RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 RDXP35241 583 aaKnown RBP15.38■□□□□ 0.05
SCNN1A-201ENST00000228916 BIRC3Q13489 604 aa15.38■□□□□ 0.05
SCNN1A-201ENST00000228916 NONOQ15233 471 aaKnown RBP eCLIP15.38■□□□□ 0.05
SCNN1A-201ENST00000228916 OSBPL7Q9BZF2 842 aa15.38■□□□□ 0.05
SCNN1A-201ENST00000228916 PACSIN2Q9UNF0 486 aaPredicted RBP15.38■□□□□ 0.05
SCNN1A-201ENST00000228916 C5orf60A6NFR6 353 aa15.38■□□□□ 0.05
SCNN1A-201ENST00000228916 ZNF844Q08AG5 666 aa15.38■□□□□ 0.05
SCNN1A-201ENST00000228916 NEK8Q86SG6 692 aa15.38■□□□□ 0.05
SCNN1A-201ENST00000228916 PROM2Q8N271 834 aa15.38■□□□□ 0.05
SCNN1A-201ENST00000228916 RIC8AQ9NPQ8 531 aa15.38■□□□□ 0.05
SCNN1A-201ENST00000228916 KIF1CO43896 1103 aaKnown RBP15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 PAEPP09466 180 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 SCFD2Q8WU76 684 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 CELF1Q92879 486 aaKnown RBP15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 LRRC45Q96CN5 670 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 PNMA5Q96PV4 448 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 PALM3A6NDB9 673 aaPredicted RBP15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 USP17L8P0C7I0 530 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 ORC2Q13416 577 aaPredicted RBP15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 ZCWPW2Q504Y3 356 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 KLHL7Q8IXQ5 586 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 TBC1D5Q92609 795 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 LARP4BQ92615 738 aaKnown RBP15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 JAG2Q9Y219 1238 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 CEP83Q9Y592 693 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 A0A087X0T9 212 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 GOLGA6L7A0A1B0GV03 622 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 BTNL10A8MVZ5 291 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 FAM228BP0C875 321 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 RNASE9P60153 205 aaKnown RBP15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 HLTFQ14527 1009 aaKnown RBP eCLIP15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 KIAA0753Q2KHM9 967 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 RUFY4Q6ZNE9 571 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 FBXO33Q7Z6M2 555 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 ACSBG1Q96GR2 724 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 CCDC114Q96M63 670 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 TANGO6Q9C0B7 1094 aa15.37■□□□□ 0.05
SCNN1A-201ENST00000228916 LOC102724428A0A0B4J2F2 783 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 DNM1LO00429 736 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 ERCC3P19447 782 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 SIK1P57059 783 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 QPCTQ16769 361 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 SPRED3Q2MJR0 410 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 ANKRD20A8PQ5CZ79 823 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 DYMQ7RTS9 669 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 FUKQ8N0W3 1084 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 MAGEC3Q8TD91 643 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 TSG101Q99816 390 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 MCM9Q9NXL9 1143 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 COL4A3BPQ9Y5P4 624 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 CDR1P51861 262 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 PSMD2Q13200 908 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 AGBL2Q5U5Z8 902 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 CYB5D1Q6P9G0 228 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 OR2W6PQ8NHA6 318 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 GIMAP7Q8NHV1 300 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 PACSIN1Q9BY11 444 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 TFCP2L1Q9NZI6 479 aa15.36■□□□□ 0.05
SCNN1A-201ENST00000228916 POLR2FP61218 127 aaKnown RBP15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 BYSLQ13895 437 aaKnown RBP15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 LACTB2Q53H82 288 aaPredicted RBP15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 GLIS3Q8NEA6 775 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 ACTRT1Q8TDG2 376 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 SGSM3Q96HU1 749 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 CALR3Q96L12 384 aaKnown RBP15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 MTMR9Q96QG7 549 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 LZTS2Q9BRK4 669 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 LSM14BQ9BX40 385 aaKnown RBP15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 AIPL1Q9NZN9 384 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 MTMR7Q9Y216 660 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 LEMD3Q9Y2U8 911 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 CCDC88AQ3V6T2 1871 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 ELF1P32519 619 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 CTNNA1P35221 906 aaKnown RBP15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 USP11P51784 963 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 NAPAP54920 295 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 FKBP3Q00688 224 aaKnown RBP15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 RPS6KA1Q15418 735 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 ARMC9Q7Z3E5 817 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 PARP9Q8IXQ6 854 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 TAF4BQ92750 862 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 DYNLL2Q96FJ2 89 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 SEC16BQ96JE7 1060 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 SPZ1Q9BXG8 430 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 CENPHQ9H3R5 247 aa15.35■□□□□ 0.05
SCNN1A-201ENST00000228916 USP17L3A6NCW0 530 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 USP17L4A6NCW7 530 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 KCNK3O14649 394 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 KIF4AO95239 1232 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 FXR2P51116 673 aaKnown RBP eCLIP15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 PPP2R2AP63151 447 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 SF3B3Q15393 1217 aaKnown RBP15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 SNCBQ16143 134 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 C12orf60Q5U649 245 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 USP17L1Q7RTZ2 530 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 FAM228AQ86W67 206 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 CCDC50Q8IVM0 306 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 PBKQ96KB5 322 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 NEUROG2Q9H2A3 272 aa15.34■□□□□ 0.05
SCNN1A-201ENST00000228916 SUFUQ9UMX1 484 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms