RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 DOT1LQ8TEK3 1739 aa8.67□□□□□ -1.02
NECAP1-220ENST00000639841 M0R3H8 397 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 DNAJA2O60884 412 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 FGFR1P11362 822 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 GRIK1P39086 918 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 CDK8P49336 464 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 SLC7A5Q01650 507 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 KLF1Q13351 362 aaPredicted RBP8.66□□□□□ -1.02
NECAP1-220ENST00000639841 TAF11Q15544 211 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 CCDC92Q53HC0 331 aaPredicted RBP8.66□□□□□ -1.02
NECAP1-220ENST00000639841 SPATA5Q8NB90 893 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 ATG4CQ96DT6 458 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 HHIPQ96QV1 700 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 SUSD2Q9UGT4 822 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 CYP8B1Q9UNU6 501 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 LRRFIP2Q9Y608 721 aaKnown RBP8.66□□□□□ -1.02
NECAP1-220ENST00000639841 TUBGCP6Q96RT7 1819 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 PRODHO43272 600 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 CBFA2T2O43439 604 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 HTR3BO95264 441 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 NME1P15531 152 aaKnown RBP8.66□□□□□ -1.02
NECAP1-220ENST00000639841 SELPP16109 830 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 GRK6P43250 576 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 C4orf17Q53FE4 359 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 INTS3Q68E01 1043 aaKnown RBP8.66□□□□□ -1.02
NECAP1-220ENST00000639841 TBC1D1Q86TI0 1168 aaPredicted RBP8.66□□□□□ -1.02
NECAP1-220ENST00000639841 GCC1Q96CN9 775 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 ISCA1Q9BUE6 129 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 WDR12Q9GZL7 423 aaKnown RBP8.66□□□□□ -1.02
NECAP1-220ENST00000639841 KIAA1586Q9HCI6 787 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 NMRK2Q9NPI5 230 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 WBP1LQ9NX94 342 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 ZDHHC3Q9NYG2 299 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 NSD2O96028 1365 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 USP47Q96K76 1375 aa8.66□□□□□ -1.02
NECAP1-220ENST00000639841 ERBB4Q15303 1308 aa8.65□□□□□ -1.02
NECAP1-220ENST00000639841 PNPLA7Q6ZV29 1317 aa8.65□□□□□ -1.02
NECAP1-220ENST00000639841 MEN1O00255 615 aa8.65□□□□□ -1.02
NECAP1-220ENST00000639841 APBA1Q02410 837 aa8.65□□□□□ -1.02
NECAP1-220ENST00000639841 TYRO3Q06418 890 aa8.65□□□□□ -1.02
NECAP1-220ENST00000639841 LAMC2Q13753 1193 aa8.65□□□□□ -1.02
NECAP1-220ENST00000639841 ZNF827Q17R98 1081 aa8.65□□□□□ -1.02
NECAP1-220ENST00000639841 TTLL5Q6EMB2 1281 aa8.65□□□□□ -1.02
NECAP1-220ENST00000639841 GPR155Q7Z3F1 870 aa8.65□□□□□ -1.02
NECAP1-220ENST00000639841 OR13H1Q8NG92 308 aa8.65□□□□□ -1.02
NECAP1-220ENST00000639841 AIDAQ96BJ3 306 aa8.65□□□□□ -1.02
NECAP1-220ENST00000639841 PDGFDQ9GZP0 370 aaPredicted RBP8.65□□□□□ -1.02
NECAP1-220ENST00000639841 SMC4Q9NTJ3 1288 aa8.65□□□□□ -1.02
NECAP1-220ENST00000639841 TMEM39AQ9NV64 488 aa8.65□□□□□ -1.02
NECAP1-220ENST00000639841 TMX2Q9Y320 296 aa8.65□□□□□ -1.02
NECAP1-220ENST00000639841 SLC4A7Q9Y6M7 1214 aa8.65□□□□□ -1.02
NECAP1-220ENST00000639841 MBD4O95243 580 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 PYGLP06737 847 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 HSD3B1P14060 373 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 ADD2P35612 726 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 IL6STP40189 918 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-220ENST00000639841 SCNN1BP51168 640 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 ZNF252P-AS1Q0IIN9 211 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 ZNF267Q14586 743 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-220ENST00000639841 GNPTABQ3T906 1256 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 RPS26P11Q5JNZ5 115 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-220ENST00000639841 COL13A1Q5TAT6 717 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-220ENST00000639841 NSMFQ6X4W1 530 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 PTF1AQ7RTS3 328 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 CATIPQ7Z7H3 387 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 NXPE1Q8N323 547 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 FAM26EQ8N5C1 309 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 NKAIN3Q8N8D7 197 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 ACRBPQ8NEB7 543 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 NSUN6Q8TEA1 469 aaKnown RBP8.64□□□□□ -1.03
NECAP1-220ENST00000639841 SMARCC1Q92922 1105 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-220ENST00000639841 ACSBG1Q96GR2 724 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 CCDC138Q96M89 665 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 SH3GLB2Q9NR46 395 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 ZNF214Q9UL59 606 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-220ENST00000639841 GPC6Q9Y625 555 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-220ENST00000639841 C5P01031 1676 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 A0A096LPE4 126 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 A0A1W2PPZ6 126 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 TCRBV16S1A1N1A0A5B0 115 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 FAM205CA6NFA0 338 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 K7ENM7 598 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 EYA2O00167 538 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 DDX3YO15523 660 aaKnown RBP8.64□□□□□ -1.03
NECAP1-220ENST00000639841 CTNND1O60716 968 aaKnown RBP8.64□□□□□ -1.03
NECAP1-220ENST00000639841 IL33O95760 270 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 S1PR4O95977 384 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 GLULP15104 373 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 STT3AP46977 705 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 MPP1Q00013 466 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 INTS11Q5TA45 600 aaKnown RBP8.64□□□□□ -1.03
NECAP1-220ENST00000639841 PIK3R6Q5UE93 754 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.64□□□□□ -1.03
NECAP1-220ENST00000639841 GJD2Q9UKL4 321 aa8.64□□□□□ -1.03
NECAP1-220ENST00000639841 CICQ96RK0 1608 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-220ENST00000639841 CD163L1Q9NR16 1453 aa8.63□□□□□ -1.03
NECAP1-220ENST00000639841 TNFRSF10CO14798 259 aa8.63□□□□□ -1.03
NECAP1-220ENST00000639841 CD4P01730 458 aa8.63□□□□□ -1.03
NECAP1-220ENST00000639841 ITGAVP06756 1048 aa8.63□□□□□ -1.03
NECAP1-220ENST00000639841 FAM200BP0CF97 657 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms