RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Clrn2B2RVW2 232 aa13.54□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Heatr4E9Q357 955 aa13.54□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Kcnh2O35219 1162 aa13.54□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Grin1P35438 938 aa13.54□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Gjb4Q02738 266 aa13.54□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Miga1Q4QQM5 600 aa13.54□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Eif4enif1Q9EST3 983 aaKnown RBP13.54□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Vmn2r79E9Q067 851 aa13.54□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Map3k7clP58500 142 aa13.54□□□□□ -0.24
Sdf4-201ENSMUST00000050078 YwhagP61982 247 aaKnown RBP13.54□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Elf1Q60775 612 aa13.54□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Bnip3lQ9Z2F7 218 aa13.54□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Klhl29Q80T74 875 aa13.54□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Ccdc15Q8C9M2 810 aa13.54□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Serpinb8O08800 374 aaKnown RBP13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Lrrc6O88978 473 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 PhbP67778 272 aaKnown RBP13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Krt86P97861 486 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Esyt2Q3TZZ7 845 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Sfi1Q3UZY0 1216 aaKnown RBP13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Fam183bQ5NC57 135 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Ivns1abpQ920Q8 642 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Mms19Q9D071 1031 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 SarnpQ9D1J3 210 aaKnown RBP13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Zfyve19Q9DAZ9 389 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 EgfrQ01279 1210 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Zbtb39Q6PDK0 712 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Tlr11Q6R5P0 926 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Msantd4Q91YU3 345 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Iqsec2Q5DU25 1478 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Iqgap1Q9JKF1 1657 aaKnown RBP13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Dnaaf5B9EJR8 853 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Znf496Q5SXI5 585 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Pim2Q62070 370 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Snx14Q8BHY8 964 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Rapgef5Q8C0Q9 814 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Taco1Q8K0Z7 294 aaKnown RBP13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 MgarpQ8VI64 283 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Tktl2Q9D4D4 627 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Sgk1Q9WVC6 431 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Aldh18a1Q9Z110 795 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Ino80Q6ZPV2 1559 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Sept2P42208 361 aaKnown RBP13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 OcrlQ6NVF0 900 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Adat2Q6P6J0 191 aa13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Brd2Q7JJ13 798 aaKnown RBP13.53□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Dynlt1P51807 113 aa13.52□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Nub1P54729 614 aa13.52□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Trim43aQ3TL54 445 aa13.52□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Qrich1Q3UA37 777 aa13.52□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Atp2a3Q64518 1038 aa13.52□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Dync1li2Q6PDL0 492 aaKnown RBP13.52□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Rassf6Q80UQ2 353 aa13.52□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Tmco4Q91WU4 631 aa13.52□□□□□ -0.24
Sdf4-201ENSMUST00000050078 ArpinQ9D0A3 226 aa13.52□□□□□ -0.24
Sdf4-201ENSMUST00000050078 SpertQ32MG2 446 aa13.52□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Ppp1r13bQ62415 1087 aa13.52□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Rilpl1Q9JJC6 406 aa13.52□□□□□ -0.24
Sdf4-201ENSMUST00000050078 Cfap70D3YVL2 1141 aa13.52□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Gjb6P70689 261 aa13.52□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Apbb1ipQ8R5A3 670 aa13.52□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Trim60Q8VI40 466 aa13.52□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Tmed2Q9R0Q3 201 aa13.52□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Eddm13E9Q7F5 164 aa13.52□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Gimap9G3X987 291 aa13.52□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Stk10O55098 966 aa13.52□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Grem2O88273 168 aa13.52□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Tph1P17532 447 aa13.52□□□□□ -0.25
Sdf4-201ENSMUST00000050078 EnahQ03173 802 aa13.52□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Polr2bQ8CFI7 1174 aaKnown RBP13.52□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Gtpbp10Q8K013 366 aa13.52□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Grin3bQ91ZU9 1003 aa13.52□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Alpk1Q9CXB8 1231 aa13.52□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Hyou1Q9JKR6 999 aaKnown RBP13.52□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Mmrn1B2RPV6 1210 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Gm7995L7N2E4 160 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Pde4aO89084 844 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Slc2a13Q3UHK1 637 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Sh3gl1Q62419 368 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Spice1Q8C804 860 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Strn3Q9ERG2 796 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Ahdc1Q6PAL7 1594 aaKnown RBP13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Ess2O70279 479 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Nedd4P46935 887 aaKnown RBP13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Lrig2Q52KR2 1054 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Ercc6l2Q9JIM3 1537 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Gm45261A0A1B0GSP6 197 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Ugt1a8D3Z748 530 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Ugt1a10E9PXN7 530 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Gm4841E9QAA8 417 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Hmx1O70218 332 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Tnnc2P20801 160 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Sem1P60897 70 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Runx2Q08775 607 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Q6PD19 689 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Vps33aQ9D2N9 598 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Ca8P28651 291 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Q3TYL0 343 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Edrf1Q6GQV7 1239 aa13.51□□□□□ -0.25
Sdf4-201ENSMUST00000050078 Tlr13Q6R5N8 991 aa13.51□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms