RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 TESK2Q96S53 571 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 INSRP06213 1382 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 SASH1O94885 1247 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 ESRRBO95718 433 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 GH2P01242 217 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 AFPP02771 609 aaKnown RBP11.42□□□□□ -0.58
TRPS1-201ENST00000220888 ZNF75DP51815 510 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 JAK3P52333 1124 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 THNSL1Q8IYQ7 743 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 SYNE4Q8N205 404 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 SYMPKQ92797 1274 aaKnown RBP11.42□□□□□ -0.58
TRPS1-201ENST00000220888 MMP19Q99542 508 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 NUP153P49790 1475 aaKnown RBP11.42□□□□□ -0.58
TRPS1-201ENST00000220888 A0A0D9SFI3 127 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 GSTA4O15217 222 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 PGBD3Q8N328 593 aa11.42□□□□□ -0.58
TRPS1-201ENST00000220888 MEIS1O00470 390 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 ZNF853P0CG23 659 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 FCER1AP12319 257 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 GUCY2FP51841 1108 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 RAD51Q06609 339 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 ALCAMQ13740 583 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 ACCSLQ4AC99 568 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 SNRNP48Q6IEG0 339 aaKnown RBP11.41□□□□□ -0.58
TRPS1-201ENST00000220888 PARVGQ9HBI0 331 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 SART1O43290 800 aaKnown RBP11.41□□□□□ -0.58
TRPS1-201ENST00000220888 BUB1BO60566 1050 aaPredicted RBP11.41□□□□□ -0.58
TRPS1-201ENST00000220888 PFKFB2O60825 505 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 LDHAP00338 332 aaKnown RBP11.41□□□□□ -0.58
TRPS1-201ENST00000220888 COPB2P35606 906 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 SF3A3Q12874 501 aaKnown RBP eCLIP11.41□□□□□ -0.58
TRPS1-201ENST00000220888 ZNF667Q5HYK9 610 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 KIAA1755Q5JYT7 1200 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 BZW1Q7L1Q6 419 aaKnown RBP11.41□□□□□ -0.58
TRPS1-201ENST00000220888 DHX38Q92620 1227 aaKnown RBP11.41□□□□□ -0.58
TRPS1-201ENST00000220888 SMIM24O75264 130 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 CHEK2O96017 543 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 CRKP46108 304 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 ZNF467Q7Z7K2 595 aaPredicted RBP11.41□□□□□ -0.58
TRPS1-201ENST00000220888 AFG1LQ8WV93 481 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 GPR108Q9NPR9 543 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 USP17L2Q6R6M4 530 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 SSH3Q8TE77 659 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 PDCD6IPQ8WUM4 868 aaKnown RBP11.41□□□□□ -0.58
TRPS1-201ENST00000220888 RNF26Q9BY78 433 aaPredicted RBP11.41□□□□□ -0.58
TRPS1-201ENST00000220888 STRIP2Q9ULQ0 834 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 ORC6Q9Y5N6 252 aa11.41□□□□□ -0.58
TRPS1-201ENST00000220888 ECE2O60344 883 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 CPB1P15086 417 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 DDIT3P35638 169 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 MXI1P50539 228 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 TAF1CQ15572 869 aaPredicted RBP11.4□□□□□ -0.58
TRPS1-201ENST00000220888 CCDC38Q502W7 563 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 HP1BP3Q5SSJ5 553 aaPredicted RBP11.4□□□□□ -0.58
TRPS1-201ENST00000220888 PHLDB3Q6NSJ2 640 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 BEST2Q8NFU1 509 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 USP17L10C9JJH3 530 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 CLIC2O15247 247 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 DYNLT1P63172 113 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 MAPK6Q16659 721 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 SPOPLQ6IQ16 392 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 RASGRP4Q8TDF6 673 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 RMDN3Q96TC7 470 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 USP44Q9H0E7 712 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 ZNF335Q9H4Z2 1342 aaPredicted RBP11.4□□□□□ -0.58
TRPS1-201ENST00000220888 ZFYVE16Q7Z3T8 1539 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 HOXA13P31271 388 aaPredicted RBP11.4□□□□□ -0.58
TRPS1-201ENST00000220888 ADKP55263 362 aaKnown RBP11.4□□□□□ -0.58
TRPS1-201ENST00000220888 CACNB1Q02641 598 aaPredicted RBP11.4□□□□□ -0.58
TRPS1-201ENST00000220888 TTC31Q49AM3 519 aaPredicted RBP11.4□□□□□ -0.58
TRPS1-201ENST00000220888 SZRD1Q7Z422 152 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 SPDL1Q96EA4 605 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 DDX27Q96GQ7 796 aaKnown RBP11.4□□□□□ -0.58
TRPS1-201ENST00000220888 VPS39Q96JC1 886 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 COPRSQ9NQ92 184 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.4□□□□□ -0.58
TRPS1-201ENST00000220888 FAM95CA0A1B0GW59 222 aa11.4□□□□□ -0.58
TRPS1-201ENST00000220888 RNF10Q8N5U6 811 aaKnown RBP11.4□□□□□ -0.58
TRPS1-201ENST00000220888 CCDC124Q96CT7 223 aaKnown RBP11.4□□□□□ -0.58
TRPS1-201ENST00000220888 POC1B-GALNT4F8VUJ3 575 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 HSPA6P17066 643 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 KLC3Q6P597 504 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 ANGPTL8Q6UXH0 198 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 PODNQ7Z5L7 613 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 NLRP10Q86W26 655 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 NSUN6Q8TEA1 469 aaKnown RBP11.39□□□□□ -0.59
TRPS1-201ENST00000220888 CNOT6LQ96LI5 555 aaKnown RBP11.39□□□□□ -0.59
TRPS1-201ENST00000220888 FEM1BQ9UK73 627 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 TRIM35Q9UPQ4 493 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 SUGT1Q9Y2Z0 365 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 PNMA6FA0A0J9YX94 578 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 LRRN2O75325 713 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 MOCS3O95396 460 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 TCP1P17987 556 aaKnown RBP11.39□□□□□ -0.59
TRPS1-201ENST00000220888 ZNF157P51786 506 aaPredicted RBP11.39□□□□□ -0.59
TRPS1-201ENST00000220888 GTF2A1P52655 376 aaPredicted RBP11.39□□□□□ -0.59
TRPS1-201ENST00000220888 CLEC4GQ6UXB4 293 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 KRBA2Q6ZNG9 492 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 ARHGEF25Q86VW2 580 aa11.39□□□□□ -0.59
TRPS1-201ENST00000220888 ASIC4Q96FT7 647 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms