RNA–Protein interactions for RNA: ENST00000637475.1

CACNA1A-241, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-241ENST00000637475 SMIM5Q71RC9 77 aa21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 ARFGAP2Q8N6H7 521 aa21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 NSUN4Q96CB9 384 aaKnown RBP21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 RNPC3Q96LT9 517 aaKnown RBP21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 CCDC43Q96MW1 224 aaKnown RBP21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 ZMYND12Q9H0C1 365 aa21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 COL4A1P02462 1669 aa21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 LOC102724428A0A0B4J2F2 783 aa21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 FAM107AO95990 144 aa21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 GLI1P08151 1106 aa21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 MDH1P40925 334 aaKnown RBP21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 SIK1P57059 783 aa21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 CDC37Q16543 378 aaPredicted RBP21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 INF2Q27J81 1249 aa21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 LRRC55Q6ZSA7 311 aa21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 AMIGO3Q86WK7 504 aa21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 ZNF473Q8WTR7 871 aaKnown RBP21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 PLCB1Q9NQ66 1216 aa21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 TMEM59LQ9UK28 342 aa21.65■■□□□ 1.06
CACNA1A-241ENST00000637475 HEXIM1O94992 359 aaKnown RBP21.64■■□□□ 1.05
CACNA1A-241ENST00000637475 FCER1AP12319 257 aa21.64■■□□□ 1.05
CACNA1A-241ENST00000637475 YY1P25490 414 aa21.64■■□□□ 1.05
CACNA1A-241ENST00000637475 CARSP49589 748 aaKnown RBP21.64■■□□□ 1.05
CACNA1A-241ENST00000637475 EHHADHQ08426 723 aa21.64■■□□□ 1.05
CACNA1A-241ENST00000637475 NAB2Q15742 525 aa21.64■■□□□ 1.05
CACNA1A-241ENST00000637475 MSL1Q68DK7 614 aa21.64■■□□□ 1.05
CACNA1A-241ENST00000637475 CERS3Q8IU89 383 aa21.64■■□□□ 1.05
CACNA1A-241ENST00000637475 GPKOWQ92917 476 aaPredicted RBP eCLIP21.64■■□□□ 1.05
CACNA1A-241ENST00000637475 MMTAG2Q9BU76 263 aaKnown RBP21.64■■□□□ 1.05
CACNA1A-241ENST00000637475 VCPKMTQ9H867 229 aa21.64■■□□□ 1.05
CACNA1A-241ENST00000637475 RIC8AQ9NPQ8 531 aa21.64■■□□□ 1.05
CACNA1A-241ENST00000637475 CEP72Q9P209 647 aa21.64■■□□□ 1.05
CACNA1A-241ENST00000637475 MAD2L2Q9UI95 211 aa21.64■■□□□ 1.05
CACNA1A-241ENST00000637475 SAMM50Q9Y512 469 aa21.64■■□□□ 1.05
CACNA1A-241ENST00000637475 CAPN7Q9Y6W3 813 aa21.64■■□□□ 1.05
CACNA1A-241ENST00000637475 CCDC88AQ3V6T2 1871 aa21.63■■□□□ 1.05
CACNA1A-241ENST00000637475 SMTNP53814 917 aa21.63■■□□□ 1.05
CACNA1A-241ENST00000637475 PSMD2Q13200 908 aa21.63■■□□□ 1.05
CACNA1A-241ENST00000637475 ITGB3BPQ13352 177 aaPredicted RBP21.63■■□□□ 1.05
CACNA1A-241ENST00000637475 RASGRP4Q8TDF6 673 aa21.63■■□□□ 1.05
CACNA1A-241ENST00000637475 BAZ2BQ9UIF8 2168 aaKnown RBP21.63■■□□□ 1.05
CACNA1A-241ENST00000637475 TSPY2A6NKD2 308 aa21.63■■□□□ 1.05
CACNA1A-241ENST00000637475 SERPING1P05155 500 aa21.63■■□□□ 1.05
CACNA1A-241ENST00000637475 SETQ01105 290 aaPredicted RBP21.63■■□□□ 1.05
CACNA1A-241ENST00000637475 CAVIN4Q5BKX8 364 aa21.63■■□□□ 1.05
CACNA1A-241ENST00000637475 FAM47AQ5JRC9 791 aa21.63■■□□□ 1.05
CACNA1A-241ENST00000637475 MEI1Q5TIA1 1274 aa21.63■■□□□ 1.05
CACNA1A-241ENST00000637475 RRAGAQ7L523 313 aa21.63■■□□□ 1.05
CACNA1A-241ENST00000637475 FBXO33Q7Z6M2 555 aa21.63■■□□□ 1.05
CACNA1A-241ENST00000637475 LINC00116Q8NCU8 138 aa21.63■■□□□ 1.05
CACNA1A-241ENST00000637475 PNMA1Q8ND90 353 aa21.63■■□□□ 1.05
CACNA1A-241ENST00000637475 MYCBPAPQ8TBZ2 947 aa21.63■■□□□ 1.05
CACNA1A-241ENST00000637475 NKRFO15226 690 aaKnown RBP eCLIP21.62■■□□□ 1.05
CACNA1A-241ENST00000637475 KRT14P02533 472 aa21.62■■□□□ 1.05
CACNA1A-241ENST00000637475 MNAT1P51948 309 aa21.62■■□□□ 1.05
CACNA1A-241ENST00000637475 ACTN3Q08043 901 aaPredicted RBP21.62■■□□□ 1.05
CACNA1A-241ENST00000637475 SLC35G1Q2M3R5 365 aa21.62■■□□□ 1.05
CACNA1A-241ENST00000637475 NLRP14Q86W24 1093 aa21.62■■□□□ 1.05
CACNA1A-241ENST00000637475 SPZ1Q9BXG8 430 aa21.62■■□□□ 1.05
CACNA1A-241ENST00000637475 ACTR5Q9H9F9 607 aaPredicted RBP21.62■■□□□ 1.05
CACNA1A-241ENST00000637475 TMBIM4Q9HC24 238 aa21.62■■□□□ 1.05
CACNA1A-241ENST00000637475 FAM207AQ9NSI2 230 aaPredicted RBP21.62■■□□□ 1.05
CACNA1A-241ENST00000637475 NFU1Q9UMS0 254 aa21.62■■□□□ 1.05
CACNA1A-241ENST00000637475 PALM3A6NDB9 673 aaPredicted RBP21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 NCK2O43639 380 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 CAMTA2O94983 1202 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 FAM153BP0C7A2 387 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 GYG1P46976 350 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 TNNC1P63316 161 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 ITPK1Q13572 414 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 FAM153CQ494X1 144 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 SLC9C1Q4G0N8 1177 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 TAX1BP1Q86VP1 789 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 SH2D3CQ8N5H7 860 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 CASKIN2Q8WXE0 1202 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 ISCUQ9H1K1 167 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 EPB41L5Q9HCM4 733 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 FAM153AQ9UHL3 310 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 SMARCA1P28370 1054 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 CXCR5P32302 372 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 SLC1A4P43007 532 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 MATR3P43243 847 aaKnown RBP eCLIP21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 CUL1Q13616 776 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 NONOQ15233 471 aaKnown RBP eCLIP21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 SV2BQ7L1I2 683 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 CALML4Q96GE6 196 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 FAM84BQ96KN1 310 aaPredicted RBP21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 CCT8L2Q96SF2 557 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 LRRC27Q9C0I9 530 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 MMRN2Q9H8L6 949 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 BSDC1Q9NW68 430 aaPredicted RBP21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 SMARCAL1Q9NZC9 954 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 EHD2Q9NZN4 543 aa21.61■■□□□ 1.05
CACNA1A-241ENST00000637475 KIF13BQ9NQT8 1826 aa21.6■■□□□ 1.05
CACNA1A-241ENST00000637475 CHUKO15111 745 aa21.6■■□□□ 1.05
CACNA1A-241ENST00000637475 RASSF9O75901 435 aa21.6■■□□□ 1.05
CACNA1A-241ENST00000637475 PAEPP09466 180 aa21.6■■□□□ 1.05
CACNA1A-241ENST00000637475 ATP6V1AP38606 617 aa21.6■■□□□ 1.05
CACNA1A-241ENST00000637475 FXR2P51116 673 aaKnown RBP eCLIP21.6■■□□□ 1.05
CACNA1A-241ENST00000637475 MARSP56192 900 aaKnown RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms