RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 PBX1P40424 430 aa26.08■■□□□ 1.77
SYNGR3-201ENST00000248121 KRT31Q15323 416 aa26.08■■□□□ 1.77
SYNGR3-201ENST00000248121 CNNM4Q6P4Q7 775 aa26.08■■□□□ 1.77
SYNGR3-201ENST00000248121 NSMFQ6X4W1 530 aa26.08■■□□□ 1.77
SYNGR3-201ENST00000248121 DYMQ7RTS9 669 aa26.08■■□□□ 1.77
SYNGR3-201ENST00000248121 DNTTIP2Q5QJE6 756 aaKnown RBP26.07■■□□□ 1.76
SYNGR3-201ENST00000248121 TTI2Q6NXR4 508 aa26.07■■□□□ 1.76
SYNGR3-201ENST00000248121 UNC13DQ70J99 1090 aa26.07■■□□□ 1.76
SYNGR3-201ENST00000248121 TMX1Q9H3N1 280 aa26.07■■□□□ 1.76
SYNGR3-201ENST00000248121 GBA2Q9HCG7 927 aaPredicted RBP26.07■■□□□ 1.76
SYNGR3-201ENST00000248121 HOXC10Q9NYD6 342 aa26.07■■□□□ 1.76
SYNGR3-201ENST00000248121 POTEB3A0JP26 581 aa26.07■■□□□ 1.76
SYNGR3-201ENST00000248121 PSMA7O14818 248 aa26.07■■□□□ 1.76
SYNGR3-201ENST00000248121 MED24O75448 989 aa26.07■■□□□ 1.76
SYNGR3-201ENST00000248121 POTEBQ6S5H4 581 aa26.07■■□□□ 1.76
SYNGR3-201ENST00000248121 CCDC47Q96A33 483 aaKnown RBP26.07■■□□□ 1.76
SYNGR3-201ENST00000248121 SLC10A4Q96EP9 437 aa26.07■■□□□ 1.76
SYNGR3-201ENST00000248121 TAAR1Q96RJ0 339 aa26.07■■□□□ 1.76
SYNGR3-201ENST00000248121 CTAGE1Q96RT6 745 aa26.07■■□□□ 1.76
SYNGR3-201ENST00000248121 ASCC2Q9H1I8 757 aaPredicted RBP26.07■■□□□ 1.76
SYNGR3-201ENST00000248121 R3HDMLQ9H3Y0 253 aa26.07■■□□□ 1.76
SYNGR3-201ENST00000248121 MYPNQ86TC9 1320 aa26.06■■□□□ 1.76
SYNGR3-201ENST00000248121 RPTORQ8N122 1335 aa26.06■■□□□ 1.76
SYNGR3-201ENST00000248121 KDM3AQ9Y4C1 1321 aa26.06■■□□□ 1.76
SYNGR3-201ENST00000248121 TRPM7Q96QT4 1865 aa26.06■■□□□ 1.76
SYNGR3-201ENST00000248121 PVALEFA0A1B0GWK0 134 aa26.06■■□□□ 1.76
SYNGR3-201ENST00000248121 HOXA7P31268 230 aaPredicted RBP26.06■■□□□ 1.76
SYNGR3-201ENST00000248121 STIM1Q13586 685 aa26.06■■□□□ 1.76
SYNGR3-201ENST00000248121 TCP11X2Q5H9J9 407 aa26.06■■□□□ 1.76
SYNGR3-201ENST00000248121 GPAT2Q6NUI2 795 aa26.06■■□□□ 1.76
SYNGR3-201ENST00000248121 DDX12PQ92771 950 aa26.06■■□□□ 1.76
SYNGR3-201ENST00000248121 DHTKD1Q96HY7 919 aaPredicted RBP26.06■■□□□ 1.76
SYNGR3-201ENST00000248121 FAM20AQ96MK3 541 aa26.06■■□□□ 1.76
SYNGR3-201ENST00000248121 TEX13BQ9BXU2 312 aa26.06■■□□□ 1.76
SYNGR3-201ENST00000248121 NT5C3AQ9H0P0 336 aa26.06■■□□□ 1.76
SYNGR3-201ENST00000248121 AGTPBP1Q9UPW5 1226 aa26.06■■□□□ 1.76
SYNGR3-201ENST00000248121 KIAA1024Q9UPX6 916 aa26.06■■□□□ 1.76
SYNGR3-201ENST00000248121 E9PMD0 336 aa26.05■■□□□ 1.76
SYNGR3-201ENST00000248121 ATP2A1O14983 1001 aa26.05■■□□□ 1.76
SYNGR3-201ENST00000248121 OAZ1P54368 228 aa26.05■■□□□ 1.76
SYNGR3-201ENST00000248121 EHHADHQ08426 723 aa26.05■■□□□ 1.76
SYNGR3-201ENST00000248121 COBLL1Q53SF7 1204 aa26.05■■□□□ 1.76
SYNGR3-201ENST00000248121 LBX2Q6XYB7 198 aa26.05■■□□□ 1.76
SYNGR3-201ENST00000248121 MCF2L2Q86YR7 1114 aa26.05■■□□□ 1.76
SYNGR3-201ENST00000248121 DUSP9Q99956 384 aaKnown RBP26.05■■□□□ 1.76
SYNGR3-201ENST00000248121 VAV3Q9UKW4 847 aa26.05■■□□□ 1.76
SYNGR3-201ENST00000248121 KCNJ18B7U540 433 aa26.05■■□□□ 1.76
SYNGR3-201ENST00000248121 ZNF76P36508 570 aa26.05■■□□□ 1.76
SYNGR3-201ENST00000248121 BAATQ14032 418 aaPredicted RBP26.05■■□□□ 1.76
SYNGR3-201ENST00000248121 KCNJ12Q14500 433 aa26.05■■□□□ 1.76
SYNGR3-201ENST00000248121 CST9Q5W186 159 aa26.05■■□□□ 1.76
SYNGR3-201ENST00000248121 RNF207Q6ZRF8 634 aa26.05■■□□□ 1.76
SYNGR3-201ENST00000248121 DNAJC19Q96DA6 116 aa26.05■■□□□ 1.76
SYNGR3-201ENST00000248121 SLC39A2Q9NP94 309 aa26.04■■□□□ 1.76
SYNGR3-201ENST00000248121 KCND1Q9NSA2 647 aa26.04■■□□□ 1.76
SYNGR3-201ENST00000248121 SLC26A4O43511 780 aa26.03■■□□□ 1.76
SYNGR3-201ENST00000248121 EIF2AK2P19525 551 aaKnown RBP26.03■■□□□ 1.76
SYNGR3-201ENST00000248121 TMEM139Q8IV31 216 aa26.03■■□□□ 1.76
SYNGR3-201ENST00000248121 TC2NQ8N9U0 490 aa26.03■■□□□ 1.76
SYNGR3-201ENST00000248121 P2RX5Q93086 422 aa26.03■■□□□ 1.76
SYNGR3-201ENST00000248121 CNMDO75829 334 aa26.03■■□□□ 1.76
SYNGR3-201ENST00000248121 ITGBL1O95965 494 aaPredicted RBP26.03■■□□□ 1.76
SYNGR3-201ENST00000248121 SPATA31C1P0DKV0 1188 aa26.03■■□□□ 1.76
SYNGR3-201ENST00000248121 CCNE1P24864 410 aa26.03■■□□□ 1.76
SYNGR3-201ENST00000248121 COPB1P53618 953 aaKnown RBP26.03■■□□□ 1.76
SYNGR3-201ENST00000248121 IRX3P78415 501 aaPredicted RBP26.03■■□□□ 1.76
SYNGR3-201ENST00000248121 SPAG1Q07617 926 aa26.03■■□□□ 1.76
SYNGR3-201ENST00000248121 E4F1Q66K89 784 aaPredicted RBP26.03■■□□□ 1.76
SYNGR3-201ENST00000248121 CATSPER3Q86XQ3 398 aa26.03■■□□□ 1.76
SYNGR3-201ENST00000248121 PAGR1Q9BTK6 254 aa26.03■■□□□ 1.76
SYNGR3-201ENST00000248121 TXNRD2Q9NNW7 524 aa26.03■■□□□ 1.76
SYNGR3-201ENST00000248121 HERVK_113P62684 666 aa26.02■■□□□ 1.76
SYNGR3-201ENST00000248121 ANKRD40Q6AI12 368 aa26.02■■□□□ 1.76
SYNGR3-201ENST00000248121 NCAPH2Q6IBW4 605 aa26.02■■□□□ 1.76
SYNGR3-201ENST00000248121 CCAR2Q8N163 923 aaKnown RBP26.02■■□□□ 1.76
SYNGR3-201ENST00000248121 SRRTQ9BXP5 876 aaKnown RBP26.02■■□□□ 1.76
SYNGR3-201ENST00000248121 GTPBP4Q9BZE4 634 aaKnown RBP26.02■■□□□ 1.76
SYNGR3-201ENST00000248121 TAB2Q9NYJ8 693 aa26.02■■□□□ 1.76
SYNGR3-201ENST00000248121 POTEFA5A3E0 1075 aa26.02■■□□□ 1.76
SYNGR3-201ENST00000248121 ARP10275 920 aa26.02■■□□□ 1.76
SYNGR3-201ENST00000248121 ITGB5P18084 799 aa26.02■■□□□ 1.76
SYNGR3-201ENST00000248121 POTEGQ6S5H5 508 aa26.02■■□□□ 1.76
SYNGR3-201ENST00000248121 TRIM47Q96LD4 638 aa26.02■■□□□ 1.76
SYNGR3-201ENST00000248121 C16orf45Q96MC5 204 aaPredicted RBP26.02■■□□□ 1.76
SYNGR3-201ENST00000248121 LRRC27Q9C0I9 530 aa26.02■■□□□ 1.76
SYNGR3-201ENST00000248121 THAP9Q9H5L6 903 aa26.02■■□□□ 1.76
SYNGR3-201ENST00000248121 A1CFQ9NQ94 594 aaKnown RBP26.02■■□□□ 1.76
SYNGR3-201ENST00000248121 FRMPD4Q14CM0 1322 aa26.02■■□□□ 1.76
SYNGR3-201ENST00000248121 PLA2G4BP0C869 781 aa26.01■■□□□ 1.75
SYNGR3-201ENST00000248121 MRPS9P82933 396 aaKnown RBP26.01■■□□□ 1.75
SYNGR3-201ENST00000248121 FILIP1LQ4L180 1135 aa26.01■■□□□ 1.75
SYNGR3-201ENST00000248121 VPS16Q9H269 839 aa26.01■■□□□ 1.75
SYNGR3-201ENST00000248121 SEMA6BQ9H3T3 888 aa26.01■■□□□ 1.75
SYNGR3-201ENST00000248121 IDEP14735 1019 aa26■■□□□ 1.75
SYNGR3-201ENST00000248121 KCNJ6P48051 423 aa26■■□□□ 1.75
SYNGR3-201ENST00000248121 ADKP55263 362 aaKnown RBP26■■□□□ 1.75
SYNGR3-201ENST00000248121 SNAPC2Q13487 334 aa26■■□□□ 1.75
SYNGR3-201ENST00000248121 CEP55Q53EZ4 464 aa26■■□□□ 1.75
SYNGR3-201ENST00000248121 HAUS3Q68CZ6 603 aa26■■□□□ 1.75
SYNGR3-201ENST00000248121 MS4A4AQ96JQ5 239 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms