RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 A0A1B0GUL7 405 aa9.15□□□□□ -0.94
CXCR4-201ENST00000241393 SLC22A31A6NKX4 558 aa9.15□□□□□ -0.94
CXCR4-201ENST00000241393 SMAD7O15105 426 aaKnown RBP9.15□□□□□ -0.94
CXCR4-201ENST00000241393 RNF113AO15541 343 aaKnown RBP9.15□□□□□ -0.94
CXCR4-201ENST00000241393 DHX15O43143 795 aaKnown RBP9.15□□□□□ -0.94
CXCR4-201ENST00000241393 CAVIN2O95810 425 aa9.15□□□□□ -0.94
CXCR4-201ENST00000241393 A1BGP04217 495 aa9.15□□□□□ -0.94
CXCR4-201ENST00000241393 PCCAP05165 728 aaPredicted RBP9.15□□□□□ -0.94
CXCR4-201ENST00000241393 PTMAP06454 111 aaKnown RBP9.15□□□□□ -0.94
CXCR4-201ENST00000241393 IFIT1P09914 478 aaKnown RBP9.15□□□□□ -0.94
CXCR4-201ENST00000241393 GUCY2CP25092 1073 aa9.15□□□□□ -0.94
CXCR4-201ENST00000241393 ETFBP38117 255 aa9.15□□□□□ -0.94
CXCR4-201ENST00000241393 EXOSC10Q01780 885 aaKnown RBP9.15□□□□□ -0.94
CXCR4-201ENST00000241393 RESTQ13127 1097 aa9.15□□□□□ -0.94
CXCR4-201ENST00000241393 CDCP2Q5VXM1 449 aa9.15□□□□□ -0.94
CXCR4-201ENST00000241393 PAOXQ6QHF9 649 aa9.15□□□□□ -0.94
CXCR4-201ENST00000241393 RBM43Q6ZSC3 357 aaKnown RBP9.15□□□□□ -0.94
CXCR4-201ENST00000241393 Q6ZUG5 572 aa9.15□□□□□ -0.94
CXCR4-201ENST00000241393 SLFN12Q8IYM2 578 aa9.15□□□□□ -0.94
CXCR4-201ENST00000241393 ISL2Q96A47 359 aa9.15□□□□□ -0.94
CXCR4-201ENST00000241393 DHRS1Q96LJ7 313 aa9.15□□□□□ -0.94
CXCR4-201ENST00000241393 NUP62CLQ9H1M0 184 aa9.15□□□□□ -0.94
CXCR4-201ENST00000241393 CFAP45Q9UL16 551 aa9.15□□□□□ -0.94
CXCR4-201ENST00000241393 GOLGA6L4A6NEF3 574 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 GOLIM4O00461 696 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 EVCP57679 992 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 PPP2R5EQ16537 467 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 FXNQ16595 210 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 CCDC57Q2TAC2 916 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 OVOS1Q6IE37 1185 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 PHACTR4Q8IZ21 702 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 MFSD2AQ8NA29 543 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 LEO1Q8WVC0 666 aaPredicted RBP9.14□□□□□ -0.95
CXCR4-201ENST00000241393 ZNF274Q96GC6 653 aaPredicted RBP9.14□□□□□ -0.95
CXCR4-201ENST00000241393 MYRFLQ96LU7 910 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 TCEANC2Q96MN5 208 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 NEUROD6Q96NK8 337 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 FOXQ1Q9C009 403 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 ACSS3Q9H6R3 686 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 CNNM2Q9H8M5 875 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 FAM105AQ9NUU6 356 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 USP25Q9UHP3 1055 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 CTNNA3Q9UI47 895 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 CDHR2Q9BYE9 1310 aa9.14□□□□□ -0.95
CXCR4-201ENST00000241393 LRIG2O94898 1065 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 CST3P01034 146 aaPredicted RBP9.13□□□□□ -0.95
CXCR4-201ENST00000241393 CSF1RP07333 972 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 HSPD1P10809 573 aaKnown RBP9.13□□□□□ -0.95
CXCR4-201ENST00000241393 HSPA2P54652 639 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 KIAA2012Q0VF49 1180 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 HSP90AB3PQ58FF7 597 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 CCDC158Q5M9N0 1113 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 GIMAP6Q6P9H5 292 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 CCDC129Q6ZRS4 1044 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 ZBTB38Q8NAP3 1195 aaPredicted RBP9.13□□□□□ -0.95
CXCR4-201ENST00000241393 ACSF2Q96CM8 615 aaPredicted RBP9.13□□□□□ -0.95
CXCR4-201ENST00000241393 ATG4CQ96DT6 458 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 SEC62Q99442 399 aaKnown RBP9.13□□□□□ -0.95
CXCR4-201ENST00000241393 TMOD3Q9NYL9 352 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 TJP2Q9UDY2 1190 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 MAST3O60307 1309 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 H3BQV1 296 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 RRP9O43818 475 aaKnown RBP9.13□□□□□ -0.95
CXCR4-201ENST00000241393 ADCY5O95622 1261 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 STARD3NLO95772 234 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 HSP90B1P14625 803 aaKnown RBP9.13□□□□□ -0.95
CXCR4-201ENST00000241393 NME1P15531 152 aaKnown RBP9.13□□□□□ -0.95
CXCR4-201ENST00000241393 TIMM10P62072 90 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 SCRN1Q12765 414 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 LRRC24Q50LG9 513 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 ARSHQ5FYA8 562 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 KIF6Q6ZMV9 814 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 STOX1Q6ZVD7 989 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 FERMT3Q86UX7 667 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 NSUN7Q8NE18 718 aaKnown RBP9.13□□□□□ -0.95
CXCR4-201ENST00000241393 BRF1Q92994 677 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 ZNF512BQ96KM6 892 aaPredicted RBP9.13□□□□□ -0.95
CXCR4-201ENST00000241393 CCDC74BQ96LY2 380 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 OSBPL2Q9H1P3 480 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 CLSTN2Q9H4D0 955 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 DAGLAQ9Y4D2 1042 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 WDR19Q8NEZ3 1342 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 LRP6O75581 1613 aa9.13□□□□□ -0.95
CXCR4-201ENST00000241393 TOGARAM1Q9Y4F4 1720 aa9.12□□□□□ -0.95
CXCR4-201ENST00000241393 NHSL1Q5SYE7 1610 aa9.12□□□□□ -0.95
CXCR4-201ENST00000241393 SALL1Q9NSC2 1324 aa9.12□□□□□ -0.95
CXCR4-201ENST00000241393 GOLGA6L6A8MZA4 724 aa9.12□□□□□ -0.95
CXCR4-201ENST00000241393 E7EWF7 191 aa9.12□□□□□ -0.95
CXCR4-201ENST00000241393 TNFRSF10CO14798 259 aa9.12□□□□□ -0.95
CXCR4-201ENST00000241393 JAK2O60674 1132 aa9.12□□□□□ -0.95
CXCR4-201ENST00000241393 BMP3P12645 472 aa9.12□□□□□ -0.95
CXCR4-201ENST00000241393 STK3Q13188 491 aa9.12□□□□□ -0.95
CXCR4-201ENST00000241393 RAB33AQ14088 237 aa9.12□□□□□ -0.95
CXCR4-201ENST00000241393 BBS9Q3SYG4 887 aa9.12□□□□□ -0.95
CXCR4-201ENST00000241393 ZNF746Q6NUN9 644 aaPredicted RBP9.12□□□□□ -0.95
CXCR4-201ENST00000241393 DPH6Q7L8W6 267 aa9.12□□□□□ -0.95
CXCR4-201ENST00000241393 PIBF1Q8WXW3 757 aa9.12□□□□□ -0.95
CXCR4-201ENST00000241393 EZH1Q92800 747 aaPredicted RBP9.12□□□□□ -0.95
CXCR4-201ENST00000241393 MKL1Q969V6 931 aa9.12□□□□□ -0.95
CXCR4-201ENST00000241393 TNMDQ9H2S6 317 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms