RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 TSGA10Q9BZW7 698 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 FAM53CQ9NYF3 392 aa13.47□□□□□ -0.25
CLN8-212ENST00000637083 MMP14P50281 582 aa13.46□□□□□ -0.25
CLN8-212ENST00000637083 COASYQ13057 564 aa13.46□□□□□ -0.25
CLN8-212ENST00000637083 EZH2Q15910 746 aaKnown RBP13.46□□□□□ -0.25
CLN8-212ENST00000637083 WDR59Q6PJI9 974 aa13.46□□□□□ -0.25
CLN8-212ENST00000637083 DNAJC19Q96DA6 116 aa13.46□□□□□ -0.25
CLN8-212ENST00000637083 CEP63Q96MT8 703 aa13.46□□□□□ -0.25
CLN8-212ENST00000637083 NUDT12Q9BQG2 462 aa13.46□□□□□ -0.25
CLN8-212ENST00000637083 NUCKS1Q9H1E3 243 aaKnown RBP13.46□□□□□ -0.25
CLN8-212ENST00000637083 ARHGEF10LQ9HCE6 1279 aa13.46□□□□□ -0.25
CLN8-212ENST00000637083 HDAC9Q9UKV0 1011 aa13.46□□□□□ -0.25
CLN8-212ENST00000637083 FAM196BA6NMK8 535 aa13.46□□□□□ -0.26
CLN8-212ENST00000637083 MEIS2O14770 477 aa13.46□□□□□ -0.26
CLN8-212ENST00000637083 NDUFB10O96000 172 aa13.46□□□□□ -0.26
CLN8-212ENST00000637083 PLA2G4BP0C869 781 aa13.46□□□□□ -0.26
CLN8-212ENST00000637083 HNRNPH3P31942 346 aaKnown RBP13.46□□□□□ -0.26
CLN8-212ENST00000637083 ARHGAP4P98171 946 aa13.46□□□□□ -0.26
CLN8-212ENST00000637083 EN1Q05925 392 aaPredicted RBP13.46□□□□□ -0.26
CLN8-212ENST00000637083 SPA17Q15506 151 aa13.46□□□□□ -0.26
CLN8-212ENST00000637083 CCDC122Q5T0U0 273 aa13.46□□□□□ -0.26
CLN8-212ENST00000637083 PPP4R3CPQ6ZMV5 832 aa13.46□□□□□ -0.26
CLN8-212ENST00000637083 CAMKK2Q96RR4 588 aa13.46□□□□□ -0.26
CLN8-212ENST00000637083 TDRD3Q9H7E2 651 aaKnown RBP13.46□□□□□ -0.26
CLN8-212ENST00000637083 NHEJ1Q9H9Q4 299 aaPredicted RBP13.46□□□□□ -0.26
CLN8-212ENST00000637083 KIAA1024Q9UPX6 916 aa13.46□□□□□ -0.26
CLN8-212ENST00000637083 SIPA1L1O43166 1804 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 RGPD3A6NKT7 1758 aaPredicted RBP13.45□□□□□ -0.26
CLN8-212ENST00000637083 RGPD4Q7Z3J3 1758 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 CTAGE15A4D2H0 777 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 PSMD14O00487 310 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 PPIP5K2O43314 1243 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 USO1O60763 962 aaKnown RBP13.45□□□□□ -0.26
CLN8-212ENST00000637083 SSBP05455 408 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLN8-212ENST00000637083 KRT18P05783 430 aaKnown RBP13.45□□□□□ -0.26
CLN8-212ENST00000637083 CTAGE8P0CG41 777 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 FAM193AP78312 1265 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 BRD3Q15059 726 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 SHROOM1Q2M3G4 852 aaPredicted RBP13.45□□□□□ -0.26
CLN8-212ENST00000637083 KCNK18Q7Z418 384 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 CTAGE6Q86UF2 777 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 SIAH1Q8IUQ4 282 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 CTAGE4Q8IX94 777 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 HPS3Q969F9 1004 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 CCDC42Q96M95 316 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 CSRNP1Q96S65 589 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 AGPAT5Q9NUQ2 364 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 GUCA1BQ9UMX6 200 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 PLAGL2Q9UPG8 496 aa13.45□□□□□ -0.26
CLN8-212ENST00000637083 GDF11O95390 407 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 SREBF1P36956 1147 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 CRYGNQ8WXF5 182 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 JAKMIP2Q96AA8 810 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 EHMT1Q9H9B1 1298 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.44□□□□□ -0.263e-6■■■■■ 29.3
CLN8-212ENST00000637083 ARFGAP3Q9NP61 516 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 MYO6Q9UM54 1294 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 DNM3Q9UQ16 869 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 COL4A3BPQ9Y5P4 624 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 CCDC151A5D8V7 595 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 TRAF5O00463 557 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 ERLIN1O75477 346 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 GH2P01242 217 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 CIITAP33076 1130 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 KIF5AQ12840 1032 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 ECM1Q16610 540 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 CCDC40Q4G0X9 1142 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 LRRC55Q6ZSA7 311 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 GPBP1Q86WP2 473 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 NEK11Q8NG66 645 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 RPGRIP1Q96KN7 1286 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 GOPCQ9HD26 462 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 ZNF446Q9NWS9 450 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 STK32BQ9NY57 414 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 FAM184BQ9ULE4 1060 aa13.44□□□□□ -0.26
CLN8-212ENST00000637083 E9PMD0 336 aa13.43□□□□□ -0.26
CLN8-212ENST00000637083 PIK3CDO00329 1044 aa13.43□□□□□ -0.26
CLN8-212ENST00000637083 ZRANB2O95218 330 aaKnown RBP eCLIP13.43□□□□□ -0.26
CLN8-212ENST00000637083 CYP3A4P08684 503 aa13.43□□□□□ -0.26
CLN8-212ENST00000637083 RPA1P27694 616 aa13.43□□□□□ -0.26
CLN8-212ENST00000637083 ZNF76P36508 570 aa13.43□□□□□ -0.26
CLN8-212ENST00000637083 PRR16Q569H4 304 aa13.43□□□□□ -0.26
CLN8-212ENST00000637083 HERC4Q5GLZ8 1057 aaPredicted RBP13.43□□□□□ -0.26
CLN8-212ENST00000637083 UTP14CQ5TAP6 766 aaKnown RBP13.43□□□□□ -0.26
CLN8-212ENST00000637083 RTKN2Q8IZC4 609 aa13.43□□□□□ -0.26
CLN8-212ENST00000637083 ETNPPLQ8TBG4 499 aa13.43□□□□□ -0.26
CLN8-212ENST00000637083 PARD6BQ9BYG5 372 aa13.43□□□□□ -0.26
CLN8-212ENST00000637083 TANGO6Q9C0B7 1094 aa13.43□□□□□ -0.26
CLN8-212ENST00000637083 GBP3Q9H0R5 595 aa13.43□□□□□ -0.26
CLN8-212ENST00000637083 SH2D4AQ9H788 454 aa13.43□□□□□ -0.26
CLN8-212ENST00000637083 MMRN2Q9H8L6 949 aa13.43□□□□□ -0.26
CLN8-212ENST00000637083 SIK3Q9Y2K2 1263 aa13.43□□□□□ -0.26
CLN8-212ENST00000637083 REXO2Q9Y3B8 237 aaKnown RBP13.43□□□□□ -0.26
CLN8-212ENST00000637083 MYH7BA7E2Y1 1941 aa13.43□□□□□ -0.26
CLN8-212ENST00000637083 SLX4Q8IY92 1834 aa13.43□□□□□ -0.26
CLN8-212ENST00000637083 A0A0U1RQJ8 604 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 POTEB3A0JP26 581 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 ANO9A1A5B4 782 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 RASSF10A6NK89 507 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 YDJCA8MPS7 323 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms