RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 ARHGAP4P98171 946 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 BEX3Q00994 111 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 MTMR1Q13613 665 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 DGKDQ16760 1214 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 CEP55Q53EZ4 464 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 CELF3Q5SZQ8 465 aaKnown RBP9.37□□□□□ -0.91
PNKP-226ENST00000636840 KRT25Q7Z3Z0 450 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 NSUN7Q8NE18 718 aaKnown RBP9.37□□□□□ -0.91
PNKP-226ENST00000636840 DIS3LQ8TF46 1054 aaKnown RBP9.37□□□□□ -0.91
PNKP-226ENST00000636840 SPATA33Q96N06 139 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 NAP1L4Q99733 375 aaKnown RBP9.37□□□□□ -0.91
PNKP-226ENST00000636840 MXRA8Q9BRK3 442 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 MTG1Q9BT17 334 aaPredicted RBP9.37□□□□□ -0.91
PNKP-226ENST00000636840 JADE2Q9NQC1 790 aa9.37□□□□□ -0.91
PNKP-226ENST00000636840 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.37□□□□□ -0.91
PNKP-226ENST00000636840 MROH7Q68CQ1 1323 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 A0A0U1RQG5 324 aaPredicted RBP9.36□□□□□ -0.91
PNKP-226ENST00000636840 A0A1W2PQ45 241 aaPredicted RBP9.36□□□□□ -0.91
PNKP-226ENST00000636840 A0A1W2PQY0 241 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 LARGE1O95461 756 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 CTDNEP1O95476 244 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 CYP3A4P08684 503 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 MNX1P50219 401 aaPredicted RBP9.36□□□□□ -0.91
PNKP-226ENST00000636840 GNL2Q13823 731 aaKnown RBP9.36□□□□□ -0.91
PNKP-226ENST00000636840 NONOQ15233 471 aaKnown RBP eCLIP9.36□□□□□ -0.91
PNKP-226ENST00000636840 C1orf53Q5VUE5 145 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 MYSM1Q5VVJ2 828 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 NIPA1Q7RTP0 329 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 PLA2G4DQ86XP0 818 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 DAGLBQ8NCG7 672 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 IL31RAQ8NI17 732 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 AFG1LQ8WV93 481 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 COPS5Q92905 334 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 TNPO1Q92973 898 aaKnown RBP9.36□□□□□ -0.91
PNKP-226ENST00000636840 EMID1Q96A84 441 aaPredicted RBP9.36□□□□□ -0.91
PNKP-226ENST00000636840 LENG1Q96BZ8 264 aaPredicted RBP9.36□□□□□ -0.91
PNKP-226ENST00000636840 ZFP91Q96JP5 570 aaPredicted RBP9.36□□□□□ -0.91
PNKP-226ENST00000636840 C8orf76Q96K31 380 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 SDF4Q9BRK5 362 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 PHF20Q9BVI0 1012 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 KATNAL1Q9BW62 490 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 TMEM260Q9NX78 707 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 ATP11BQ9Y2G3 1177 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 UBIAD1Q9Y5Z9 338 aa9.36□□□□□ -0.91
PNKP-226ENST00000636840 RBBP6Q7Z6E9 1792 aaKnown RBP9.36□□□□□ -0.91
PNKP-226ENST00000636840 ARVCFO00192 962 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 MEIS1O00470 390 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 ADCY6O43306 1168 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 MARCH6O60337 910 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 RGS20O76081 388 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 ARIH2O95376 493 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 SUPT20HL2P0C7V6 817 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 KRT2P35908 639 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 RTP1P59025 263 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 SETQ01105 290 aaPredicted RBP9.35□□□□□ -0.91
PNKP-226ENST00000636840 ITGA7Q13683 1181 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 PDE4DIPQ5VU43 2346 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 CCSAPQ6IQ19 270 aaPredicted RBP9.35□□□□□ -0.91
PNKP-226ENST00000636840 METTL7BQ6UX53 244 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 CXCL17Q6UXB2 119 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 CYFIP1Q7L576 1253 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 PPTC7Q8NI37 304 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 TBCKQ8TEA7 893 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 SEPT1Q8WYJ6 367 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 TMX3Q96JJ7 454 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 PGBD1Q96JS3 809 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 TOX2Q96NM4 488 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 AIFM3Q96NN9 605 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 TBC1D22BQ9NU19 505 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 KCNJ14Q9UNX9 436 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 SMC3Q9UQE7 1217 aa9.35□□□□□ -0.91
PNKP-226ENST00000636840 MYADML2A6NDP7 307 aa9.34□□□□□ -0.91
PNKP-226ENST00000636840 JAK2O60674 1132 aa9.34□□□□□ -0.91
PNKP-226ENST00000636840 BAG4O95429 457 aaKnown RBP9.34□□□□□ -0.91
PNKP-226ENST00000636840 MMP3P08254 477 aa9.34□□□□□ -0.91
PNKP-226ENST00000636840 FDPSP14324 419 aaKnown RBP9.34□□□□□ -0.91
PNKP-226ENST00000636840 ITGB5P18084 799 aa9.34□□□□□ -0.91
PNKP-226ENST00000636840 UBA1P22314 1058 aaKnown RBP9.34□□□□□ -0.91
PNKP-226ENST00000636840 CIITAP33076 1130 aa9.34□□□□□ -0.91
PNKP-226ENST00000636840 CHMP4BP1P59074 171 aa9.34□□□□□ -0.91
PNKP-226ENST00000636840 PTPN11Q06124 597 aaPredicted RBP9.34□□□□□ -0.91
PNKP-226ENST00000636840 ARHGAP1Q07960 439 aa9.34□□□□□ -0.91
PNKP-226ENST00000636840 LRRC26Q2I0M4 334 aa9.34□□□□□ -0.91
PNKP-226ENST00000636840 TMEM63BQ5T3F8 832 aa9.34□□□□□ -0.91
PNKP-226ENST00000636840 KRT40Q6A162 431 aa9.34□□□□□ -0.91
PNKP-226ENST00000636840 C7orf61Q8IZ16 206 aa9.34□□□□□ -0.91
PNKP-226ENST00000636840 RASGRP4Q8TDF6 673 aa9.34□□□□□ -0.91
PNKP-226ENST00000636840 LBHD1Q9BQE6 289 aaPredicted RBP9.34□□□□□ -0.91
PNKP-226ENST00000636840 ZNF577Q9BSK1 485 aa9.34□□□□□ -0.91
PNKP-226ENST00000636840 KCNH7Q9NS40 1196 aa9.34□□□□□ -0.91
PNKP-226ENST00000636840 NFASCO94856 1347 aa9.33□□□□□ -0.92
PNKP-226ENST00000636840 H3BQV1 296 aa9.33□□□□□ -0.92
PNKP-226ENST00000636840 CTAGE5O15320 804 aa9.33□□□□□ -0.92
PNKP-226ENST00000636840 SORBS3O60504 671 aa9.33□□□□□ -0.92
PNKP-226ENST00000636840 MMP1P03956 469 aa9.33□□□□□ -0.92
PNKP-226ENST00000636840 GCFC2P16383 781 aaKnown RBP9.33□□□□□ -0.92
PNKP-226ENST00000636840 IRX5P78411 483 aaPredicted RBP9.33□□□□□ -0.92
PNKP-226ENST00000636840 PURAQ00577 322 aaKnown RBP9.33□□□□□ -0.92
PNKP-226ENST00000636840 SP2Q02086 613 aa9.33□□□□□ -0.92
PNKP-226ENST00000636840 TLE2Q04725 743 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms