RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 TNFRSF8P28908 595 aa22.81■■□□□ 1.24
SNX3-201ENST00000230085 CDC25AP30304 524 aa22.81■■□□□ 1.24
SNX3-201ENST00000230085 TNNT3P45378 269 aaPredicted RBP22.81■■□□□ 1.24
SNX3-201ENST00000230085 ZNF157P51786 506 aaPredicted RBP22.81■■□□□ 1.24
SNX3-201ENST00000230085 ZNF174Q15697 407 aa22.81■■□□□ 1.24
SNX3-201ENST00000230085 DNAJC21Q5F1R6 531 aaKnown RBP22.81■■□□□ 1.24
SNX3-201ENST00000230085 FAM47AQ5JRC9 791 aa22.81■■□□□ 1.24
SNX3-201ENST00000230085 IQCA1Q86XH1 822 aa22.81■■□□□ 1.24
SNX3-201ENST00000230085 AENQ8WTP8 325 aaKnown RBP22.81■■□□□ 1.24
SNX3-201ENST00000230085 DHTKD1Q96HY7 919 aaPredicted RBP22.81■■□□□ 1.24
SNX3-201ENST00000230085 GUCA1BQ9UMX6 200 aa22.81■■□□□ 1.24
SNX3-201ENST00000230085 V9GY48 417 aaPredicted RBP22.81■■□□□ 1.24
SNX3-201ENST00000230085 ATXN2Q99700 1313 aaKnown RBP22.8■■□□□ 1.24
SNX3-201ENST00000230085 ATP1A1P05023 1023 aaKnown RBP22.8■■□□□ 1.24
SNX3-201ENST00000230085 PTPRAP18433 802 aa22.8■■□□□ 1.24
SNX3-201ENST00000230085 HOXA7P31268 230 aaPredicted RBP22.8■■□□□ 1.24
SNX3-201ENST00000230085 ZBED6P86452 979 aa22.8■■□□□ 1.24
SNX3-201ENST00000230085 IL17AQ16552 155 aa22.8■■□□□ 1.24
SNX3-201ENST00000230085 CCDC122Q5T0U0 273 aa22.8■■□□□ 1.24
SNX3-201ENST00000230085 IFIT1BQ5T764 474 aaKnown RBP22.8■■□□□ 1.24
SNX3-201ENST00000230085 RGMBQ6NW40 437 aa22.8■■□□□ 1.24
SNX3-201ENST00000230085 CCDC82Q8N4S0 544 aa22.8■■□□□ 1.24
SNX3-201ENST00000230085 CCDC17Q96LX7 622 aa22.8■■□□□ 1.24
SNX3-201ENST00000230085 CCSER1Q9C0I3 900 aa22.8■■□□□ 1.24
SNX3-201ENST00000230085 PICK1Q9NRD5 415 aa22.8■■□□□ 1.24
SNX3-201ENST00000230085 FAM184BQ9ULE4 1060 aa22.8■■□□□ 1.24
SNX3-201ENST00000230085 ZBTB21Q9ULJ3 1066 aa22.8■■□□□ 1.24
SNX3-201ENST00000230085 DOCK1Q14185 1865 aa22.8■■□□□ 1.24
SNX3-201ENST00000230085 ASNSP08243 561 aa22.79■■□□□ 1.24
SNX3-201ENST00000230085 EPB41P11171 864 aaKnown RBP22.79■■□□□ 1.24
SNX3-201ENST00000230085 PFKFB3Q16875 520 aaPredicted RBP22.79■■□□□ 1.24
SNX3-201ENST00000230085 DEFB115Q30KQ5 88 aa22.79■■□□□ 1.24
SNX3-201ENST00000230085 GIMAP8Q8ND71 665 aaPredicted RBP22.79■■□□□ 1.24
SNX3-201ENST00000230085 JAKMIP2Q96AA8 810 aa22.79■■□□□ 1.24
SNX3-201ENST00000230085 SH3GL2Q99962 352 aa22.79■■□□□ 1.24
SNX3-201ENST00000230085 PLEKHA8P1O95397 391 aa22.78■■□□□ 1.24
SNX3-201ENST00000230085 SCG2P13521 617 aa22.78■■□□□ 1.24
SNX3-201ENST00000230085 TFAP4Q01664 338 aa22.78■■□□□ 1.24
SNX3-201ENST00000230085 SEPT2Q15019 361 aa22.78■■□□□ 1.24
SNX3-201ENST00000230085 TTC31Q49AM3 519 aaPredicted RBP22.78■■□□□ 1.24
SNX3-201ENST00000230085 TTI2Q6NXR4 508 aa22.78■■□□□ 1.24
SNX3-201ENST00000230085 OPTNQ96CV9 577 aa22.78■■□□□ 1.24
SNX3-201ENST00000230085 HHIPL1Q96JK4 782 aa22.78■■□□□ 1.24
SNX3-201ENST00000230085 DISC1Q9NRI5 854 aa22.78■■□□□ 1.24
SNX3-201ENST00000230085 KBTBD4Q9NVX7 518 aa22.78■■□□□ 1.24
SNX3-201ENST00000230085 ZNHIT6Q9NWK9 470 aaKnown RBP22.78■■□□□ 1.24
SNX3-201ENST00000230085 A0A087WUV0 522 aaPredicted RBP22.78■■□□□ 1.24
SNX3-201ENST00000230085 RASSF10A6NK89 507 aa22.78■■□□□ 1.24
SNX3-201ENST00000230085 LAD1O00515 517 aa22.78■■□□□ 1.24
SNX3-201ENST00000230085 CCDC70Q6NSX1 233 aa22.78■■□□□ 1.24
SNX3-201ENST00000230085 FOXR1Q6PIV2 292 aa22.78■■□□□ 1.24
SNX3-201ENST00000230085 PAXIP1Q6ZW49 1069 aaPredicted RBP22.78■■□□□ 1.24
SNX3-201ENST00000230085 SUGP1Q8IWZ8 645 aaKnown RBP22.78■■□□□ 1.24
SNX3-201ENST00000230085 OTUD5Q96G74 571 aa22.78■■□□□ 1.24
SNX3-201ENST00000230085 ERGIC2Q96RQ1 377 aa22.78■■□□□ 1.24
SNX3-201ENST00000230085 ZHX2Q9Y6X8 837 aa22.78■■□□□ 1.24
SNX3-201ENST00000230085 TSPY2A6NKD2 308 aa22.77■■□□□ 1.24
SNX3-201ENST00000230085 VGLL3A8MV65 326 aa22.77■■□□□ 1.24
SNX3-201ENST00000230085 AGPSO00116 658 aa22.77■■□□□ 1.24
SNX3-201ENST00000230085 PSMA7O14818 248 aa22.77■■□□□ 1.24
SNX3-201ENST00000230085 KLRC4O43908 158 aa22.77■■□□□ 1.24
SNX3-201ENST00000230085 LCA5LO95447 670 aa22.77■■□□□ 1.24
SNX3-201ENST00000230085 TSPY3P0CV98 308 aa22.77■■□□□ 1.24
SNX3-201ENST00000230085 TSPY8P0CW00 308 aa22.77■■□□□ 1.24
SNX3-201ENST00000230085 MKRN3Q13064 507 aaKnown RBP22.77■■□□□ 1.24
SNX3-201ENST00000230085 GRM1Q13255 1194 aa22.77■■□□□ 1.24
SNX3-201ENST00000230085 ICE2Q659A1 982 aa22.77■■□□□ 1.24
SNX3-201ENST00000230085 CYP4F22Q6NT55 531 aa22.77■■□□□ 1.24
SNX3-201ENST00000230085 TMEM179Q6ZVK1 233 aa22.77■■□□□ 1.24
SNX3-201ENST00000230085 ERO1BQ86YB8 467 aa22.77■■□□□ 1.24
SNX3-201ENST00000230085 CRACR2AQ9BSW2 395 aa22.77■■□□□ 1.24
SNX3-201ENST00000230085 BLZF1Q9H2G9 400 aa22.77■■□□□ 1.24
SNX3-201ENST00000230085 SPDYE5A6NIY4 337 aa22.76■■□□□ 1.23
SNX3-201ENST00000230085 GJA5P36382 358 aa22.76■■□□□ 1.23
SNX3-201ENST00000230085 PRPHP41219 470 aa22.76■■□□□ 1.23
SNX3-201ENST00000230085 VAV2P52735 878 aa22.76■■□□□ 1.23
SNX3-201ENST00000230085 CLEC10AQ8IUN9 316 aa22.76■■□□□ 1.23
SNX3-201ENST00000230085 FAM114A1Q8IWE2 563 aa22.76■■□□□ 1.23
SNX3-201ENST00000230085 SELENOOQ9BVL4 669 aa22.76■■□□□ 1.23
SNX3-201ENST00000230085 JRKLQ9Y4A0 524 aa22.76■■□□□ 1.23
SNX3-201ENST00000230085 USP17L5A8MUK1 530 aa22.76■■□□□ 1.23
SNX3-201ENST00000230085 IPO7O95373 1038 aaKnown RBP22.76■■□□□ 1.23
SNX3-201ENST00000230085 PPFIA1Q13136 1202 aa22.76■■□□□ 1.23
SNX3-201ENST00000230085 NAALADL2Q58DX5 795 aa22.76■■□□□ 1.23
SNX3-201ENST00000230085 GALNT17Q6IS24 598 aa22.76■■□□□ 1.23
SNX3-201ENST00000230085 RASAL3Q86YV0 1011 aa22.76■■□□□ 1.23
SNX3-201ENST00000230085 DAGLBQ8NCG7 672 aa22.76■■□□□ 1.23
SNX3-201ENST00000230085 TRIM58Q8NG06 486 aa22.76■■□□□ 1.23
SNX3-201ENST00000230085 FAM76AQ8TAV0 307 aa22.76■■□□□ 1.23
SNX3-201ENST00000230085 EXOC1Q9NV70 894 aa22.76■■□□□ 1.23
SNX3-201ENST00000230085 ABCB11O95342 1321 aa22.75■■□□□ 1.23
SNX3-201ENST00000230085 BICDL2A1A5D9 508 aa22.75■■□□□ 1.23
SNX3-201ENST00000230085 GOLGA8KD6RF30 607 aa22.75■■□□□ 1.23
SNX3-201ENST00000230085 IRF6O14896 467 aa22.75■■□□□ 1.23
SNX3-201ENST00000230085 NMT2O60551 498 aa22.75■■□□□ 1.23
SNX3-201ENST00000230085 STAT6P42226 847 aa22.75■■□□□ 1.23
SNX3-201ENST00000230085 PPATQ06203 517 aa22.75■■□□□ 1.23
SNX3-201ENST00000230085 NNTQ13423 1086 aa22.75■■□□□ 1.23
SNX3-201ENST00000230085 FOXR2Q6PJQ5 311 aa22.75■■□□□ 1.23
SNX3-201ENST00000230085 CCDC155Q8N6L0 562 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms