RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 SLC12A2P55011 1212 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 EVCP57679 992 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 CDC16Q13042 620 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 CAMK2GQ13555 558 aaPredicted RBP5.49□□□□□ -1.53
SDCBP-213ENST00000630925 RASA2Q15283 850 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 MAP3K11Q16584 847 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 FAM209AQ5JX71 171 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 SNAP47Q5SQN1 464 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 C10orf76Q5T2E6 689 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 KAZNQ674X7 775 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 DSTYKQ6XUX3 929 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 KDELC2Q7Z4H8 507 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 SRGAP1Q7Z6B7 1085 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 OR2C3Q8N628 320 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 ESX1Q8N693 406 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 RBBP8NLQ8NC74 664 aaPredicted RBP5.49□□□□□ -1.53
SDCBP-213ENST00000630925 ZNF540Q8NDQ6 660 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 GPKOWQ92917 476 aaPredicted RBP eCLIP5.49□□□□□ -1.531e-6■□□□□ 11.3
SDCBP-213ENST00000630925 FERMT2Q96AC1 680 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 TBCBQ99426 244 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 MRPL4Q9BYD3 311 aaKnown RBP5.49□□□□□ -1.53
SDCBP-213ENST00000630925 ITM2CQ9NQX7 267 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 GPRC5BQ9NZH0 403 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 PLA2G2EQ9NZK7 142 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 EIF2B4Q9UI10 523 aaKnown RBP5.49□□□□□ -1.53
SDCBP-213ENST00000630925 TMEM94Q12767 1356 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 FANCAO15360 1455 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 SYNJ2BP-COX16A0A087WUM0 186 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 PI4K2BG5E9Z4 385 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 CLASP2O75122 1294 aaKnown RBP5.49□□□□□ -1.53
SDCBP-213ENST00000630925 HRGP04196 525 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 GSTT1P30711 240 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 PPP2R3AQ06190 1150 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 ACAP1Q15027 740 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 DGKKQ5KSL6 1271 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 CFAP58Q5T655 872 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 FAM47EQ6ZV65 393 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 RAPH1Q70E73 1250 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 SLC9B2Q86UD5 537 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 RNF168Q8IYW5 571 aaPredicted RBP5.49□□□□□ -1.53
SDCBP-213ENST00000630925 TBC1D21Q8IYX1 336 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 LRRC47Q8N1G4 583 aaKnown RBP5.49□□□□□ -1.53
SDCBP-213ENST00000630925 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.49□□□□□ -1.53
SDCBP-213ENST00000630925 FBXO27Q8NI29 283 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 ARHGEF2Q92974 986 aaKnown RBP5.49□□□□□ -1.53
SDCBP-213ENST00000630925 L3MBTL2Q969R5 705 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 PPP1R16BQ96T49 567 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 EHMT1Q9H9B1 1298 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 ARFGAP3Q9NP61 516 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 FOXD3Q9UJU5 478 aaPredicted RBP5.49□□□□□ -1.53
SDCBP-213ENST00000630925 DUSP12Q9UNI6 340 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 APOBEC2Q9Y235 224 aaKnown RBP5.49□□□□□ -1.53
SDCBP-213ENST00000630925 CEP83Q9Y592 693 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 PARP3Q9Y6F1 533 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 POGZQ7Z3K3 1410 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 KLHL33A6NCF5 533 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 NBPF26B4DH59 902 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 B4DLN1 442 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 PPP1R12BO60237 982 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-213ENST00000630925 ZEB2O60315 1214 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 TGDSO95455 350 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 TBC1D8O95759 1140 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 MMEP08473 750 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 MYBP10242 640 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 ALAS1P13196 640 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 VEGFAP15692 232 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-213ENST00000630925 ADH7P40394 386 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 CLCN2P51788 898 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 AKAP17AQ02040 695 aaKnown RBP5.48□□□□□ -1.53
SDCBP-213ENST00000630925 KRTCAP3Q53RY4 240 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 MUM1L1Q5H9M0 696 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 ZNF362Q5T0B9 420 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-213ENST00000630925 EP400NLQ6ZTU2 488 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 ANKRD52Q8NB46 1076 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 FAM156AQ8NDB6 213 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 ASB12Q8WXK4 309 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 CNDP2Q96KP4 475 aaKnown RBP5.48□□□□□ -1.53
SDCBP-213ENST00000630925 RIPOR3Q96MK2 946 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 VPS11Q9H270 941 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 TRIT1Q9H3H1 467 aaKnown RBP5.48□□□□□ -1.53
SDCBP-213ENST00000630925 ZWILCHQ9H900 591 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 TRIM39Q9HCM9 518 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 ZNF232Q9UNY5 417 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 C19orf53Q9UNZ5 99 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-213ENST00000630925 POLHQ9Y253 713 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 PCDHGB6Q9Y5F9 930 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 SETBP1Q9Y6X0 1596 aa5.48□□□□□ -1.53
SDCBP-213ENST00000630925 A0A087WV62 115 aa5.47□□□□□ -1.53
SDCBP-213ENST00000630925 LINC00854A0A1B0GVQ3 168 aa5.47□□□□□ -1.53
SDCBP-213ENST00000630925 A0A1W2PQH9 124 aa5.47□□□□□ -1.53
SDCBP-213ENST00000630925 USO1O60763 962 aaKnown RBP5.47□□□□□ -1.53
SDCBP-213ENST00000630925 PQBP1O60828 265 aaKnown RBP5.47□□□□□ -1.53
SDCBP-213ENST00000630925 PAPLNO95428 1278 aa5.47□□□□□ -1.53
SDCBP-213ENST00000630925 POU2F2P09086 479 aa5.47□□□□□ -1.53
SDCBP-213ENST00000630925 DHRS4L1P0CG22 281 aa5.47□□□□□ -1.53
SDCBP-213ENST00000630925 PYGMP11217 842 aa5.47□□□□□ -1.53
SDCBP-213ENST00000630925 RLBP1P12271 317 aa5.47□□□□□ -1.53
SDCBP-213ENST00000630925 HOXA10P31260 410 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-213ENST00000630925 ATP6V1AP38606 617 aa5.47□□□□□ -1.53
SDCBP-213ENST00000630925 PMS1P54277 932 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms