RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 KLK13Q9UKR3 277 aa4.42□□□□□ -1.7
CCDC7-213ENST00000639290 MTMR7Q9Y216 660 aa4.42□□□□□ -1.7
CCDC7-213ENST00000639290 ZZEF1O43149 2961 aa4.42□□□□□ -1.7
CCDC7-213ENST00000639290 PHLPP2Q6ZVD8 1323 aa4.42□□□□□ -1.7
CCDC7-213ENST00000639290 SHROOM3Q8TF72 1996 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 SPDYE16A6NNV3 312 aaPredicted RBP4.41□□□□□ -1.7
CCDC7-213ENST00000639290 LINC00271P0C7V0 271 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 ERCC3P19447 782 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 NRIP1P48552 1158 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 SH3PXD2AQ5TCZ1 1133 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 XKR5Q6UX68 686 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 LRRC8DQ7L1W4 858 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 IL17RAQ96F46 866 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 MYD88Q99836 296 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 TLE6Q9H808 572 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 CWC25Q9NXE8 425 aaPredicted RBP4.41□□□□□ -1.7
CCDC7-213ENST00000639290 PLAGL2Q9UPG8 496 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 ZNFX1Q9P2E3 1918 aaKnown RBP4.41□□□□□ -1.7
CCDC7-213ENST00000639290 ATP5J2-PTCD1G3V325 749 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 LGR5O75473 907 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 HOXB7P09629 217 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 HOXA6P31267 233 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 GTF2F1P35269 517 aaKnown RBP eCLIP4.41□□□□□ -1.7
CCDC7-213ENST00000639290 ACVR2BQ13705 512 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 FSCN1Q16658 493 aaKnown RBP4.41□□□□□ -1.7
CCDC7-213ENST00000639290 PKDCCQ504Y2 493 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 SYCE2Q6PIF2 218 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 CYP26C1Q6V0L0 522 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 AP5M1Q9H0R1 490 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 KIAA1671Q9BY89 1806 aa4.41□□□□□ -1.7
CCDC7-213ENST00000639290 TERTO14746 1132 aaKnown RBP4.4□□□□□ -1.7
CCDC7-213ENST00000639290 SLC28A2O43868 658 aa4.4□□□□□ -1.7
CCDC7-213ENST00000639290 SPINK2P20155 84 aa4.4□□□□□ -1.7
CCDC7-213ENST00000639290 SIM2Q14190 667 aaPredicted RBP4.4□□□□□ -1.7
CCDC7-213ENST00000639290 TATDN1Q6P1N9 297 aa4.4□□□□□ -1.7
CCDC7-213ENST00000639290 CCNI2Q6ZMN8 369 aaPredicted RBP4.4□□□□□ -1.7
CCDC7-213ENST00000639290 APBB2Q92870 758 aa4.4□□□□□ -1.7
CCDC7-213ENST00000639290 DDX27Q96GQ7 796 aaKnown RBP4.4□□□□□ -1.7
CCDC7-213ENST00000639290 MYADMQ96S97 322 aa4.4□□□□□ -1.7
CCDC7-213ENST00000639290 MMP19Q99542 508 aa4.4□□□□□ -1.7
CCDC7-213ENST00000639290 LIMD1Q9UGP4 676 aa4.4□□□□□ -1.7
CCDC7-213ENST00000639290 ADGRA3Q8IWK6 1321 aa4.4□□□□□ -1.7
CCDC7-213ENST00000639290 FNDC1Q4ZHG4 1894 aaPredicted RBP4.4□□□□□ -1.7
CCDC7-213ENST00000639290 KANSL1LA0AUZ9 987 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 BLACEA4D250 179 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 FSCN2O14926 492 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 HYAL3O43820 417 aaPredicted RBP4.4□□□□□ -1.71
CCDC7-213ENST00000639290 AFPP02771 609 aaKnown RBP4.4□□□□□ -1.71
CCDC7-213ENST00000639290 TAL1P17542 331 aaPredicted RBP4.4□□□□□ -1.71
CCDC7-213ENST00000639290 NDUFV2P19404 249 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 RGS3P49796 1198 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 MFAP1P55081 439 aaKnown RBP4.4□□□□□ -1.71
CCDC7-213ENST00000639290 TCP10Q12799 353 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 NFIAQ12857 509 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 CAMK1Q14012 370 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 ZNF746Q6NUN9 644 aaPredicted RBP4.4□□□□□ -1.71
CCDC7-213ENST00000639290 DCLRE1AQ6PJP8 1040 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 CXCL17Q6UXB2 119 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 ZNF454Q8N9F8 522 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 CLUAP1Q96AJ1 413 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 KCNK17Q96T54 332 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 KIAA1683Q9H0B3 1180 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 POMKQ9H5K3 350 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 GREM2Q9H772 168 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 JADE2Q9NQC1 790 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 HSPBP1Q9NZL4 362 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 LZTS1Q9Y250 596 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 RAXQ9Y2V3 346 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 MYH13Q9UKX3 1938 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 FRYQ5TBA9 3013 aa4.4□□□□□ -1.71
CCDC7-213ENST00000639290 SCN10AQ9Y5Y9 1956 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 SNAI1O95863 264 aaPredicted RBP4.39□□□□□ -1.71
CCDC7-213ENST00000639290 ASGR2P07307 311 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 C8AP07357 584 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 DCNP07585 359 aaKnown RBP4.39□□□□□ -1.71
CCDC7-213ENST00000639290 MMP3P08254 477 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 CYP2C9P11712 490 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 TNFRSF8P28908 595 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 GPNMBQ14956 572 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 SH3BP5LQ7L8J4 393 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 GPR155Q7Z3F1 870 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 FBXO33Q7Z6M2 555 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 MORC1Q86VD1 984 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 METTL16Q86W50 562 aaKnown RBP4.39□□□□□ -1.71
CCDC7-213ENST00000639290 WDR66Q8TBY9 1149 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 SPPL3Q8TCT6 385 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 PSMG3-AS1Q96PY0 264 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 MTG1Q9BT17 334 aaPredicted RBP4.39□□□□□ -1.71
CCDC7-213ENST00000639290 RC3H2Q9HBD1 1191 aaKnown RBP4.39□□□□□ -1.71
CCDC7-213ENST00000639290 GNEQ9Y223 722 aaKnown RBP4.39□□□□□ -1.71
CCDC7-213ENST00000639290 ZMYM6O95789 1325 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 CAND2O75155 1236 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 GDF11O95390 407 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 TECP42680 631 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 PSEN2P49810 448 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 CCR3P51677 355 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 FGD1P98174 961 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 DCAF6Q58WW2 860 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 ADGRD2Q7Z7M1 963 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 RIOX2Q8IUF8 465 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms