RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 MXRA8Q9BRK3 442 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 PDCD2LQ9BRP1 358 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 GRPEL1Q9HAV7 217 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 ZCCHC17Q9NP64 241 aaKnown RBP17.28■□□□□ 0.36
CLN6-219ENST00000637329 ANO10Q9NW15 660 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 STK17AQ9UEE5 414 aa17.28■□□□□ 0.36
CLN6-219ENST00000637329 PP2D1A8MPX8 630 aa17.27■□□□□ 0.36
CLN6-219ENST00000637329 SMC2O95347 1197 aa17.27■□□□□ 0.36
CLN6-219ENST00000637329 CCND2P30279 289 aa17.27■□□□□ 0.36
CLN6-219ENST00000637329 SPIRE1Q08AE8 756 aa17.27■□□□□ 0.36
CLN6-219ENST00000637329 KARSQ15046 597 aaKnown RBP17.27■□□□□ 0.36
CLN6-219ENST00000637329 HYIQ5T013 277 aa17.27■□□□□ 0.36
CLN6-219ENST00000637329 NT5DC1Q5TFE4 455 aa17.27■□□□□ 0.36
CLN6-219ENST00000637329 ARHGEF16Q5VV41 709 aa17.27■□□□□ 0.36
CLN6-219ENST00000637329 RRAGBQ5VZM2 374 aa17.27■□□□□ 0.36
CLN6-219ENST00000637329 RASAL3Q86YV0 1011 aa17.27■□□□□ 0.36
CLN6-219ENST00000637329 KCTD17Q8N5Z5 321 aa17.27■□□□□ 0.36
CLN6-219ENST00000637329 NSUN6Q8TEA1 469 aaKnown RBP17.27■□□□□ 0.36
CLN6-219ENST00000637329 BRI3BPQ8WY22 251 aa17.27■□□□□ 0.36
CLN6-219ENST00000637329 SLC5A5Q92911 643 aa17.27■□□□□ 0.36
CLN6-219ENST00000637329 PAGR1Q9BTK6 254 aa17.27■□□□□ 0.36
CLN6-219ENST00000637329 NT5C3AQ9H0P0 336 aa17.27■□□□□ 0.36
CLN6-219ENST00000637329 UBIAD1Q9Y5Z9 338 aa17.27■□□□□ 0.36
CLN6-219ENST00000637329 TLL2Q9Y6L7 1015 aa17.27■□□□□ 0.36
CLN6-219ENST00000637329 LCTP09848 1927 aa17.27■□□□□ 0.35
CLN6-219ENST00000637329 TESPA1A2RU30 521 aaPredicted RBP17.26■□□□□ 0.35
CLN6-219ENST00000637329 POTEMA6NI47 508 aa17.26■□□□□ 0.35
CLN6-219ENST00000637329 BTBD19C9JJ37 291 aa17.26■□□□□ 0.35
CLN6-219ENST00000637329 PDHXO00330 501 aa17.26■□□□□ 0.35
CLN6-219ENST00000637329 GCLCP48506 637 aaPredicted RBP17.26■□□□□ 0.35
CLN6-219ENST00000637329 SEMA3FQ13275 785 aa17.26■□□□□ 0.35
CLN6-219ENST00000637329 TRIML1Q8N9V2 468 aa17.26■□□□□ 0.35
CLN6-219ENST00000637329 ERMNQ8TAM6 284 aa17.26■□□□□ 0.35
CLN6-219ENST00000637329 SPATA20Q8TB22 786 aa17.26■□□□□ 0.35
CLN6-219ENST00000637329 FAM200AQ8TCP9 573 aa17.26■□□□□ 0.35
CLN6-219ENST00000637329 SNX29Q8TEQ0 813 aa17.26■□□□□ 0.35
CLN6-219ENST00000637329 CDK5RAP3Q96JB5 506 aa17.26■□□□□ 0.35
CLN6-219ENST00000637329 TAAR1Q96RJ0 339 aa17.26■□□□□ 0.35
CLN6-219ENST00000637329 PARK7Q99497 189 aaKnown RBP17.26■□□□□ 0.35
CLN6-219ENST00000637329 RIT2Q99578 217 aa17.26■□□□□ 0.35
CLN6-219ENST00000637329 MMTAG2Q9BU76 263 aaKnown RBP17.26■□□□□ 0.35
CLN6-219ENST00000637329 MOV10L1Q9BXT6 1211 aaKnown RBP17.26■□□□□ 0.35
CLN6-219ENST00000637329 WDR11Q9BZH6 1224 aa17.26■□□□□ 0.35
CLN6-219ENST00000637329 MROH8Q9H579 483 aa17.26■□□□□ 0.35
CLN6-219ENST00000637329 RBPJLQ9UBG7 517 aa17.26■□□□□ 0.35
CLN6-219ENST00000637329 VAV3Q9UKW4 847 aa17.26■□□□□ 0.35
CLN6-219ENST00000637329 LRRC37A2A6NM11 1700 aa17.25■□□□□ 0.35
CLN6-219ENST00000637329 MANSC4A6NHS7 340 aaPredicted RBP17.25■□□□□ 0.35
CLN6-219ENST00000637329 PLCG1P19174 1290 aa17.25■□□□□ 0.35
CLN6-219ENST00000637329 EIF2AK2P19525 551 aaKnown RBP17.25■□□□□ 0.35
CLN6-219ENST00000637329 CDC25AP30304 524 aa17.25■□□□□ 0.35
CLN6-219ENST00000637329 ERVK-9P63128 1117 aa17.25■□□□□ 0.35
CLN6-219ENST00000637329 ERVK-24P63145 666 aa17.25■□□□□ 0.35
CLN6-219ENST00000637329 UBXN2AP68543 259 aa17.25■□□□□ 0.35
CLN6-219ENST00000637329 CCNA1P78396 465 aa17.25■□□□□ 0.35
CLN6-219ENST00000637329 PPP2R5CQ13362 524 aa17.25■□□□□ 0.35
CLN6-219ENST00000637329 PNOCQ13519 176 aa17.25■□□□□ 0.35
CLN6-219ENST00000637329 TMEM119Q4V9L6 283 aa17.25■□□□□ 0.35
CLN6-219ENST00000637329 SAPCD2Q86UD0 394 aa17.25■□□□□ 0.35
CLN6-219ENST00000637329 ANKRD35Q8N283 1001 aa17.25■□□□□ 0.35
CLN6-219ENST00000637329 IL31RAQ8NI17 732 aa17.25■□□□□ 0.35
CLN6-219ENST00000637329 SMCR8Q8TEV9 937 aaPredicted RBP17.25■□□□□ 0.35
CLN6-219ENST00000637329 PAGE5Q96GU1 130 aa17.25■□□□□ 0.35
CLN6-219ENST00000637329 IWS1Q96ST2 819 aa17.25■□□□□ 0.35
CLN6-219ENST00000637329 JADE2Q9NQC1 790 aa17.25■□□□□ 0.35
CLN6-219ENST00000637329 MORF4L1Q9UBU8 362 aa17.25■□□□□ 0.35
CLN6-219ENST00000637329 CASP8AP2Q9UKL3 1982 aa17.24■□□□□ 0.35
CLN6-219ENST00000637329 LOC102724159A0A0B4J2E5 919 aa17.24■□□□□ 0.35
CLN6-219ENST00000637329 MAFGO15525 162 aa17.24■□□□□ 0.35
CLN6-219ENST00000637329 GTPBP6O43824 516 aaPredicted RBP17.24■□□□□ 0.35
CLN6-219ENST00000637329 AOC2O75106 756 aa17.24■□□□□ 0.35
CLN6-219ENST00000637329 PSMD10O75832 226 aa17.24■□□□□ 0.35
CLN6-219ENST00000637329 ITGB5P18084 799 aa17.24■□□□□ 0.35
CLN6-219ENST00000637329 MRPS9P82933 396 aaKnown RBP17.24■□□□□ 0.35
CLN6-219ENST00000637329 MTMR1Q13613 665 aa17.24■□□□□ 0.35
CLN6-219ENST00000637329 PWP2Q15269 919 aaKnown RBP17.24■□□□□ 0.35
CLN6-219ENST00000637329 ANO6Q4KMQ2 910 aa17.24■□□□□ 0.35
CLN6-219ENST00000637329 NAALADL2Q58DX5 795 aa17.24■□□□□ 0.35
CLN6-219ENST00000637329 LRCH2Q5VUJ6 765 aa17.24■□□□□ 0.35
CLN6-219ENST00000637329 NCAPG2Q86XI2 1143 aa17.24■□□□□ 0.35
CLN6-219ENST00000637329 SMARCE1Q969G3 411 aa17.24■□□□□ 0.35
CLN6-219ENST00000637329 GPRASP2Q96D09 838 aa17.24■□□□□ 0.35
CLN6-219ENST00000637329 HHIPL1Q96JK4 782 aa17.24■□□□□ 0.35
CLN6-219ENST00000637329 ZNF577Q9BSK1 485 aa17.24■□□□□ 0.35
CLN6-219ENST00000637329 PANK2Q9BZ23 570 aa17.24■□□□□ 0.35
CLN6-219ENST00000637329 NAT10Q9H0A0 1025 aaKnown RBP17.24■□□□□ 0.35
CLN6-219ENST00000637329 RBSNQ9H1K0 784 aa17.24■□□□□ 0.35
CLN6-219ENST00000637329 ADD3Q9UEY8 706 aaKnown RBP17.24■□□□□ 0.35
CLN6-219ENST00000637329 B4DLN1 442 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 IPO5O00410 1097 aaKnown RBP17.23■□□□□ 0.35
CLN6-219ENST00000637329 GAS7O60861 476 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 SLC10A3P09131 477 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 ERCC3P19447 782 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 MUTP22033 750 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 SARSP49591 514 aaKnown RBP17.23■□□□□ 0.35
CLN6-219ENST00000637329 ZNF157P51786 506 aaPredicted RBP17.23■□□□□ 0.35
CLN6-219ENST00000637329 NLRP12P59046 1061 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 DPYDQ12882 1025 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 GRB10Q13322 594 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 RGMBQ6NW40 437 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms