RNA–Protein interactions for RNA: ENST00000638940.1

SPIN3-216, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,785 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-216ENST00000638940 TSG101Q99816 390 aa11.84□□□□□ -0.51
SPIN3-216ENST00000638940 RANBP17Q9H2T7 1088 aaKnown RBP11.84□□□□□ -0.51
SPIN3-216ENST00000638940 SLC39A2Q9NP94 309 aa11.84□□□□□ -0.51
SPIN3-216ENST00000638940 GINM1Q9NU53 330 aa11.84□□□□□ -0.51
SPIN3-216ENST00000638940 OPLAHO14841 1288 aa11.84□□□□□ -0.51
SPIN3-216ENST00000638940 RAD21O60216 631 aa11.84□□□□□ -0.51
SPIN3-216ENST00000638940 ZSCAN20P17040 1043 aaPredicted RBP11.84□□□□□ -0.51
SPIN3-216ENST00000638940 ERVK-24P63145 666 aa11.84□□□□□ -0.51
SPIN3-216ENST00000638940 MAP3K9P80192 1104 aa11.84□□□□□ -0.51
SPIN3-216ENST00000638940 COASYQ13057 564 aa11.84□□□□□ -0.51
SPIN3-216ENST00000638940 CCDC65Q8IXS2 484 aa11.84□□□□□ -0.51
SPIN3-216ENST00000638940 KIFC2Q96AC6 838 aa11.84□□□□□ -0.51
SPIN3-216ENST00000638940 VCPKMTQ9H867 229 aa11.84□□□□□ -0.51
SPIN3-216ENST00000638940 BRCA1P38398 1863 aaKnown RBP11.83□□□□□ -0.52
SPIN3-216ENST00000638940 TTC26A0AVF1 554 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 RAD17O75943 681 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 PLA2G4BP0C869 781 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 RPA1P27694 616 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 MTIF2P46199 727 aaKnown RBP11.83□□□□□ -0.52
SPIN3-216ENST00000638940 GNG11P61952 73 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 IKQ13123 557 aaPredicted RBP11.83□□□□□ -0.52
SPIN3-216ENST00000638940 MTF1Q14872 753 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 MYOCDQ8IZQ8 938 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 P2RX7Q99572 595 aaKnown RBP11.83□□□□□ -0.52
SPIN3-216ENST00000638940 MRPL44Q9H9J2 332 aaKnown RBP11.83□□□□□ -0.52
SPIN3-216ENST00000638940 ATAD5Q96QE3 1844 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 RNF225M0QZC1 329 aaPredicted RBP11.83□□□□□ -0.52
SPIN3-216ENST00000638940 ZBED6P86452 979 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 TBC1D8BQ0IIM8 1120 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 SF3B2Q13435 895 aaKnown RBP11.83□□□□□ -0.52
SPIN3-216ENST00000638940 MAN2A1Q16706 1144 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 TSR1Q2NL82 804 aaKnown RBP11.83□□□□□ -0.52
SPIN3-216ENST00000638940 ZCWPW2Q504Y3 356 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 FKBP15Q5T1M5 1219 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 DYMQ7RTS9 669 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 CEP63Q96MT8 703 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 POLR3CQ9BUI4 534 aaPredicted RBP11.83□□□□□ -0.52
SPIN3-216ENST00000638940 NOC4LQ9BVI4 516 aaKnown RBP11.83□□□□□ -0.52
SPIN3-216ENST00000638940 CCDC94Q9BW85 323 aaPredicted RBP11.83□□□□□ -0.52
SPIN3-216ENST00000638940 EHMT1Q9H9B1 1298 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 ZNF277Q9NRM2 450 aaPredicted RBP11.83□□□□□ -0.52
SPIN3-216ENST00000638940 PANK4Q9NVE7 773 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 FEM1BQ9UK73 627 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 PCDHA2Q9Y5H9 948 aa11.83□□□□□ -0.52
SPIN3-216ENST00000638940 B4DLN1 442 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 FANCGO15287 622 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 MUTP22033 750 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 CAP2P40123 477 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 SLC12A3P55017 1021 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 VWA3BQ502W6 1294 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 FAM26FQ5R3K3 315 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 LRRC55Q6ZSA7 311 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 ZC3H3Q8IXZ2 948 aaKnown RBP11.82□□□□□ -0.52
SPIN3-216ENST00000638940 DESI2Q9BSY9 194 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 EDEM3Q9BZQ6 932 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 KIAA1024Q9UPX6 916 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 CLRN2A0PK11 232 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 KIF5CO60282 957 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 GNA14O95837 355 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 CYP11B2P19099 503 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 MARSP56192 900 aaKnown RBP11.82□□□□□ -0.52
SPIN3-216ENST00000638940 KIF4BQ2VIQ3 1234 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 UTP14CQ5TAP6 766 aaKnown RBP11.82□□□□□ -0.52
SPIN3-216ENST00000638940 PPP4R3CPQ6ZMV5 832 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 ZNF397Q8NF99 534 aaPredicted RBP11.82□□□□□ -0.52
SPIN3-216ENST00000638940 MRPL11Q9Y3B7 192 aaKnown RBP11.82□□□□□ -0.52
SPIN3-216ENST00000638940 RABGAP1Q9Y3P9 1069 aa11.82□□□□□ -0.52
SPIN3-216ENST00000638940 EFCAB8A8MWE9 144 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 MED24O75448 989 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 IDEP14735 1019 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 HNRNPH3P31942 346 aaKnown RBP11.81□□□□□ -0.52
SPIN3-216ENST00000638940 ECE1P42892 770 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 USH1GQ495M9 461 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 PRR16Q569H4 304 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 CCDC84Q86UT8 332 aaPredicted RBP11.81□□□□□ -0.52
SPIN3-216ENST00000638940 CREBRFQ8IUR6 639 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 CCDC170Q8IYT3 715 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 SYT2Q8N9I0 419 aaPredicted RBP11.81□□□□□ -0.52
SPIN3-216ENST00000638940 ACER1Q8TDN7 264 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 WDR24Q96S15 920 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 FEZ1Q99689 392 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 PIM2Q9P1W9 311 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 MRFAP1Q9Y605 127 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 EPN1Q9Y6I3 576 aaPredicted RBP11.81□□□□□ -0.52
SPIN3-216ENST00000638940 LOXHD1Q8IVV2 1947 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 RASSF10A6NK89 507 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 FAM86B1E9PN63 330 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 URI1O94763 535 aaPredicted RBP11.81□□□□□ -0.52
SPIN3-216ENST00000638940 FAM86B2P0C5J1 330 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 BRD2P25440 801 aaKnown RBP11.81□□□□□ -0.52
SPIN3-216ENST00000638940 FKBP3Q00688 224 aaKnown RBP11.81□□□□□ -0.52
SPIN3-216ENST00000638940 NAA30Q147X3 362 aaPredicted RBP11.81□□□□□ -0.52
SPIN3-216ENST00000638940 KIAA1755Q5JYT7 1200 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 VAV3Q9UKW4 847 aa11.81□□□□□ -0.52
SPIN3-216ENST00000638940 IGLV3-22A0A075B6J6 115 aa11.8□□□□□ -0.52
SPIN3-216ENST00000638940 POTEB3A0JP26 581 aa11.8□□□□□ -0.52
SPIN3-216ENST00000638940 POTECB2RU33 542 aa11.8□□□□□ -0.52
SPIN3-216ENST00000638940 E9PMD0 336 aa11.8□□□□□ -0.52
SPIN3-216ENST00000638940 GCOM1H8Y6P7 765 aaPredicted RBP11.8□□□□□ -0.52
SPIN3-216ENST00000638940 MSH4O15457 936 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms