RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 RPA1P27694 616 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 SCNN1DP51172 638 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 FMR1Q06787 632 aaKnown RBP eCLIP5.02□□□□□ -1.61
SCN1A-210ENST00000635776 KLHL30Q0D2K2 578 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 FRMD5Q7Z6J6 570 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 SLC44A5Q8NCS7 719 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 VEZTQ9HBM0 779 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 ZNF831Q5JPB2 1677 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 EEF2P13639 858 aaKnown RBP5.02□□□□□ -1.61
SCN1A-210ENST00000635776 SFNP31947 248 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 JAK3P52333 1124 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 TKFCQ3LXA3 575 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 DYMQ7RTS9 669 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 GRAMD1CQ8IYS0 662 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 DNAJC7Q99615 494 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 TYW1Q9NV66 732 aaKnown RBP5.02□□□□□ -1.61
SCN1A-210ENST00000635776 EIF3DO15371 548 aaKnown RBP eCLIP5.02□□□□□ -1.613e-6■■□□□ 11.9
SCN1A-210ENST00000635776 SERPING1P05155 500 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 IVLP07476 585 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 AOC3Q16853 763 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 CENPPQ6IPU0 288 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 CEP128Q6ZU80 1094 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 STAMQ92783 540 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 PSMD1Q99460 953 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 LCMT1Q9UIC8 334 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 TJP1Q07157 1748 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 STRCQ7RTU9 1775 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 ABCA3Q99758 1704 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 KIAA0391O15091 583 aaKnown RBP5.02□□□□□ -1.61
SCN1A-210ENST00000635776 DESP17661 470 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 PSMC2P35998 433 aaKnown RBP5.02□□□□□ -1.61
SCN1A-210ENST00000635776 BTNL9Q6UXG8 535 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 COA7Q96BR5 231 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 GDAQ9Y2T3 454 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 AFPP02771 609 aaKnown RBP5.02□□□□□ -1.61
SCN1A-210ENST00000635776 CYP3A4P08684 503 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 HSPA6P17066 643 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 COL9A3Q14050 684 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-210ENST00000635776 SLC15A2Q16348 729 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 DBNDD1Q9H9R9 158 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 ZNRF3Q9ULT6 936 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 WDR46O15213 610 aaKnown RBP5.02□□□□□ -1.61
SCN1A-210ENST00000635776 PRLRP16471 622 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 STAT1P42224 750 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 MAP3K9P80192 1104 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 DDR1Q08345 913 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 MIER3Q7Z3K6 550 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 HVCN1Q96D96 273 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 DRC1Q96MC2 740 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 SLF1Q9BQI6 1058 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 PICK1Q9NRD5 415 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 CFBP00751 764 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 NF2P35240 595 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 KRT76Q01546 638 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 ELF2Q15723 593 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 HYIQ5T013 277 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 CIAPIN1Q6FI81 312 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 PRPF38AQ8NAV1 312 aaKnown RBP5.02□□□□□ -1.61
SCN1A-210ENST00000635776 MAIP1Q8WWC4 291 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 KIFAP3Q92845 792 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 ATP6V0A1Q93050 837 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 MTMR9Q96QG7 549 aa5.02□□□□□ -1.61
SCN1A-210ENST00000635776 CYP3A7-CYP3A51PA0A087WV96 503 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 P4HA2O15460 535 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 CYP3A7P24462 503 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 CIITAP33076 1130 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 COPB2P35606 906 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 NCBP1Q09161 790 aaKnown RBP5.01□□□□□ -1.61
SCN1A-210ENST00000635776 PPP2R5AQ15172 486 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 LRCH2Q5VUJ6 765 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 USP49Q70CQ1 688 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 HNRNPLLQ8WVV9 542 aaKnown RBP5.01□□□□□ -1.61
SCN1A-210ENST00000635776 DPF2Q92785 391 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 RUNDC3BQ96NL0 473 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.01□□□□□ -1.61
SCN1A-210ENST00000635776 ZSWIM4Q9H7M6 989 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 SLC39A2Q9NP94 309 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 TMOD4Q9NZQ9 345 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 TBC1D7Q9P0N9 293 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 MRFAP1Q9Y605 127 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 PSMD14O00487 310 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 FECHP22830 423 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 SREBF1P36956 1147 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 RAPGEF1Q13905 1077 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 MCM6Q14566 821 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 PLIN2Q99541 437 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 MRPL44Q9H9J2 332 aaKnown RBP5.01□□□□□ -1.61
SCN1A-210ENST00000635776 PARVGQ9HBI0 331 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 PIM2Q9P1W9 311 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 PIK3CDO00329 1044 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 FOXN1O15353 648 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 TBC1D12O60347 775 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 RSBN1LQ6PCB5 846 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-210ENST00000635776 NIPA1Q7RTP0 329 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 IFT20Q8IY31 132 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 MSL3Q8N5Y2 521 aaKnown RBP5.01□□□□□ -1.61
SCN1A-210ENST00000635776 DOT1LQ8TEK3 1739 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 IGKV6D-41A0A0C4DH26 115 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 FAM205CA6NFA0 338 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 CLSTN1O94985 981 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms