UPQ0 1083 aa20.49■□□□□ 0.87
SNRPA1-201ENST00000254193 STK36Q9NRP7 1315 aa20.49■□□□□ 0.87
SNRPA1-201ENST00000254193 FAM86B1E9PN63 330 aa20.48■□□□□ 0.87
SNRPA1-201ENST00000254193 MEIS1O00470 390 aa20.48■□□□□ 0.87
SNRPA1-201ENST00000254193 MAFGO15525 162 aa20.48■□□□□ 0.87
SNRPA1-201ENST00000254193 TIMP1P01033 207 aa20.48■□□□□ 0.87
SNRPA1-201ENST00000254193 FAM86B2P0C5J1 330 aa20.48■□□□□ 0.87
SNRPA1-201ENST00000254193 FDPSP14324 419 aaKnown RBP20.48■□□□□ 0.87
SNRPA1-201ENST00000254193 ST3GAL1Q11201 340 aa20.48■□□□□ 0.87
SNRPA1-201ENST00000254193 MFSD10Q14728 455 aa20.48■□□□□ 0.87
SNRPA1-201ENST00000254193 C16orf70Q9BSU1 422 aa20.48■□□□□ 0.87
SNRPA1-201ENST00000254193 GJB4Q9NTQ9 266 aa20.48■□□□□ 0.87
SNRPA1-201ENST00000254193 HAS3O00219 553 aa20.47■□□□□ 0.87
SNRPA1-201ENST00000254193 LGALS2P05162 132 aa20.47■□□□□ 0.87
SNRPA1-201ENST00000254193 CYP3A4P08684 503 aa20.47■□□□□ 0.87
SNRPA1-201ENST00000254193 CYP2C9P11712 490 aa20.47■□□□□ 0.87
SNRPA1-201ENST00000254193 CYP2C18P33260 490 aa20.47■□□□□ 0.87
SNRPA1-201ENST00000254193 PTPN11Q06124 597 aaPredicted RBP20.47■□□□□ 0.87
SNRPA1-201ENST00000254193 NPY5RQ15761 445 aa20.47■□□□□ 0.87
SNRPA1-201ENST00000254193 KIAA0753Q2KHM9 967 aa20.47■□□□□ 0.87
SNRPA1-201ENST00000254193 BLIDQ8IZY5 108 aa20.47■□□□□ 0.87
SNRPA1-201ENST00000254193 NSUN7Q8NE18 718 aaKnown RBP20.47■□□□□ 0.87
SNRPA1-201ENST00000254193 KATNAL1Q9BW62 490 aa20.47■□□□□ 0.87
SNRPA1-201ENST00000254193 HIPK3Q9H422 1215 aa20.47■□□□□ 0.87
SNRPA1-201ENST00000254193 AGO4Q9HCK5 861 aaKnown RBP20.47■□□□□ 0.87
SNRPA1-201ENST00000254193 JAK2O60674 1132 aa20.46■□□□□ 0.87
SNRPA1-201ENST00000254193 SUPT20HL2P0C7V6 817 aa20.46■□□□□ 0.87
SNRPA1-201ENST00000254193 EPHB4P54760 987 aa20.46■□□□□ 0.87
SNRPA1-201ENST00000254193 UTP14CQ5TAP6 766 aaKnown RBP20.46■□□□□ 0.87
SNRPA1-201ENST00000254193 PLA2G4DQ86XP0 818 aa20.46■□□□□ 0.87
SNRPA1-201ENST00000254193 TRIM50Q86XT4 487 aa20.46■□□□□ 0.87
SNRPA1-201ENST00000254193 C7orf31Q8N865 590 aa20.46■□□□□ 0.87
SNRPA1-201ENST00000254193 DAGLBQ8NCG7 672 aa20.46■□□□□ 0.87
SNRPA1-201ENST00000254193 UIMC1Q96RL1 719 aa20.46■□□□□ 0.87
SNRPA1-201ENST00000254193 NOC4LQ9BVI4 516 aaKnown RBP20.46■□□□□ 0.87
SNRPA1-201ENST00000254193 HDAC6Q9UBN7 1215 aa20.46■□□□□ 0.87
SNRPA1-201ENST00000254193 DNAH12Q6ZR08 3092 aa20.46■□□□□ 0.87
SNRPA1-201ENST00000254193 UMODL1Q5DID0 1318 aa20.46■□□□□ 0.87
SNRPA1-201ENST00000254193 IGLV3-22A0A075B6J6 115 aa20.45■□□□□ 0.86
SNRPA1-201ENST00000254193 A0A1W2PPC1 479 aa20.45■□□□□ 0.86
SNRPA1-201ENST00000254193 H3BRB1 525 aa20.45■□□□□ 0.86
SNRPA1-201ENST00000254193 EDIL3O43854 480 aa20.45■□□□□ 0.86
SNRPA1-201ENST00000254193 FPGSQ05932 587 aa20.45■□□□□ 0.86
SNRPA1-201ENST00000254193 ITGB3BPQ13352 177 aaPredicted RBP20.45■□□□□ 0.86
SNRPA1-201ENST00000254193 GALNT17Q6IS24 598 aa20.45■□□□□ 0.86
SNRPA1-201ENST00000254193 GDF6Q6KF10 455 aaPredicted RBP20.45■□□□□ 0.86
SNRPA1-201ENST00000254193 MFSD5Q6N075 450 aa20.45■□□□□ 0.86
SNRPA1-201ENST00000254193 NIPA1Q7RTP0 329 aa20.45■□□□□ 0.86
SNRPA1-201ENST00000254193 SESTD1Q86VW0 696 aa20.45■□□□□ 0.86
SNRPA1-201ENST00000254193 TDHQ8IZJ6 230 aa20.45■□□□□ 0.86
SNRPA1-201ENST00000254193 FAM177A1Q8N128 213 aaPredicted RBP20.45■□□□□ 0.86
SNRPA1-201ENST00000254193 PHF20Q9BVI0 1012 aa20.45■□□□□ 0.86
SNRPA1-201ENST00000254193 TUT1Q9H6E5 874 aaKnown RBP20.45■□□□□ 0.86
SNRPA1-201ENST00000254193 GSTTP1A0A1W2PQM5 241 aa20.44■□□□□ 0.86
SNRPA1-201ENST00000254193 M0R2N6 131 aa20.44■□□□□ 0.86
SNRPA1-201ENST00000254193 XBP1P17861 261 aa20.44■□□□□ 0.86
SNRPA1-201ENST00000254193 TCF7P36402 384 aaPredicted RBP20.44■□□□□ 0.86
SNRPA1-201ENST00000254193 RABEP1Q15276 862 aa20.44■□□□□ 0.86
SNRPA1-201ENST00000254193 PTGISQ16647 500 aa20.44■□□□□ 0.86
SNRPA1-201ENST00000254193 CCDC83Q8IWF9 413 aa20.44■□□□□ 0.86
SNRPA1-201ENST00000254193 SEPT1Q8WYJ6 367 aa20.44■□□□□ 0.86
SNRPA1-201ENST00000254193 WASF1Q92558 559 aa20.44■□□□□ 0.86
SNRPA1-201ENST00000254193 SDF4Q9BRK5 362 aa20.44■□□□□ 0.86
SNRPA1-201ENST00000254193 JPH1Q9HDC5 661 aaPredicted RBP20.44■□□□□ 0.86
SNRPA1-201ENST00000254193 GTF2IRD1Q9UHL9 959 aa20.44■□□□□ 0.86
SNRPA1-201ENST00000254193 NOD1Q9Y239 953 aa20.44■□□□□ 0.86
SNRPA1-201ENST00000254193 TRIOBPQ9H2D6 2365 aa20.43■□□□□ 0.86
SNRPA1-201ENST00000254193 CSF2RAP15509 400 aa20.43■□□□□ 0.86
SNRPA1-201ENST00000254193 CIITAP33076 1130 aa20.43■□□□□ 0.86
SNRPA1-201ENST00000254193 CCL23P55773 120 aa20.43■□□□□ 0.86
SNRPA1-201ENST00000254193 SHHQ15465 462 aa20.43■□□□□ 0.86
SNRPA1-201ENST00000254193 PRR16Q569H4 304 aa20.43■□□□□ 0.86
SNRPA1-201ENST00000254193 C9orf50Q5SZB4 431 aa20.43■□□□□ 0.86
SNRPA1-201ENST00000254193 TBCKQ8TEA7 893 aa20.43■□□□□ 0.86
SNRPA1-201ENST00000254193 TBC1D32Q96NH3 1257 aa20.43■□□□□ 0.86
SNRPA1-201ENST00000254193 CTAGE1Q96RT6 745 aa20.43■□□□□ 0.86
SNRPA1-201ENST00000254193 SLC9A2Q9UBY0 812 aa20.43■□□□□ 0.86
SNRPA1-201ENST00000254193 KIAA1217Q5T5P2 1943 aa20.43■□□□□ 0.86
SNRPA1-201ENST00000254193 DDX39AO00148 427 aaKnown RBP20.42■□□□□ 0.86
SNRPA1-201ENST00000254193 FXR1P51114 621 aaKnown RBP eCLIP20.42■□□□□ 0.86
SNRPA1-201ENST00000254193 FOSBP53539 338 aa20.42■□□□□ 0.86
SNRPA1-201ENST00000254193 ZNF200P98182 395 aaPredicted RBP20.42■□□□□ 0.86
SNRPA1-201ENST00000254193 HIC1Q14526 733 aa20.42■□□□□ 0.86
SNRPA1-201ENST00000254193 TMEM199Q8N511 208 aa20.42■□□□□ 0.86
SNRPA1-201ENST00000254193 OXER1Q8TDS5 423 aa20.42■□□□□ 0.86
SNRPA1-201ENST00000254193 ZSCAN31Q96LW9 406 aaPredicted RBP20.42■□□□□ 0.86
SNRPA1-201ENST00000254193 WNT8AQ9H1J5 351 aa20.42■□□□□ 0.86
SNRPA1-201ENST00000254193 NFASCO94856 1347 aa20.42■□□□□ 0.86
SNRPA1-201ENST00000254193 IPO5O00410 1097 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms