RNA–Protein interactions for RNA: ENST00000637500.1

TCF4-287, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-287	ENST00000637500	PMS1	P54277	932 aa	Known RBP	2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	FAM160A1	Q05DH4	1040 aa		2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	GRM7	Q14831	915 aa		2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	AXDND1	Q5T1B0	1012 aa	Predicted RBP	2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	DCAF15	Q66K64	600 aa		2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	INTS3	Q68E01	1043 aa	Known RBP	2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	TRMT10B	Q6PF06	316 aa	Known RBP	2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	ZNF808	Q8N4W9	903 aa	Predicted RBP	2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	C9orf106	Q8NAJ2	232 aa		2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	FAM89A	Q96GI7	184 aa		2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	DHRS1	Q96LJ7	313 aa		2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	KATNBL1	Q9H079	304 aa		2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	AP5M1	Q9H0R1	490 aa		2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	HSPBP1	Q9NZL4	362 aa		2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	CROT	Q9UKG9	612 aa		2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	SF3B6	Q9Y3B4	125 aa	Known RBP	2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	ZNF451	Q9Y4E5	1061 aa		2.09	□□□□□ -2.07
TCF4-287	ENST00000637500	SUPT5H	O00267	1087 aa	Known RBP	2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	TLR3	O15455	904 aa	Known RBP	2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	CTSH	P09668	335 aa		2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	CDK4	P11802	303 aa		2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	CLC	Q05315	142 aa		2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	CWF19L2	Q2TBE0	894 aa	Known RBP	2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	NOL9	Q5SY16	702 aa	Known RBP	2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	TEPP	Q6URK8	271 aa		2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	MILR1	Q7Z6M3	343 aa		2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	PPFIBP1	Q86W92	1011 aa		2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	CCDC144CP	Q8IYA2	1237 aa		2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	REXO1	Q8N1G1	1221 aa	Known RBP	2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	WRNIP1	Q96S55	665 aa		2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	TMEM209	Q96SK2	561 aa		2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	GPRC5B	Q9NZH0	403 aa		2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	BIN2	Q9UBW5	565 aa	Predicted RBP	2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	DIS3	Q9Y2L1	958 aa	Known RBP	2.08	□□□□□ -2.08
TCF4-287	ENST00000637500	KRTAP23-1	A1A580	65 aa		2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	MATN2	O00339	956 aa		2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	NPHS1	O60500	1241 aa		2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	KNG1	P01042	644 aa		2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	CHGB	P05060	677 aa		2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	CR2	P20023	1033 aa		2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	POU3F3	P20264	500 aa	Predicted RBP	2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	GBP2	P32456	591 aa	Predicted RBP	2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	SLC25A3	Q00325	362 aa		2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	FSTL1	Q12841	308 aa		2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	MAPK7	Q13164	816 aa		2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	SNAP47	Q5SQN1	464 aa		2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	MBNL2	Q5VZF2	373 aa	Known RBP	2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	MBLAC2	Q68D91	279 aa		2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	FBXL19	Q6PCT2	694 aa		2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	PROSER1	Q86XN7	944 aa		2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	TMPRSS6	Q8IU80	811 aa		2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	RIOX2	Q8IUF8	465 aa		2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	SMARCC1	Q92922	1105 aa	Predicted RBP	2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	TOE1	Q96GM8	510 aa	Known RBP	2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	NOL6	Q9H6R4	1146 aa	Known RBP	2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	DTL	Q9NZJ0	730 aa		2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	HECA	Q9UBI9	543 aa	Predicted RBP	2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	PTPN22	Q9Y2R2	807 aa		2.07	□□□□□ -2.08
TCF4-287	ENST00000637500	C2orf71	A6NGG8	1288 aa		2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	PRPF40A	O75400	957 aa	Known RBP	2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	PAM	P19021	973 aa		2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	CD38	P28907	300 aa		2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	CRK	P46108	304 aa		2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	RAC3	P60763	192 aa		2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	RBM10	P98175	930 aa	Known RBP	2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	FOXL1	Q12952	345 aa		2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	LRRFIP1	Q32MZ4	808 aa	Known RBP	2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	GPR155	Q7Z3F1	870 aa		2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	ADGRG3	Q86Y34	549 aa		2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	RELL1	Q8IUW5	271 aa		2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	ARRDC4	Q8NCT1	418 aa		2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	ZDHHC15	Q96MV8	337 aa		2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	PDGFD	Q9GZP0	370 aa	Predicted RBP	2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	RIOX1	Q9H6W3	641 aa		2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	SYNPO2L	Q9H987	977 aa		2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	OAZ3	Q9UMX2	235 aa		2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	GNE	Q9Y223	722 aa	Known RBP	2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	COL3A1	P02461	1466 aa	Predicted RBP	2.06	□□□□□ -2.08
TCF4-287	ENST00000637500	TRBV23OR9-2	A0A075B6M9	112 aa		2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	NPHP3-ACAD11	A0A0J9YXS1	232 aa		2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	TCRBV5S2	A0A599	114 aa		2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	ARID3C	A6NKF2	412 aa		2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	ZAR1L	A6NP61	321 aa		2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	MINDY4B	A8MYZ0	360 aa		2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	C22orf46	C9J442	243 aa		2.05	□□□□□ -2.08
TCF4-287	ENST00000637500		H0Y858	1186 aa		2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	STXBP3	O00186	592 aa		2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	CBFA2T2	O43439	604 aa		2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	VAMP4	O75379	141 aa		2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	TADA3	O75528	432 aa		2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	RHOBTB3	O94955	611 aa		2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	THBD	P07204	575 aa		2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	ZNF888	P0CJ79	500 aa	Predicted RBP	2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	HIBADH	P31937	336 aa	Known RBP	2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	SEPHS1	P49903	392 aa		2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	RNF151	Q2KHN1	245 aa		2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	TDRD10	Q5VZ19	366 aa	Known RBP	2.05	□□□□□ -2.08
TCF4-287	ENST00000637500	SPTY2D1	Q68D10	685 aa	Predicted RBP	2.05	□□□□□ -2.08

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms