RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	CALM1	P0DP23	149 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	CALM2	P0DP24	149 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	CALM3	P0DP25	149 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	UBA7	P41226	1012 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	GRIK3	Q13003	919 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	XRCC4	Q13426	336 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	RASGRF1	Q13972	1273 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	LACTB2	Q53H82	288 aa	Predicted RBP	15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	RRAGA	Q7L523	313 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	TAX1BP1	Q86VP1	789 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	C4orf32	Q8N8J7	132 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	MMRN2	Q9H8L6	949 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	SLC12A6	Q9UHW9	1150 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	LOC102724428	A0A0B4J2F2	783 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	EPHB6	O15197	1021 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	SIK1	P57059	783 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	TNNC1	P63316	161 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	NAA25	Q14CX7	972 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	TRADD	Q15628	312 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	ODF2	Q5BJF6	829 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	TLDC1	Q6P9B6	456 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	DTHD1	Q6ZMT9	781 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	ARMC9	Q7Z3E5	817 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	P3H4	Q92791	437 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	CCDC87	Q9NVE4	849 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	KBTBD4	Q9NVX7	518 aa		15.03	■□□□□ -0
KCNMA1-238	ENST00000638514	LRRC53	A6NM62	1247 aa		15.02	■□□□□ -0
KCNMA1-238	ENST00000638514	PPP1R12B	O60237	982 aa	Predicted RBP	15.02	■□□□□ -0
KCNMA1-238	ENST00000638514	PDE4D	Q08499	809 aa		15.02	■□□□□ -0
KCNMA1-238	ENST00000638514	CCDC178	Q5BJE1	867 aa		15.02	■□□□□ -0
KCNMA1-238	ENST00000638514	LPIN2	Q92539	896 aa		15.02	■□□□□ -0
KCNMA1-238	ENST00000638514	NLRP3	Q96P20	1036 aa		15.02	■□□□□ -0
KCNMA1-238	ENST00000638514	TAF1D	Q9H5J8	278 aa	Predicted RBP	15.02	■□□□□ -0
KCNMA1-238	ENST00000638514	CNTNAP5	Q8WYK1	1306 aa		15.02	■□□□□ -0
KCNMA1-238	ENST00000638514	C5orf60	A6NFR6	353 aa		15.02	□□□□□ -0.01
KCNMA1-238	ENST00000638514	PP2D1	A8MPX8	630 aa		15.02	□□□□□ -0.01
KCNMA1-238	ENST00000638514	USP17L12	C9JPN9	530 aa		15.02	□□□□□ -0.01
KCNMA1-238	ENST00000638514	USP17L21	D6R901	530 aa		15.02	□□□□□ -0.01
KCNMA1-238	ENST00000638514	RAD51C	O43502	376 aa		15.02	□□□□□ -0.01
KCNMA1-238	ENST00000638514	TMOD1	P28289	359 aa		15.02	□□□□□ -0.01
KCNMA1-238	ENST00000638514	RFC4	P35249	363 aa		15.02	□□□□□ -0.01
KCNMA1-238	ENST00000638514	HSD17B3	P37058	310 aa		15.02	□□□□□ -0.01
KCNMA1-238	ENST00000638514	SLC1A4	P43007	532 aa		15.02	□□□□□ -0.01
KCNMA1-238	ENST00000638514	GFPT1	Q06210	699 aa	Predicted RBP	15.02	□□□□□ -0.01
KCNMA1-238	ENST00000638514	BIRC3	Q13489	604 aa		15.02	□□□□□ -0.01
KCNMA1-238	ENST00000638514	RUFY4	Q6ZNE9	571 aa		15.02	□□□□□ -0.01
KCNMA1-238	ENST00000638514	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	15.02	□□□□□ -0.01	7e-7	■■■■■ 73.9
KCNMA1-238	ENST00000638514	SIK3	Q9Y2K2	1263 aa		15.02	□□□□□ -0.01
KCNMA1-238	ENST00000638514	CHRND	Q07001	517 aa		15.02	□□□□□ -0.01
KCNMA1-238	ENST00000638514	MSL1	Q68DK7	614 aa		15.02	□□□□□ -0.01
KCNMA1-238	ENST00000638514	LRRC45	Q96CN5	670 aa		15.02	□□□□□ -0.01
KCNMA1-238	ENST00000638514	OPLAH	O14841	1288 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	SCG2	P13521	617 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	NBPF9	Q3BBW0	867 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	VWA3B	Q502W6	1294 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	GKAP1	Q5VSY0	366 aa	Predicted RBP	15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	HVCN1	Q96D96	273 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	KIF9	Q9HAQ2	790 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	NKRF	O15226	690 aa	Known RBP eCLIP	15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	MGRN1	O60291	552 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	PALM	O75781	387 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	DNAJC8	O75937	253 aa	Predicted RBP	15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	CTNNA1	P35221	906 aa	Known RBP	15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	PPP1R2	P41236	205 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	PPP2R2A	P63151	447 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	TROAP	Q12815	778 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	OR2W6P	Q8NHA6	318 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	SMIM22	K7EJ46	135 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	FTCD	O95954	541 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	RNASE9	P60153	205 aa	Known RBP	15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	KLHL7	Q8IXQ5	586 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	RAPGEF5	Q92565	580 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	RSRC1	Q96IZ7	334 aa	Known RBP	15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	ISCU	Q9H1K1	167 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	NDST4	Q9H3R1	872 aa		15.01	□□□□□ -0.01
KCNMA1-238	ENST00000638514	BACH1	O14867	736 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	DDAH1	O94760	285 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	STK4	Q13043	487 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	TDRD12	Q587J7	1177 aa	Known RBP	15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	CPLX4	Q7Z7G2	160 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	CCDC84	Q86UT8	332 aa	Predicted RBP	15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	TATDN2	Q93075	761 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	GHR	P10912	638 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	GCK	P35557	465 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	ZNF844	Q08AG5	666 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	BYSL	Q13895	437 aa	Known RBP	15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	TMC4	Q7Z404	712 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	SRBD1	Q8N5C6	995 aa	Known RBP	15	□□□□□ -0.01
KCNMA1-238	ENST00000638514		H0YGN5	161 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	ADAMTS3	O15072	1205 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	ASIC1	P78348	528 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	ASTE1	Q2TB18	679 aa	Predicted RBP	15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	AGBL2	Q5U5Z8	902 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	CACNA2D4	Q7Z3S7	1137 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	HEATR3	Q7Z4Q2	680 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	ZNF444	Q8N0Y2	327 aa	Predicted RBP	15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	CCSER1	Q9C0I3	900 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	KDM4C	Q9H3R0	1056 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	NFS1	Q9Y697	457 aa		15	□□□□□ -0.01
KCNMA1-238	ENST00000638514	SSU72P8	A0A1W2PR75	194 aa		14.99	□□□□□ -0.01

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