RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 PUS7LQ9H0K6 701 aaKnown RBP12.65□□□□□ -0.38
COL11A1-211ENST00000635193 TRPC6Q9Y210 931 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 MYO1FO00160 1098 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 GRAMD4Q6IC98 578 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 NSMFQ6X4W1 530 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 DYDC2Q96IM9 177 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 STOML1Q9UBI4 398 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 ARHGEF5Q12774 1597 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 ATP10AO60312 1499 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 ESRRAP11474 423 aaPredicted RBP12.65□□□□□ -0.38
COL11A1-211ENST00000635193 SGO2Q562F6 1265 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 TRIML2Q8N7C3 387 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 PPWD1Q96BP3 646 aaKnown RBP12.65□□□□□ -0.38
COL11A1-211ENST00000635193 CCDC127Q96BQ5 260 aa12.65□□□□□ -0.38
COL11A1-211ENST00000635193 SASH1O94885 1247 aa12.65□□□□□ -0.39
COL11A1-211ENST00000635193 MMEP08473 750 aa12.65□□□□□ -0.39
COL11A1-211ENST00000635193 HSPA6P17066 643 aa12.65□□□□□ -0.39
COL11A1-211ENST00000635193 YWHAGP61981 247 aaKnown RBP eCLIP12.65□□□□□ -0.39
COL11A1-211ENST00000635193 ASPHQ12797 758 aa12.65□□□□□ -0.39
COL11A1-211ENST00000635193 GLE1Q53GS7 698 aaKnown RBP12.65□□□□□ -0.39
COL11A1-211ENST00000635193 LCA5Q86VQ0 697 aa12.65□□□□□ -0.39
COL11A1-211ENST00000635193 CCDC24Q8N4L8 307 aa12.65□□□□□ -0.39
COL11A1-211ENST00000635193 NDST4Q9H3R1 872 aa12.65□□□□□ -0.39
COL11A1-211ENST00000635193 ABHD10Q9NUJ1 306 aa12.65□□□□□ -0.39
COL11A1-211ENST00000635193 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.65□□□□□ -0.39
COL11A1-211ENST00000635193 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.65□□□□□ -0.39
COL11A1-211ENST00000635193 PRDM15P57071 1507 aaPredicted RBP12.64□□□□□ -0.39
COL11A1-211ENST00000635193 RASSF10A6NK89 507 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 SRGAP2O75044 1071 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 INHBAP08476 426 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 CYP4A11Q02928 519 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 DPP8Q6V1X1 898 aaPredicted RBP12.64□□□□□ -0.39
COL11A1-211ENST00000635193 CCDC125Q86Z20 511 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 FMR1NBQ8N0W7 255 aaPredicted RBP12.64□□□□□ -0.39
COL11A1-211ENST00000635193 AP1M1Q9BXS5 423 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 ZMYND12Q9H0C1 365 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 DLATP10515 647 aaKnown RBP12.64□□□□□ -0.39
COL11A1-211ENST00000635193 EEF1DP29692 281 aaKnown RBP12.64□□□□□ -0.39
COL11A1-211ENST00000635193 ELF1P32519 619 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 MRPS25P82663 173 aaKnown RBP12.64□□□□□ -0.39
COL11A1-211ENST00000635193 SNX1Q13596 522 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 OSBPL1AQ9BXW6 950 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 STK17AQ9UEE5 414 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 ANAPC5Q9UJX4 755 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 PSMC2P35998 433 aaKnown RBP12.64□□□□□ -0.39
COL11A1-211ENST00000635193 MFAP3P55082 362 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 DR1Q01658 176 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 CHRNDQ07001 517 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 C6orf118Q5T5N4 469 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 CYP4F22Q6NT55 531 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 SCYL2Q6P3W7 929 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 ARHGAP18Q8N392 663 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 DEPTORQ8TB45 409 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 KCNV2Q8TDN2 545 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 EPC1Q9H2F5 836 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 PACSIN2Q9UNF0 486 aaPredicted RBP12.64□□□□□ -0.39
COL11A1-211ENST00000635193 IGSF1Q8N6C5 1336 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 MLH3Q9UHC1 1453 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 NOP56O00567 594 aaKnown RBP12.64□□□□□ -0.39
COL11A1-211ENST00000635193 PRPF3O43395 683 aaKnown RBP12.64□□□□□ -0.39
COL11A1-211ENST00000635193 LIG4P49917 911 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 GRAMD1BQ3KR37 738 aa12.64□□□□□ -0.39
COL11A1-211ENST00000635193 DHX40Q8IX18 779 aaKnown RBP12.64□□□□□ -0.39
COL11A1-211ENST00000635193 SOS2Q07890 1332 aaPredicted RBP12.63□□□□□ -0.39
COL11A1-211ENST00000635193 GMNCA6NCL1 334 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 ZBED4O75132 1171 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 DCTN3O75935 186 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 P4HA1P13674 534 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 INPP1P49441 399 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 ADCY2Q08462 1091 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 NLRP14Q86W24 1093 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 ZNF653Q96CK0 615 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 FGD4Q96M96 766 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 CYTH2Q99418 400 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 EFHD1Q9BUP0 239 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 EIF2AQ9BY44 585 aaKnown RBP12.63□□□□□ -0.39
COL11A1-211ENST00000635193 CCDC68Q9H2F9 335 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 AZI2Q9H6S1 392 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 USP40Q9NVE5 1235 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 ZSWIM5Q9P217 1185 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 TTLL3Q9Y4R7 772 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 HSPA2P54652 639 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 AOC3Q16853 763 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 JADE1Q6IE81 842 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 NLRX1Q86UT6 975 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 VTI1AQ96AJ9 217 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 TBK1Q9UHD2 729 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 SPAG7O75391 227 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 ATP5HO75947 161 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 GFPT2O94808 682 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 LIFRP42702 1097 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 PTPN12Q05209 780 aaKnown RBP12.63□□□□□ -0.39
COL11A1-211ENST00000635193 PABPC4Q13310 644 aaKnown RBP eCLIP12.63□□□□□ -0.39
COL11A1-211ENST00000635193 MFSD14BQ5SR56 506 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 ODR4Q5SWX8 454 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 FAM186BQ8IYM0 893 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 ATP7BP35670 1465 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 MAPK4P31152 587 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 PTK2Q05397 1052 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 ZC4H2Q9NQZ6 224 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms