RNA–Protein interactions for RNA: ENST00000251722.10

USP40-201, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP40, Length 5,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-201ENST00000251722 TTC1Q99614 292 aa13.86□□□□□ -0.19
USP40-201ENST00000251722 BLZF1Q9H2G9 400 aa13.86□□□□□ -0.19
USP40-201ENST00000251722 ST7Q9NRC1 585 aa13.86□□□□□ -0.19
USP40-201ENST00000251722 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.86□□□□□ -0.19
USP40-201ENST00000251722 KIAA1024Q9UPX6 916 aa13.86□□□□□ -0.19
USP40-201ENST00000251722 ZBTB22O15209 634 aa13.86□□□□□ -0.19
USP40-201ENST00000251722 SFNP31947 248 aa13.86□□□□□ -0.19
USP40-201ENST00000251722 ALX1Q15699 326 aa13.86□□□□□ -0.19
USP40-201ENST00000251722 MUM1Q2TAK8 710 aa13.86□□□□□ -0.19
USP40-201ENST00000251722 RNF207Q6ZRF8 634 aa13.86□□□□□ -0.19
USP40-201ENST00000251722 CEP170P1Q96L14 293 aa13.86□□□□□ -0.19
USP40-201ENST00000251722 ANXA13P27216 316 aa13.86□□□□□ -0.19
USP40-201ENST00000251722 DIXDC1Q155Q3 683 aa13.86□□□□□ -0.19
USP40-201ENST00000251722 EXOC3L4Q17RC7 722 aa13.86□□□□□ -0.19
USP40-201ENST00000251722 LCORLQ8N3X6 602 aa13.86□□□□□ -0.19
USP40-201ENST00000251722 OSBPL9Q96SU4 736 aa13.86□□□□□ -0.19
USP40-201ENST00000251722 PLA2G12BQ9BX93 195 aa13.86□□□□□ -0.19
USP40-201ENST00000251722 HAUS4Q9H6D7 363 aa13.86□□□□□ -0.19
USP40-201ENST00000251722 SLC26A4O43511 780 aa13.85□□□□□ -0.19
USP40-201ENST00000251722 MMP1P03956 469 aa13.85□□□□□ -0.19
USP40-201ENST00000251722 H2AFZP0C0S5 128 aa13.85□□□□□ -0.19
USP40-201ENST00000251722 H2AFVQ71UI9 128 aa13.85□□□□□ -0.19
USP40-201ENST00000251722 HYOU1Q9Y4L1 999 aa13.85□□□□□ -0.19
USP40-201ENST00000251722 MROH7-TTC4A0A0A0MT08 1334 aa13.85□□□□□ -0.19
USP40-201ENST00000251722 TCP1P17987 556 aaKnown RBP13.85□□□□□ -0.19
USP40-201ENST00000251722 KRT76Q01546 638 aa13.85□□□□□ -0.19
USP40-201ENST00000251722 RNASELQ05823 741 aaKnown RBP13.85□□□□□ -0.19
USP40-201ENST00000251722 ACBD5Q5T8D3 534 aaPredicted RBP13.85□□□□□ -0.19
USP40-201ENST00000251722 EDC3Q96F86 508 aaKnown RBP13.85□□□□□ -0.19
USP40-201ENST00000251722 TLDC2A0PJX2 215 aa13.85□□□□□ -0.19
USP40-201ENST00000251722 C21orf2O43822 256 aa13.85□□□□□ -0.19
USP40-201ENST00000251722 CYP2E1P05181 493 aaPredicted RBP13.85□□□□□ -0.19
USP40-201ENST00000251722 GARSP41250 739 aaKnown RBP13.85□□□□□ -0.19
USP40-201ENST00000251722 SYMPKQ92797 1274 aaKnown RBP13.85□□□□□ -0.19
USP40-201ENST00000251722 ISCA1Q9BUE6 129 aa13.85□□□□□ -0.19
USP40-201ENST00000251722 CD209Q9NNX6 404 aa13.85□□□□□ -0.19
USP40-201ENST00000251722 GDF11O95390 407 aa13.85□□□□□ -0.19
USP40-201ENST00000251722 CIITAP33076 1130 aa13.85□□□□□ -0.19
USP40-201ENST00000251722 KIAA1841Q6NSI8 718 aa13.85□□□□□ -0.19
USP40-201ENST00000251722 ABTB1Q969K4 478 aaPredicted RBP13.85□□□□□ -0.19
USP40-201ENST00000251722 MTMR6Q9Y217 621 aa13.85□□□□□ -0.19
USP40-201ENST00000251722 ASB14A6NK59 587 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 EFCAB8A8MWE9 144 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 BTBD18B2RXH4 712 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 RPSAP08865 295 aaKnown RBP13.84□□□□□ -0.19
USP40-201ENST00000251722 ELF1P32519 619 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 DYNLL1P63167 89 aaKnown RBP13.84□□□□□ -0.19
USP40-201ENST00000251722 PHLDB3Q6NSJ2 640 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 MXD3Q9BW11 206 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 C2orf40Q9H1Z8 148 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 PALD1Q9ULE6 856 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 DIP2AQ14689 1571 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 PNOCQ13519 176 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 RASGRF1Q13972 1273 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 AFPP02771 609 aaKnown RBP13.84□□□□□ -0.19
USP40-201ENST00000251722 IGBP1P78318 339 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 COG7P83436 770 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 RBM46Q8TBY0 533 aaKnown RBP13.84□□□□□ -0.19
USP40-201ENST00000251722 NLRP7Q8WX94 980 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 PIGSQ96S52 555 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 MRPL47Q9HD33 250 aaKnown RBP13.84□□□□□ -0.19
USP40-201ENST00000251722 MINPP1Q9UNW1 487 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 UTYO14607 1347 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 INO80B-WBP1J3KQ70 363 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 STMN1P16949 149 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 UAP1Q16222 522 aaPredicted RBP13.84□□□□□ -0.19
USP40-201ENST00000251722 CCDC68Q9H2F9 335 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 PARVGQ9HBI0 331 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 FAM8A1Q9UBU6 413 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 SCOCQ9UIL1 159 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 MORC2Q9Y6X9 1032 aaPredicted RBP13.84□□□□□ -0.19
USP40-201ENST00000251722 GOLGA8QA0A0J9YX86 632 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 GOLGA8OA6NCC3 632 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 USP17L10C9JJH3 530 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 GOLGA8NF8WBI6 632 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 HSPA6P17066 643 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 LONRF2Q1L5Z9 754 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 KCTD1Q719H9 257 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 NSUN6Q8TEA1 469 aaKnown RBP13.84□□□□□ -0.19
USP40-201ENST00000251722 TBCKQ8TEA7 893 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 ANKFY1Q9P2R3 1169 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 MYO1AQ9UBC5 1043 aa13.84□□□□□ -0.19
USP40-201ENST00000251722 hCG_1642624A0A1W2PR95 340 aa13.83□□□□□ -0.2
USP40-201ENST00000251722 GOLGA8KD6RF30 607 aa13.83□□□□□ -0.2
USP40-201ENST00000251722 HHATQ5VTY9 493 aa13.83□□□□□ -0.2
USP40-201ENST00000251722 BCAS4Q8TDM0 211 aa13.83□□□□□ -0.2
USP40-201ENST00000251722 USP28Q96RU2 1077 aa13.83□□□□□ -0.2
USP40-201ENST00000251722 ERCC6L2Q5T890 1561 aa13.83□□□□□ -0.2
USP40-201ENST00000251722 POLE2P56282 527 aa13.83□□□□□ -0.2
USP40-201ENST00000251722 SCRN1Q12765 414 aa13.83□□□□□ -0.2
USP40-201ENST00000251722 MORC4Q8TE76 937 aa13.83□□□□□ -0.2
USP40-201ENST00000251722 CDKL2Q92772 493 aa13.83□□□□□ -0.2
USP40-201ENST00000251722 FAM20AQ96MK3 541 aa13.83□□□□□ -0.2
USP40-201ENST00000251722 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.83□□□□□ -0.2
USP40-201ENST00000251722 TOPORSQ9NS56 1045 aaPredicted RBP13.83□□□□□ -0.2
USP40-201ENST00000251722 FAM207AQ9NSI2 230 aaPredicted RBP13.83□□□□□ -0.2
USP40-201ENST00000251722 FAN1Q9Y2M0 1017 aa13.83□□□□□ -0.2
USP40-201ENST00000251722 FKBP3Q00688 224 aaKnown RBP13.83□□□□□ -0.2
USP40-201ENST00000251722 SLC30A9Q6PML9 568 aa13.83□□□□□ -0.2
USP40-201ENST00000251722 ARHGEF1Q92888 912 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms