RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 AK8Q96MA6 479 aa18.67■□□□□ 0.58
HNRNPU-217ENST00000638952 TRIM56Q9BRZ2 755 aaKnown RBP18.67■□□□□ 0.58
HNRNPU-217ENST00000638952 SLC4A7Q9Y6M7 1214 aa18.67■□□□□ 0.58
HNRNPU-217ENST00000638952 LMNB1P20700 586 aa18.67■□□□□ 0.58
HNRNPU-217ENST00000638952 PRKG1Q13976 671 aa18.67■□□□□ 0.58
HNRNPU-217ENST00000638952 CCDC68Q9H2F9 335 aa18.67■□□□□ 0.58
HNRNPU-217ENST00000638952 GOLPH3LQ9H4A5 285 aa18.67■□□□□ 0.58
HNRNPU-217ENST00000638952 ABCB6Q9NP58 842 aa18.67■□□□□ 0.58
HNRNPU-217ENST00000638952 PACSIN2Q9UNF0 486 aaPredicted RBP18.67■□□□□ 0.58
HNRNPU-217ENST00000638952 MAP3K7CLP57077 242 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 POMGNT1Q8WZA1 660 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 ZSWIM5Q9P217 1185 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 LMTK3Q96Q04 1460 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 TRIM37O94972 964 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 GARSP41250 739 aaKnown RBP18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 MAGEA9P43362 315 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 LMNB2Q03252 620 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 TOGARAM2Q6ZUX3 1019 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 FAM133AQ8N9E0 248 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 SMCR8Q8TEV9 937 aaPredicted RBP18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 RUNDC3BQ96NL0 473 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 SEC31BQ9NQW1 1179 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 GPHNQ9NQX3 736 aaPredicted RBP18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 YEATS2Q9ULM3 1422 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 ZNF804BA4D1E1 1349 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 PABPC4Q13310 644 aaKnown RBP eCLIP18.66■□□□□ 0.582e-60■■□□□ 11.7
HNRNPU-217ENST00000638952 SNX1Q13596 522 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 SCYL2Q6P3W7 929 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 CCDC124Q96CT7 223 aaKnown RBP18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 THAP9Q9H5L6 903 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 CPSF1Q10570 1443 aaKnown RBP18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 NDUFA10O95299 355 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 AFPP02771 609 aaKnown RBP18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 POLD1P28340 1107 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 CFAP74Q9C0B2 1584 aa18.66■□□□□ 0.58
HNRNPU-217ENST00000638952 ICA1Q05084 483 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 HAUS2Q9NVX0 235 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 PCDHA1Q9Y5I3 950 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 CCDC151A5D8V7 595 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 ALAS1P13196 640 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 BIRC2Q13490 618 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 SLFN13Q68D06 897 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 DCLK2Q8N568 766 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 TBCKQ8TEA7 893 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 MRPL11Q9Y3B7 192 aaKnown RBP18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 TMEM232C9JQI7 657 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 ATP2B4P23634 1241 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 EIF4A3P38919 411 aaKnown RBP18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 NNTQ13423 1086 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 DLGAP5Q15398 846 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 TUBB6Q9BUF5 446 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 PCDHA13Q9Y5I0 950 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 IFNAR1P17181 557 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 HADHQ16836 314 aaKnown RBP18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 DOK7Q18PE1 504 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 SARM1Q6SZW1 724 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 ASAP1Q9ULH1 1129 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 MYO1CO00159 1063 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 ZFXP17010 805 aaPredicted RBP18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 YWHAGP61981 247 aaKnown RBP eCLIP18.65■□□□□ 0.581e-6■■■□□ 17.8
HNRNPU-217ENST00000638952 TCP11X2Q5H9J9 407 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 RESP18Q5W5W9 173 aa18.65■□□□□ 0.58
HNRNPU-217ENST00000638952 EFCAB6Q5THR3 1501 aa18.64■□□□□ 0.58
HNRNPU-217ENST00000638952 INHBAP08476 426 aa18.64■□□□□ 0.58
HNRNPU-217ENST00000638952 P4HA1P13674 534 aa18.64■□□□□ 0.58
HNRNPU-217ENST00000638952 STX1BP61266 288 aa18.64■□□□□ 0.58
HNRNPU-217ENST00000638952 DYNC1I2Q13409 638 aaKnown RBP18.64■□□□□ 0.58
HNRNPU-217ENST00000638952 PALMDQ9NP74 551 aa18.64■□□□□ 0.58
HNRNPU-217ENST00000638952 PIH1D3Q9NQM4 214 aaKnown RBP18.64■□□□□ 0.58
HNRNPU-217ENST00000638952 PRPF3O43395 683 aaKnown RBP18.64■□□□□ 0.57
HNRNPU-217ENST00000638952 SLC7A5Q01650 507 aa18.64■□□□□ 0.57
HNRNPU-217ENST00000638952 CASP8Q14790 479 aa18.64■□□□□ 0.57
HNRNPU-217ENST00000638952 ARHGEF18Q6ZSZ5 1173 aa18.64■□□□□ 0.57
HNRNPU-217ENST00000638952 CCHCR1Q8TD31 782 aa18.64■□□□□ 0.57
HNRNPU-217ENST00000638952 USP6NLQ92738 828 aa18.64■□□□□ 0.57
HNRNPU-217ENST00000638952 SPZ1Q9BXG8 430 aa18.64■□□□□ 0.57
HNRNPU-217ENST00000638952 PNMA6AP0CW24 399 aaPredicted RBP18.64■□□□□ 0.57
HNRNPU-217ENST00000638952 BFSP1Q12934 665 aa18.64■□□□□ 0.57
HNRNPU-217ENST00000638952 KMT5BQ4FZB7 885 aa18.64■□□□□ 0.57
HNRNPU-217ENST00000638952 ODR4Q5SWX8 454 aa18.64■□□□□ 0.57
HNRNPU-217ENST00000638952 MAGOHBQ96A72 148 aaKnown RBP18.64■□□□□ 0.57
HNRNPU-217ENST00000638952 CARD10Q9BWT7 1032 aa18.64■□□□□ 0.57
HNRNPU-217ENST00000638952 ATP8A1Q9Y2Q0 1164 aa18.64■□□□□ 0.57
HNRNPU-217ENST00000638952 TMTC4Q5T4D3 741 aa18.64■□□□□ 0.57
HNRNPU-217ENST00000638952 TBC1D1Q86TI0 1168 aaPredicted RBP18.64■□□□□ 0.57
HNRNPU-217ENST00000638952 PIGSQ96S52 555 aa18.64■□□□□ 0.57
HNRNPU-217ENST00000638952 ALDH1B1P30837 517 aa18.63■□□□□ 0.57
HNRNPU-217ENST00000638952 DMP1Q13316 513 aaPredicted RBP18.63■□□□□ 0.57
HNRNPU-217ENST00000638952 KIF22Q14807 665 aa18.63■□□□□ 0.57
HNRNPU-217ENST00000638952 SLFNL1Q499Z3 407 aa18.63■□□□□ 0.57
HNRNPU-217ENST00000638952 MUM1L1Q5H9M0 696 aa18.63■□□□□ 0.57
HNRNPU-217ENST00000638952 ZNF148Q9UQR1 794 aa18.63■□□□□ 0.57
HNRNPU-217ENST00000638952 BCORL1Q5H9F3 1711 aa18.63■□□□□ 0.57
HNRNPU-217ENST00000638952 ZC3H18Q86VM9 953 aaKnown RBP18.63■□□□□ 0.57
HNRNPU-217ENST00000638952 NME8Q8N427 588 aa18.63■□□□□ 0.57
HNRNPU-217ENST00000638952 SUPT20HQ8NEM7 779 aa18.63■□□□□ 0.57
HNRNPU-217ENST00000638952 GJB4Q9NTQ9 266 aa18.63■□□□□ 0.57
HNRNPU-217ENST00000638952 MAD1L1Q9Y6D9 718 aa18.63■□□□□ 0.57
HNRNPU-217ENST00000638952 TCP10L2B9ZVM9 353 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms