RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	CCDC96	Q2M329	555 aa		13.87	□□□□□ -0.19
PAX6-238	ENST00000638755	PLEKHG4	Q58EX7	1191 aa		13.87	□□□□□ -0.19
PAX6-238	ENST00000638755	ZKSCAN2	Q63HK3	967 aa		13.87	□□□□□ -0.19
PAX6-238	ENST00000638755	GIMAP6	Q6P9H5	292 aa		13.87	□□□□□ -0.19
PAX6-238	ENST00000638755	SEPT14	Q6ZU15	432 aa		13.87	□□□□□ -0.19
PAX6-238	ENST00000638755	DHX37	Q8IY37	1157 aa	Known RBP	13.87	□□□□□ -0.19
PAX6-238	ENST00000638755	FIBCD1	Q8N539	461 aa		13.87	□□□□□ -0.19
PAX6-238	ENST00000638755	MSLNL	Q96KJ4	702 aa		13.87	□□□□□ -0.19
PAX6-238	ENST00000638755	HAUS7	Q99871	368 aa		13.87	□□□□□ -0.19
PAX6-238	ENST00000638755	LMAN2L	Q9H0V9	348 aa		13.87	□□□□□ -0.19
PAX6-238	ENST00000638755	STX8	Q9UNK0	236 aa		13.87	□□□□□ -0.19
PAX6-238	ENST00000638755	RALGAPA2	Q2PPJ7	1873 aa		13.87	□□□□□ -0.19
PAX6-238	ENST00000638755	DMD	P11532	3685 aa		13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	MYH7	P12883	1935 aa		13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	C5orf67	F2Z3F1	127 aa		13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	ZNF286B	P0CG31	522 aa		13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	BMPR1A	P36894	532 aa		13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	NBL1	P41271	181 aa		13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	RPS6	P62753	249 aa	Known RBP	13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	ARHGAP1	Q07960	439 aa		13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	CBX2	Q14781	532 aa	Predicted RBP	13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	CCDC62	Q6P9F0	684 aa		13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	ADSSL1	Q8N142	457 aa		13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	SMRP1	Q8NCR6	262 aa		13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	CLEC4D	Q8WXI8	215 aa		13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	SEPT8	Q92599	483 aa		13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	IL17RA	Q96F46	866 aa		13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	RANBP17	Q9H2T7	1088 aa	Known RBP	13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	CLEC1B	Q9P126	229 aa		13.86	□□□□□ -0.19
PAX6-238	ENST00000638755	EPG5	Q9HCE0	2579 aa		13.85	□□□□□ -0.19
PAX6-238	ENST00000638755	PLIN4	Q96Q06	1357 aa		13.85	□□□□□ -0.19
PAX6-238	ENST00000638755	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.85	□□□□□ -0.19
PAX6-238	ENST00000638755	MED19	A0JLT2	244 aa	Predicted RBP	13.85	□□□□□ -0.19
PAX6-238	ENST00000638755		B4DLN1	442 aa		13.85	□□□□□ -0.19
PAX6-238	ENST00000638755	RB1	P06400	928 aa		13.85	□□□□□ -0.19
PAX6-238	ENST00000638755	ATP5J	P18859	108 aa		13.85	□□□□□ -0.19
PAX6-238	ENST00000638755	MRPL12	P52815	198 aa	Known RBP	13.85	□□□□□ -0.19
PAX6-238	ENST00000638755	HIC1	Q14526	733 aa		13.85	□□□□□ -0.19
PAX6-238	ENST00000638755	TTBK2	Q6IQ55	1244 aa		13.85	□□□□□ -0.19
PAX6-238	ENST00000638755	FRMD5	Q7Z6J6	570 aa		13.85	□□□□□ -0.19
PAX6-238	ENST00000638755	FTSJ3	Q8IY81	847 aa	Known RBP	13.85	□□□□□ -0.19
PAX6-238	ENST00000638755	DNER	Q8NFT8	737 aa		13.85	□□□□□ -0.19
PAX6-238	ENST00000638755	NKD2	Q969F2	451 aa	Predicted RBP	13.85	□□□□□ -0.19
PAX6-238	ENST00000638755	KIF1BP	Q96EK5	621 aa		13.85	□□□□□ -0.19
PAX6-238	ENST00000638755	KATNAL1	Q9BW62	490 aa		13.85	□□□□□ -0.19
PAX6-238	ENST00000638755	USP15	Q9Y4E8	981 aa	Predicted RBP	13.85	□□□□□ -0.19
PAX6-238	ENST00000638755	WDR87	Q6ZQQ6	2873 aa		13.85	□□□□□ -0.19
PAX6-238	ENST00000638755	NMT2	O60551	498 aa		13.84	□□□□□ -0.19
PAX6-238	ENST00000638755	NUBP1	P53384	320 aa		13.84	□□□□□ -0.19
PAX6-238	ENST00000638755	ZBTB33	Q86T24	672 aa		13.84	□□□□□ -0.19
PAX6-238	ENST00000638755	RIPOR3	Q96MK2	946 aa		13.84	□□□□□ -0.19
PAX6-238	ENST00000638755	PHF7	Q9BWX1	381 aa	Predicted RBP	13.84	□□□□□ -0.19
PAX6-238	ENST00000638755	OSBPL7	Q9BZF2	842 aa		13.84	□□□□□ -0.19
PAX6-238	ENST00000638755	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.84	□□□□□ -0.19
PAX6-238	ENST00000638755	MMP1	P03956	469 aa		13.83	□□□□□ -0.2
PAX6-238	ENST00000638755	CTSH	P09668	335 aa		13.83	□□□□□ -0.2
PAX6-238	ENST00000638755	LINC00271	P0C7V0	271 aa		13.83	□□□□□ -0.2
PAX6-238	ENST00000638755	ICAM3	P32942	547 aa		13.83	□□□□□ -0.2
PAX6-238	ENST00000638755	COASY	Q13057	564 aa		13.83	□□□□□ -0.2
PAX6-238	ENST00000638755	PTPN21	Q16825	1174 aa		13.83	□□□□□ -0.2
PAX6-238	ENST00000638755	SYDE2	Q5VT97	1194 aa		13.83	□□□□□ -0.2
PAX6-238	ENST00000638755	ADGRD2	Q7Z7M1	963 aa		13.83	□□□□□ -0.2
PAX6-238	ENST00000638755	RBM23	Q86U06	439 aa	Known RBP	13.83	□□□□□ -0.2
PAX6-238	ENST00000638755	SERINC5	Q86VE9	423 aa		13.83	□□□□□ -0.2
PAX6-238	ENST00000638755	PPP2R3C	Q969Q6	453 aa		13.83	□□□□□ -0.2
PAX6-238	ENST00000638755	OSBP2	Q969R2	916 aa		13.83	□□□□□ -0.2
PAX6-238	ENST00000638755	RWDD3	Q9Y3V2	267 aa		13.83	□□□□□ -0.2
PAX6-238	ENST00000638755	NCOR2	Q9Y618	2525 aa		13.82	□□□□□ -0.2
PAX6-238	ENST00000638755	HAS3	O00219	553 aa		13.82	□□□□□ -0.2
PAX6-238	ENST00000638755	F2	P00734	622 aa		13.82	□□□□□ -0.2
PAX6-238	ENST00000638755	NRIP1	P48552	1158 aa		13.82	□□□□□ -0.2
PAX6-238	ENST00000638755	CAMK1	Q14012	370 aa		13.82	□□□□□ -0.2
PAX6-238	ENST00000638755	EFHB	Q8N7U6	833 aa		13.82	□□□□□ -0.2
PAX6-238	ENST00000638755	GPCPD1	Q9NPB8	672 aa		13.82	□□□□□ -0.2
PAX6-238	ENST00000638755	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.82	□□□□□ -0.2
PAX6-238	ENST00000638755	ADGRA3	Q8IWK6	1321 aa		13.82	□□□□□ -0.2
PAX6-238	ENST00000638755	TSPY2	A6NKD2	308 aa		13.81	□□□□□ -0.2
PAX6-238	ENST00000638755	GPAA1	O43292	621 aa		13.81	□□□□□ -0.2
PAX6-238	ENST00000638755	SORBS3	O60504	671 aa		13.81	□□□□□ -0.2
PAX6-238	ENST00000638755	SLC3A2	P08195	630 aa	Known RBP	13.81	□□□□□ -0.2
PAX6-238	ENST00000638755	RLBP1	P12271	317 aa		13.81	□□□□□ -0.2
PAX6-238	ENST00000638755	PPP4R3B	Q5MIZ7	849 aa		13.81	□□□□□ -0.2
PAX6-238	ENST00000638755	DGLUCY	Q7Z3D6	616 aa		13.81	□□□□□ -0.2
PAX6-238	ENST00000638755	IFNL3	Q8IZI9	196 aa		13.81	□□□□□ -0.2
PAX6-238	ENST00000638755	TMEM105	Q8N8V8	129 aa		13.81	□□□□□ -0.2
PAX6-238	ENST00000638755	DCAF4	Q8WV16	495 aa		13.81	□□□□□ -0.2
PAX6-238	ENST00000638755	ATP6V0A1	Q93050	837 aa		13.81	□□□□□ -0.2
PAX6-238	ENST00000638755	IL17RB	Q9NRM6	502 aa		13.81	□□□□□ -0.2
PAX6-238	ENST00000638755	PLAGL2	Q9UPG8	496 aa		13.81	□□□□□ -0.2
PAX6-238	ENST00000638755	TPR	P12270	2363 aa	Known RBP	13.81	□□□□□ -0.2
PAX6-238	ENST00000638755	EP300	Q09472	2414 aa	Predicted RBP	13.81	□□□□□ -0.2
PAX6-238	ENST00000638755	GNAT2	P19087	354 aa		13.8	□□□□□ -0.2
PAX6-238	ENST00000638755	SP100	P23497	879 aa	Predicted RBP	13.8	□□□□□ -0.2
PAX6-238	ENST00000638755	DNAJB1	P25685	340 aa		13.8	□□□□□ -0.2
PAX6-238	ENST00000638755	BTG3	Q14201	252 aa	Predicted RBP	13.8	□□□□□ -0.2
PAX6-238	ENST00000638755	BTNL9	Q6UXG8	535 aa		13.8	□□□□□ -0.2
PAX6-238	ENST00000638755	PPTC7	Q8NI37	304 aa		13.8	□□□□□ -0.2
PAX6-238	ENST00000638755	CLP1	Q92989	425 aa	Known RBP	13.8	□□□□□ -0.2
PAX6-238	ENST00000638755	RMDN1	Q96DB5	314 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms