RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	LINGO3	P0C6S8	592 aa		12.19	□□□□□ -0.46
STRADA-231	ENST00000638708	CSB-PGBD3	P0DP91	1061 aa		12.19	□□□□□ -0.46
STRADA-231	ENST00000638708	PDE6A	P16499	860 aa		12.19	□□□□□ -0.46
STRADA-231	ENST00000638708	PPP1R2	P41236	205 aa		12.19	□□□□□ -0.46
STRADA-231	ENST00000638708	CCNG1	P51959	295 aa		12.19	□□□□□ -0.46
STRADA-231	ENST00000638708	IL17A	Q16552	155 aa		12.19	□□□□□ -0.46
STRADA-231	ENST00000638708	MEI1	Q5TIA1	1274 aa		12.19	□□□□□ -0.46
STRADA-231	ENST00000638708	ARL6IP4	Q66PJ3	421 aa	Known RBP	12.19	□□□□□ -0.46
STRADA-231	ENST00000638708	MFSD6	Q6ZSS7	791 aa		12.19	□□□□□ -0.46
STRADA-231	ENST00000638708	PIGW	Q7Z7B1	504 aa		12.19	□□□□□ -0.46
STRADA-231	ENST00000638708	TBC1D1	Q86TI0	1168 aa	Predicted RBP	12.19	□□□□□ -0.46
STRADA-231	ENST00000638708	APLF	Q8IW19	511 aa	Predicted RBP	12.19	□□□□□ -0.46
STRADA-231	ENST00000638708	YIPF3	Q9GZM5	350 aa		12.19	□□□□□ -0.46
STRADA-231	ENST00000638708	DISC1	Q9NRI5	854 aa		12.19	□□□□□ -0.46
STRADA-231	ENST00000638708	ZFAT	Q9P243	1243 aa		12.19	□□□□□ -0.46
STRADA-231	ENST00000638708	FBXL5	Q9UKA1	691 aa		12.19	□□□□□ -0.46
STRADA-231	ENST00000638708	ARAP2	Q8WZ64	1704 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	PLCH1	Q4KWH8	1693 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	TCRBV5S4A2T	A0A5A2	114 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	FER	P16591	822 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	SLC1A4	P43007	532 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	RASSF7	Q02833	373 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	CWF19L1	Q69YN2	538 aa	Known RBP	12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	SLC30A9	Q6PML9	568 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	FAM43B	Q6ZT52	329 aa	Predicted RBP	12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	NBPF5P	Q86XG9	351 aa	Predicted RBP	12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	IFNL3	Q8IZI9	196 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	NUP133	Q8WUM0	1156 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	UBLCP1	Q8WVY7	318 aa	Predicted RBP	12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	PIH1D3	Q9NQM4	214 aa	Known RBP	12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	PANK4	Q9NVE7	773 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	PCDHGC5	Q9Y5F6	944 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	MYH4	Q9Y623	1939 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	SPATA31A3	Q5VYP0	1347 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	MPHOSPH10	O00566	681 aa	Known RBP	12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	CTNND1	O60716	968 aa	Known RBP	12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	PALM	O75781	387 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	ATF3	P18847	181 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	NPY5R	Q15761	445 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	KRT71	Q3SY84	523 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	CCDC38	Q502W7	563 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	SPDYC	Q5MJ68	293 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	TRPM8	Q7Z2W7	1104 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	ANKRD13C	Q8N6S4	541 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	TEX9	Q8N6V9	391 aa		12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	LUC7L	Q9NQ29	371 aa	Known RBP	12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	12.18	□□□□□ -0.46
STRADA-231	ENST00000638708	LRRC53	A6NM62	1247 aa		12.17	□□□□□ -0.46
STRADA-231	ENST00000638708	EPHB6	O15197	1021 aa		12.17	□□□□□ -0.46
STRADA-231	ENST00000638708	ZNF131	P52739	623 aa		12.17	□□□□□ -0.46
STRADA-231	ENST00000638708	EIF3B	P55884	814 aa	Known RBP	12.17	□□□□□ -0.46
STRADA-231	ENST00000638708	NCALD	P61601	193 aa		12.17	□□□□□ -0.46
STRADA-231	ENST00000638708	FUT2	Q10981	343 aa		12.17	□□□□□ -0.46
STRADA-231	ENST00000638708	KIAA0753	Q2KHM9	967 aa		12.17	□□□□□ -0.46
STRADA-231	ENST00000638708	PDXDC1	Q6P996	788 aa		12.17	□□□□□ -0.46
STRADA-231	ENST00000638708	KRT28	Q7Z3Y7	464 aa		12.17	□□□□□ -0.46
STRADA-231	ENST00000638708	KLHL7	Q8IXQ5	586 aa		12.17	□□□□□ -0.46
STRADA-231	ENST00000638708	ZKSCAN3	Q9BRR0	538 aa		12.17	□□□□□ -0.46
STRADA-231	ENST00000638708	EDEM3	Q9BZQ6	932 aa		12.17	□□□□□ -0.46
STRADA-231	ENST00000638708	SAMD15	Q9P1V8	674 aa		12.17	□□□□□ -0.46
STRADA-231	ENST00000638708	ABCB11	O95342	1321 aa		12.17	□□□□□ -0.46
STRADA-231	ENST00000638708	DCDC2C	A8MYV0	355 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708		F8VZ95	297 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	ABLIM1	O14639	778 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	IDH1	O75874	414 aa	Known RBP	12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	FTCD	O95954	541 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	ALDH5A1	P51649	535 aa	Predicted RBP	12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	NAB2	Q15742	525 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	CCDC57	Q2TAC2	916 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	NAALADL2	Q58DX5	795 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	THEMIS2	Q5TEJ8	643 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	LMOD2	Q6P5Q4	547 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	ARHGAP27	Q6ZUM4	889 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	TMC3	Q7Z5M5	1100 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	HOOK3	Q86VS8	718 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	TTC5	Q8N0Z6	440 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	STAG2	Q8N3U4	1231 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	ATXN2L	Q8WWM7	1075 aa	Known RBP	12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	BAP1	Q92560	729 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	OSBPL1A	Q9BXW6	950 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	NSRP1	Q9H0G5	558 aa	Known RBP	12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	NEUROG2	Q9H2A3	272 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	CCDC134	Q9H6E4	229 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	C1orf167	Q5SNV9	1468 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	STXBP3	O00186	592 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	SART1	O43290	800 aa	Known RBP	12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	PRDM1	O75626	825 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	WFS1	O76024	890 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	MME	P08473	750 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	ABL2	P42684	1182 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	ROR2	Q01974	943 aa	Known RBP	12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	GFPT1	Q06210	699 aa	Predicted RBP	12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	VWA3B	Q502W6	1294 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	RRP12	Q5JTH9	1297 aa	Known RBP	12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	ANKRD20A2	Q5SQ80	823 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	ANKRD20A1	Q5TYW2	823 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	ANKRD20A3	Q5VUR7	823 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	ANKRD40	Q6AI12	368 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	RRAGA	Q7L523	313 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	CCDC84	Q86UT8	332 aa	Predicted RBP	12.16	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms