RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 DSG3P32926 999 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 OAZ1P54368 228 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 PSMC6P62333 389 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 ARSHQ5FYA8 562 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 NIPA1Q7RTP0 329 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 GPBP1Q86WP2 473 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 CSGALNACT2Q8N6G5 542 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 SYT2Q8N9I0 419 aaPredicted RBP20.71■□□□□ 0.91
CTSA-201ENST00000191018 DNM3Q9UQ16 869 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 ITIH6Q6UXX5 1313 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 NRDCO43847 1150 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 SSBP05455 408 aaKnown RBP eCLIP20.71■□□□□ 0.91
CTSA-201ENST00000191018 ITGB5P18084 799 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 RPS6P62753 249 aaKnown RBP20.71■□□□□ 0.91
CTSA-201ENST00000191018 SH3D19Q5HYK7 790 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 C9orf131Q5VYM1 1079 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 FOXR2Q6PJQ5 311 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 CATSPERGQ6ZRH7 1159 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.71■□□□□ 0.91
CTSA-201ENST00000191018 KRT26Q7Z3Y9 468 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 TC2NQ8N9U0 490 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 TUFT1Q9NNX1 390 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 PANK4Q9NVE7 773 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 CTDP1Q9Y5B0 961 aaPredicted RBP20.71■□□□□ 0.91
CTSA-201ENST00000191018 N4BP3O15049 544 aa20.7■□□□□ 0.9
CTSA-201ENST00000191018 PCNX4Q63HM2 1172 aa20.7■□□□□ 0.9
CTSA-201ENST00000191018 TMEM139Q8IV31 216 aa20.7■□□□□ 0.9
CTSA-201ENST00000191018 IL31RAQ8NI17 732 aa20.7■□□□□ 0.9
CTSA-201ENST00000191018 DCPSQ96C86 337 aaKnown RBP20.7■□□□□ 0.9
CTSA-201ENST00000191018 TRERF1Q96PN7 1200 aa20.7■□□□□ 0.9
CTSA-201ENST00000191018 ZNF577Q9BSK1 485 aa20.7■□□□□ 0.9
CTSA-201ENST00000191018 WDR11Q9BZH6 1224 aa20.7■□□□□ 0.9
CTSA-201ENST00000191018 VPS16Q9H269 839 aa20.7■□□□□ 0.9
CTSA-201ENST00000191018 HOMER2Q9NSB8 354 aa20.7■□□□□ 0.9
CTSA-201ENST00000191018 TAB2Q9NYJ8 693 aa20.7■□□□□ 0.9
CTSA-201ENST00000191018 PCDHA2Q9Y5H9 948 aa20.7■□□□□ 0.9
CTSA-201ENST00000191018 SNCAIPQ9Y6H5 919 aa20.7■□□□□ 0.9
CTSA-201ENST00000191018 GAS7O60861 476 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 COG2Q14746 738 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 SLC30A10Q6XR72 485 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 CCDC65Q8IXS2 484 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 ZFP91Q96JP5 570 aaPredicted RBP20.69■□□□□ 0.9
CTSA-201ENST00000191018 RIT2Q99578 217 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 ZNF214Q9UL59 606 aaPredicted RBP20.69■□□□□ 0.9
CTSA-201ENST00000191018 UBIAD1Q9Y5Z9 338 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 LOC285556D6RIA3 1793 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 ATP2A1O14983 1001 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 SLITRK3O94933 977 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 MUTP22033 750 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 MAP3K9P80192 1104 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 CYP4A11Q02928 519 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 GOLGA8FQ08AF8 430 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 GOLGA8DPQ0D2H9 430 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 PRKG1Q13976 671 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 VGLL4Q14135 290 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 FAM26FQ5R3K3 315 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 TAAR1Q96RJ0 339 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 RGL1Q9NZL6 768 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 TMOD4Q9NZQ9 345 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 RIPK3Q9Y572 518 aa20.69■□□□□ 0.9
CTSA-201ENST00000191018 LOXHD1Q8IVV2 1947 aa20.68■□□□□ 0.9
CTSA-201ENST00000191018 ADM5C9JUS6 153 aa20.68■□□□□ 0.9
CTSA-201ENST00000191018 IPO5O00410 1097 aaKnown RBP20.68■□□□□ 0.9
CTSA-201ENST00000191018 EYA4O95677 639 aa20.68■□□□□ 0.9
CTSA-201ENST00000191018 MRPS9P82933 396 aaKnown RBP20.68■□□□□ 0.9
CTSA-201ENST00000191018 PABPC4Q13310 644 aaKnown RBP eCLIP20.68■□□□□ 0.92e-8■■□□□ 11.5
CTSA-201ENST00000191018 DNTTIP2Q5QJE6 756 aaKnown RBP20.68■□□□□ 0.9
CTSA-201ENST00000191018 DLK2Q6UY11 383 aa20.68■□□□□ 0.9
CTSA-201ENST00000191018 SULF1Q8IWU6 871 aa20.68■□□□□ 0.9
CTSA-201ENST00000191018 CCAR2Q8N163 923 aaKnown RBP20.68■□□□□ 0.9
CTSA-201ENST00000191018 GLIS3Q8NEA6 775 aa20.68■□□□□ 0.9
CTSA-201ENST00000191018 RBM46Q8TBY0 533 aaKnown RBP20.68■□□□□ 0.9
CTSA-201ENST00000191018 MYPNQ86TC9 1320 aa20.68■□□□□ 0.9
CTSA-201ENST00000191018 NPHP3-ACAD11A0A0J9YXS1 232 aa20.67■□□□□ 0.9
CTSA-201ENST00000191018 USP27XA6NNY8 438 aa20.67■□□□□ 0.9
CTSA-201ENST00000191018 LRRC63Q05C16 580 aa20.67■□□□□ 0.9
CTSA-201ENST00000191018 GIT2Q14161 759 aa20.67■□□□□ 0.9
CTSA-201ENST00000191018 E4F1Q66K89 784 aaPredicted RBP20.67■□□□□ 0.9
CTSA-201ENST00000191018 RNF207Q6ZRF8 634 aa20.67■□□□□ 0.9
CTSA-201ENST00000191018 FAM114A1Q8IWE2 563 aa20.67■□□□□ 0.9
CTSA-201ENST00000191018 L3MBTL3Q96JM7 780 aaPredicted RBP20.67■□□□□ 0.9
CTSA-201ENST00000191018 TEKT3Q9BXF9 490 aa20.67■□□□□ 0.9
CTSA-201ENST00000191018 UNC45AQ9H3U1 944 aa20.67■□□□□ 0.9
CTSA-201ENST00000191018 KCNH7Q9NS40 1196 aa20.67■□□□□ 0.9
CTSA-201ENST00000191018 RNF146Q9NTX7 359 aa20.67■□□□□ 0.9
CTSA-201ENST00000191018 MAGEC2Q9UBF1 373 aaPredicted RBP20.67■□□□□ 0.9
CTSA-201ENST00000191018 LGALS16A8MUM7 142 aa20.67■□□□□ 0.9
CTSA-201ENST00000191018 PGM5Q15124 567 aa20.67■□□□□ 0.9
CTSA-201ENST00000191018 MYOCDQ8IZQ8 938 aa20.67■□□□□ 0.9
CTSA-201ENST00000191018 ZNF507Q8TCN5 953 aa20.67■□□□□ 0.9
CTSA-201ENST00000191018 DYDC2Q96IM9 177 aa20.67■□□□□ 0.9
CTSA-201ENST00000191018 JADE2Q9NQC1 790 aa20.67■□□□□ 0.9
CTSA-201ENST00000191018 TERF1P54274 439 aa20.66■□□□□ 0.9
CTSA-201ENST00000191018 ADKP55263 362 aaKnown RBP20.66■□□□□ 0.9
CTSA-201ENST00000191018 TMEM132BQ14DG7 1078 aa20.66■□□□□ 0.9
CTSA-201ENST00000191018 EPHA7Q15375 998 aa20.66■□□□□ 0.9
CTSA-201ENST00000191018 TKFCQ3LXA3 575 aa20.66■□□□□ 0.9
CTSA-201ENST00000191018 ZCWPW2Q504Y3 356 aa20.66■□□□□ 0.9
CTSA-201ENST00000191018 PXMP2Q9NR77 195 aa20.66■□□□□ 0.9
CTSA-201ENST00000191018 R3HCC1Q9Y3T6 440 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms