RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 CYP2W1Q8TAV3 490 aa27.95■■■□□ 2.07
TMEM55B-201ENST00000250489 SIK3Q9Y2K2 1263 aa27.95■■■□□ 2.07
TMEM55B-201ENST00000250489 SMCHD1A6NHR9 2005 aa27.95■■■□□ 2.06
TMEM55B-201ENST00000250489 PLA2G6O60733 806 aa27.95■■■□□ 2.06
TMEM55B-201ENST00000250489 ZNF76P36508 570 aa27.95■■■□□ 2.06
TMEM55B-201ENST00000250489 SF3B2Q13435 895 aaKnown RBP27.95■■■□□ 2.06
TMEM55B-201ENST00000250489 KIF4BQ2VIQ3 1234 aa27.95■■■□□ 2.06
TMEM55B-201ENST00000250489 UBXN4Q92575 508 aa27.95■■■□□ 2.06
TMEM55B-201ENST00000250489 SH2D4AQ9H788 454 aa27.95■■■□□ 2.06
TMEM55B-201ENST00000250489 TBC1D7Q9P0N9 293 aa27.95■■■□□ 2.06
TMEM55B-201ENST00000250489 IGLV3-22A0A075B6J6 115 aa27.94■■■□□ 2.06
TMEM55B-201ENST00000250489 PPP2R3AQ06190 1150 aa27.94■■■□□ 2.06
TMEM55B-201ENST00000250489 HERC4Q5GLZ8 1057 aaPredicted RBP27.94■■■□□ 2.06
TMEM55B-201ENST00000250489 TBC1D5Q92609 795 aa27.94■■■□□ 2.06
TMEM55B-201ENST00000250489 CFBP00751 764 aa27.93■■■□□ 2.06
TMEM55B-201ENST00000250489 PSMC6P62333 389 aa27.93■■■□□ 2.06
TMEM55B-201ENST00000250489 FKBP3Q00688 224 aaKnown RBP27.93■■■□□ 2.06
TMEM55B-201ENST00000250489 ZYXQ15942 572 aaKnown RBP27.93■■■□□ 2.06
TMEM55B-201ENST00000250489 FAM160B2Q86V87 743 aa27.93■■■□□ 2.06
TMEM55B-201ENST00000250489 ZNHIT6Q9NWK9 470 aaKnown RBP27.93■■■□□ 2.06
TMEM55B-201ENST00000250489 MYO1AQ9UBC5 1043 aa27.93■■■□□ 2.06
TMEM55B-201ENST00000250489 DNM3Q9UQ16 869 aa27.93■■■□□ 2.06
TMEM55B-201ENST00000250489 KRT18P05783 430 aaKnown RBP27.93■■■□□ 2.06
TMEM55B-201ENST00000250489 MAP3K10Q02779 954 aa27.93■■■□□ 2.06
TMEM55B-201ENST00000250489 RAD51AP2Q09MP3 1159 aa27.93■■■□□ 2.06
TMEM55B-201ENST00000250489 SLC35F6Q8N357 371 aa27.93■■■□□ 2.06
TMEM55B-201ENST00000250489 SYT2Q8N9I0 419 aaPredicted RBP27.93■■■□□ 2.06
TMEM55B-201ENST00000250489 GCOM1H8Y6P7 765 aaPredicted RBP27.92■■■□□ 2.06
TMEM55B-201ENST00000250489 MEIS1O00470 390 aa27.92■■■□□ 2.06
TMEM55B-201ENST00000250489 WNT10BO00744 389 aa27.92■■■□□ 2.06
TMEM55B-201ENST00000250489 POLR2MP0CAP2 368 aa27.92■■■□□ 2.06
TMEM55B-201ENST00000250489 H2AFXP16104 143 aaPredicted RBP27.92■■■□□ 2.06
TMEM55B-201ENST00000250489 NBPF9Q3BBW0 867 aa27.92■■■□□ 2.06
TMEM55B-201ENST00000250489 GLIS2Q9BZE0 524 aaPredicted RBP27.92■■■□□ 2.06
TMEM55B-201ENST00000250489 HERVK_113P62684 666 aa27.91■■■□□ 2.06
TMEM55B-201ENST00000250489 SCFD1Q8WVM8 642 aa27.91■■■□□ 2.06
TMEM55B-201ENST00000250489 FEZ1Q99689 392 aa27.91■■■□□ 2.06
TMEM55B-201ENST00000250489 COL4A3BPQ9Y5P4 624 aa27.91■■■□□ 2.06
TMEM55B-201ENST00000250489 TRAF5O00463 557 aa27.91■■■□□ 2.06
TMEM55B-201ENST00000250489 KIF20AO95235 890 aa27.91■■■□□ 2.06
TMEM55B-201ENST00000250489 CDK17Q00537 523 aa27.91■■■□□ 2.06
TMEM55B-201ENST00000250489 PABPC4Q13310 644 aaKnown RBP eCLIP27.91■■■□□ 2.066e-14■■■■□ 22.8
TMEM55B-201ENST00000250489 GIT2Q14161 759 aa27.91■■■□□ 2.06
TMEM55B-201ENST00000250489 CEP63Q96MT8 703 aa27.91■■■□□ 2.06
TMEM55B-201ENST00000250489 POLR3CQ9BUI4 534 aaPredicted RBP27.91■■■□□ 2.06
TMEM55B-201ENST00000250489 WDR18Q9BV38 432 aa27.91■■■□□ 2.06
TMEM55B-201ENST00000250489 PIM2Q9P1W9 311 aa27.91■■■□□ 2.06
TMEM55B-201ENST00000250489 FEM1BQ9UK73 627 aa27.91■■■□□ 2.06
TMEM55B-201ENST00000250489 MRPL11Q9Y3B7 192 aaKnown RBP27.91■■■□□ 2.06
TMEM55B-201ENST00000250489 CCDC84Q86UT8 332 aaPredicted RBP27.9■■■□□ 2.06
TMEM55B-201ENST00000250489 NELFCDQ8IXH7 590 aa27.9■■■□□ 2.06
TMEM55B-201ENST00000250489 KCTD10Q9H3F6 313 aa27.9■■■□□ 2.06
TMEM55B-201ENST00000250489 EMILIN3Q9NT22 766 aa27.9■■■□□ 2.06
TMEM55B-201ENST00000250489 GOLGB1Q14789 3259 aaKnown RBP27.9■■■□□ 2.06
TMEM55B-201ENST00000250489 CTAGE9A4FU28 777 aa27.9■■■□□ 2.06
TMEM55B-201ENST00000250489 EML1O00423 815 aa27.9■■■□□ 2.06
TMEM55B-201ENST00000250489 CYLC1P35663 651 aaPredicted RBP27.9■■■□□ 2.06
TMEM55B-201ENST00000250489 CIAPIN1Q6FI81 312 aa27.9■■■□□ 2.06
TMEM55B-201ENST00000250489 CCDC170Q8IYT3 715 aa27.9■■■□□ 2.06
TMEM55B-201ENST00000250489 EIF2AK1Q9BQI3 630 aaKnown RBP27.9■■■□□ 2.06
TMEM55B-201ENST00000250489 NHEJ1Q9H9Q4 299 aaPredicted RBP27.9■■■□□ 2.06
TMEM55B-201ENST00000250489 MYOZ2Q9NPC6 264 aa27.9■■■□□ 2.06
TMEM55B-201ENST00000250489 EPHB6O15197 1021 aa27.89■■■□□ 2.06
TMEM55B-201ENST00000250489 ASNSP08243 561 aa27.89■■■□□ 2.06
TMEM55B-201ENST00000250489 KRT83P78385 493 aa27.89■■■□□ 2.06
TMEM55B-201ENST00000250489 HAUS4Q9H6D7 363 aa27.89■■■□□ 2.06
TMEM55B-201ENST00000250489 FBXO28Q9NVF7 368 aa27.89■■■□□ 2.06
TMEM55B-201ENST00000250489 HNRNPH3P31942 346 aaKnown RBP27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 CYP4A11Q02928 519 aa27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 ZC3H3Q8IXZ2 948 aaKnown RBP27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 REEP2Q9BRK0 252 aa27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 ZHX3Q9H4I2 956 aa27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 FAM207AQ9NSI2 230 aaPredicted RBP27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 CDC23Q9UJX2 597 aa27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 SHTN1A0MZ66 631 aa27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 EIF3CLB5ME19 914 aaKnown RBP27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 TGFB2P61812 414 aa27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 TUBB2AQ13885 445 aa27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 CCDC40Q4G0X9 1142 aa27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 ZNF662Q6ZS27 426 aa27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 RSRC2Q7L4I2 434 aaKnown RBP27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 EIF3CQ99613 913 aaKnown RBP27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 NAPGQ99747 312 aaPredicted RBP27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 TUBB2BQ9BVA1 445 aa27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 MMRN2Q9H8L6 949 aa27.88■■■□□ 2.05
TMEM55B-201ENST00000250489 GNA14O95837 355 aa27.87■■■□□ 2.05
TMEM55B-201ENST00000250489 LDHDQ86WU2 507 aa27.87■■■□□ 2.05
TMEM55B-201ENST00000250489 KCTD17Q8N5Z5 321 aa27.87■■■□□ 2.05
TMEM55B-201ENST00000250489 EHMT1Q9H9B1 1298 aa27.87■■■□□ 2.05
TMEM55B-201ENST00000250489 TRIM10Q9UDY6 481 aa27.87■■■□□ 2.05
TMEM55B-201ENST00000250489 PLAGL2Q9UPG8 496 aa27.87■■■□□ 2.05
TMEM55B-201ENST00000250489 ERCC3P19447 782 aa27.86■■■□□ 2.05
TMEM55B-201ENST00000250489 MARSP56192 900 aaKnown RBP27.86■■■□□ 2.05
TMEM55B-201ENST00000250489 OTOP1Q7RTM1 612 aa27.86■■■□□ 2.05
TMEM55B-201ENST00000250489 SLC5A5Q92911 643 aa27.86■■■□□ 2.05
TMEM55B-201ENST00000250489 DDX41Q9UJV9 622 aaKnown RBP27.86■■■□□ 2.05
TMEM55B-201ENST00000250489 PSMD10O75832 226 aa27.86■■■□□ 2.05
TMEM55B-201ENST00000250489 EYA4O95677 639 aa27.86■■■□□ 2.05
TMEM55B-201ENST00000250489 SAMD1Q6SPF0 538 aaPredicted RBP27.86■■■□□ 2.05
TMEM55B-201ENST00000250489 PPP4R3CPQ6ZMV5 832 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms