RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 CCDC84Q86UT8 332 aaPredicted RBP24.05■■□□□ 1.44
CLN6-201ENST00000249806 GLIS2Q9BZE0 524 aaPredicted RBP24.05■■□□□ 1.44
CLN6-201ENST00000249806 GUCA1BQ9UMX6 200 aa24.05■■□□□ 1.44
CLN6-201ENST00000249806 KRT18P05783 430 aaKnown RBP24.04■■□□□ 1.44
CLN6-201ENST00000249806 RPA1P27694 616 aa24.04■■□□□ 1.44
CLN6-201ENST00000249806 CYP4A11Q02928 519 aa24.04■■□□□ 1.44
CLN6-201ENST00000249806 CCDC155Q8N6L0 562 aa24.04■■□□□ 1.44
CLN6-201ENST00000249806 FAM20AQ96MK3 541 aa24.04■■□□□ 1.44
CLN6-201ENST00000249806 NHEJ1Q9H9Q4 299 aaPredicted RBP24.04■■□□□ 1.44
CLN6-201ENST00000249806 ZNHIT6Q9NWK9 470 aaKnown RBP24.04■■□□□ 1.44
CLN6-201ENST00000249806 ZNF446Q9NWS9 450 aa24.04■■□□□ 1.44
CLN6-201ENST00000249806 DDX41Q9UJV9 622 aaKnown RBP24.04■■□□□ 1.44
CLN6-201ENST00000249806 ZNRF3Q9ULT6 936 aa24.04■■□□□ 1.44
CLN6-201ENST00000249806 CTAGE9A4FU28 777 aa24.04■■□□□ 1.44
CLN6-201ENST00000249806 FKBP3Q00688 224 aaKnown RBP24.04■■□□□ 1.44
CLN6-201ENST00000249806 FIGNQ5HY92 759 aa24.04■■□□□ 1.44
CLN6-201ENST00000249806 ERMNQ8TAM6 284 aa24.04■■□□□ 1.44
CLN6-201ENST00000249806 SCFD1Q8WVM8 642 aa24.04■■□□□ 1.44
CLN6-201ENST00000249806 ZSWIM4Q9H7M6 989 aa24.04■■□□□ 1.44
CLN6-201ENST00000249806 MMRN2Q9H8L6 949 aa24.04■■□□□ 1.44
CLN6-201ENST00000249806 TFRCP02786 760 aaKnown RBP24.03■■□□□ 1.44
CLN6-201ENST00000249806 CLCN6P51797 869 aa24.03■■□□□ 1.44
CLN6-201ENST00000249806 NBPF9Q3BBW0 867 aa24.03■■□□□ 1.44
CLN6-201ENST00000249806 VAV3Q9UKW4 847 aa24.03■■□□□ 1.44
CLN6-201ENST00000249806 DNM3Q9UQ16 869 aa24.03■■□□□ 1.44
CLN6-201ENST00000249806 A0A1W2PQJ5 194 aa24.03■■□□□ 1.44
CLN6-201ENST00000249806 SHTN1A0MZ66 631 aa24.03■■□□□ 1.44
CLN6-201ENST00000249806 SLC26A4O43511 780 aa24.03■■□□□ 1.44
CLN6-201ENST00000249806 CYP3A4P08684 503 aa24.03■■□□□ 1.44
CLN6-201ENST00000249806 HOXA7P31268 230 aaPredicted RBP24.03■■□□□ 1.44
CLN6-201ENST00000249806 CXCL9Q07325 125 aa24.03■■□□□ 1.44
CLN6-201ENST00000249806 TEX35Q5T0J7 233 aa24.03■■□□□ 1.44
CLN6-201ENST00000249806 VCPKMTQ9H867 229 aa24.03■■□□□ 1.44
CLN6-201ENST00000249806 EMILIN3Q9NT22 766 aa24.03■■□□□ 1.44
CLN6-201ENST00000249806 FBXO28Q9NVF7 368 aa24.03■■□□□ 1.44
CLN6-201ENST00000249806 ABCB11O95342 1321 aa24.02■■□□□ 1.44
CLN6-201ENST00000249806 IGLV3-22A0A075B6J6 115 aa24.02■■□□□ 1.44
CLN6-201ENST00000249806 EML1O00423 815 aa24.02■■□□□ 1.44
CLN6-201ENST00000249806 UBXN2AP68543 259 aa24.02■■□□□ 1.44
CLN6-201ENST00000249806 RSRC2Q7L4I2 434 aaKnown RBP24.02■■□□□ 1.44
CLN6-201ENST00000249806 NIM1KQ8IY84 436 aa24.02■■□□□ 1.44
CLN6-201ENST00000249806 ZFP91Q96JP5 570 aaPredicted RBP24.02■■□□□ 1.44
CLN6-201ENST00000249806 CDC23Q9UJX2 597 aa24.02■■□□□ 1.44
CLN6-201ENST00000249806 FRMD3A2A2Y4 597 aa24.02■■□□□ 1.44
CLN6-201ENST00000249806 PLEKP08567 350 aaPredicted RBP24.02■■□□□ 1.44
CLN6-201ENST00000249806 CAP2P40123 477 aa24.02■■□□□ 1.44
CLN6-201ENST00000249806 GIT2Q14161 759 aa24.02■■□□□ 1.44
CLN6-201ENST00000249806 GLIPR1L2Q4G1C9 344 aa24.02■■□□□ 1.44
CLN6-201ENST00000249806 FOXR2Q6PJQ5 311 aa24.02■■□□□ 1.44
CLN6-201ENST00000249806 SYT2Q8N9I0 419 aaPredicted RBP24.02■■□□□ 1.44
CLN6-201ENST00000249806 TANGO6Q9C0B7 1094 aa24.02■■□□□ 1.44
CLN6-201ENST00000249806 POLD4Q9HCU8 107 aa24.02■■□□□ 1.44
CLN6-201ENST00000249806 RGL1Q9NZL6 768 aa24.02■■□□□ 1.44
CLN6-201ENST00000249806 COL4A3BPQ9Y5P4 624 aa24.02■■□□□ 1.44
CLN6-201ENST00000249806 WNT10BO00744 389 aa24.01■■□□□ 1.43
CLN6-201ENST00000249806 AGBL3Q8NEM8 1001 aa24.01■■□□□ 1.43
CLN6-201ENST00000249806 CHURC1Q8WUH1 139 aa24.01■■□□□ 1.43
CLN6-201ENST00000249806 WDR18Q9BV38 432 aa24.01■■□□□ 1.43
CLN6-201ENST00000249806 RANBP17Q9H2T7 1088 aaKnown RBP24.01■■□□□ 1.43
CLN6-201ENST00000249806 KCTD10Q9H3F6 313 aa24.01■■□□□ 1.43
CLN6-201ENST00000249806 OGFRQ9NZT2 677 aa24.01■■□□□ 1.43
CLN6-201ENST00000249806 MYO1AQ9UBC5 1043 aa24.01■■□□□ 1.43
CLN6-201ENST00000249806 PUF60Q9UHX1 559 aaKnown RBP24.01■■□□□ 1.43
CLN6-201ENST00000249806 PITPNM2Q9BZ72 1349 aa24.01■■□□□ 1.43
CLN6-201ENST00000249806 RCCD1A6NED2 376 aa24■■□□□ 1.43
CLN6-201ENST00000249806 TBC1D12O60347 775 aa24■■□□□ 1.43
CLN6-201ENST00000249806 CASP5P51878 434 aa24■■□□□ 1.43
CLN6-201ENST00000249806 CYP27A1Q02318 531 aa24■■□□□ 1.43
CLN6-201ENST00000249806 FKBP1CQ5VVH2 108 aa24■■□□□ 1.43
CLN6-201ENST00000249806 GPIHBP1Q8IV16 184 aa24■■□□□ 1.43
CLN6-201ENST00000249806 NAPGQ99747 312 aaPredicted RBP24■■□□□ 1.43
CLN6-201ENST00000249806 REEP2Q9BRK0 252 aa24■■□□□ 1.43
CLN6-201ENST00000249806 CYLC1P35663 651 aaPredicted RBP24■■□□□ 1.43
CLN6-201ENST00000249806 CCDC40Q4G0X9 1142 aa24■■□□□ 1.43
CLN6-201ENST00000249806 CCDC122Q5T0U0 273 aa24■■□□□ 1.43
CLN6-201ENST00000249806 SMCR8Q8TEV9 937 aaPredicted RBP24■■□□□ 1.43
CLN6-201ENST00000249806 EIF2AK1Q9BQI3 630 aaKnown RBP24■■□□□ 1.43
CLN6-201ENST00000249806 HAUS4Q9H6D7 363 aa24■■□□□ 1.43
CLN6-201ENST00000249806 PGAP2Q9UHJ9 254 aa24■■□□□ 1.43
CLN6-201ENST00000249806 PLAGL2Q9UPG8 496 aa24■■□□□ 1.43
CLN6-201ENST00000249806 GCOM1H8Y6P7 765 aaPredicted RBP23.99■■□□□ 1.43
CLN6-201ENST00000249806 POLR2MP0CAP2 368 aa23.99■■□□□ 1.43
CLN6-201ENST00000249806 KRT83P78385 493 aa23.99■■□□□ 1.43
CLN6-201ENST00000249806 FAM83AQ86UY5 434 aa23.99■■□□□ 1.43
CLN6-201ENST00000249806 MTMR14Q8NCE2 650 aa23.99■■□□□ 1.43
CLN6-201ENST00000249806 LACRTQ9GZZ8 138 aa23.99■■□□□ 1.43
CLN6-201ENST00000249806 BHMT2Q9H2M3 363 aa23.99■■□□□ 1.43
CLN6-201ENST00000249806 BCAS3Q9H6U6 928 aa23.99■■□□□ 1.43
CLN6-201ENST00000249806 KCNMA1Q12791 1236 aa23.99■■□□□ 1.43
CLN6-201ENST00000249806 KIAA1328Q86T90 577 aa23.99■■□□□ 1.43
CLN6-201ENST00000249806 CCDC170Q8IYT3 715 aa23.99■■□□□ 1.43
CLN6-201ENST00000249806 EIF3CLB5ME19 914 aaKnown RBP23.98■■□□□ 1.43
CLN6-201ENST00000249806 SRGAP1Q7Z6B7 1085 aa23.98■■□□□ 1.43
CLN6-201ENST00000249806 EIF3CQ99613 913 aaKnown RBP23.98■■□□□ 1.43
CLN6-201ENST00000249806 ARHGAP20Q9P2F6 1191 aa23.98■■□□□ 1.43
CLN6-201ENST00000249806 RSPH10B2B2RC85 870 aa23.98■■□□□ 1.43
CLN6-201ENST00000249806 RSPH10BP0C881 870 aa23.98■■□□□ 1.43
CLN6-201ENST00000249806 ZSCAN20P17040 1043 aaPredicted RBP23.98■■□□□ 1.43
CLN6-201ENST00000249806 TRAF1Q13077 416 aa23.98■■□□□ 1.43
CLN6-201ENST00000249806 OTOP1Q7RTM1 612 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms