RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 RPUSD2Q8IZ73 545 aaKnown RBP18.28■□□□□ 0.52
CHRNA4-211ENST00000628606 GPKOWQ92917 476 aaPredicted RBP eCLIP18.28■□□□□ 0.52
CHRNA4-211ENST00000628606 NOC4LQ9BVI4 516 aaKnown RBP18.28■□□□□ 0.52
CHRNA4-211ENST00000628606 MTIF3Q9H2K0 278 aaKnown RBP18.28■□□□□ 0.52
CHRNA4-211ENST00000628606 CNTNAP5Q8WYK1 1306 aa18.27■□□□□ 0.52
CHRNA4-211ENST00000628606 hCG_1984214I3L0E3 225 aa18.27■□□□□ 0.52
CHRNA4-211ENST00000628606 FIBPO43427 364 aa18.27■□□□□ 0.52
CHRNA4-211ENST00000628606 CYP2C9P11712 490 aa18.27■□□□□ 0.52
CHRNA4-211ENST00000628606 UBA1P22314 1058 aaKnown RBP18.27■□□□□ 0.52
CHRNA4-211ENST00000628606 CCL23P55773 120 aa18.27■□□□□ 0.52
CHRNA4-211ENST00000628606 MRPS9P82933 396 aaKnown RBP18.27■□□□□ 0.52
CHRNA4-211ENST00000628606 ZNF713Q8N859 430 aaPredicted RBP18.27■□□□□ 0.52
CHRNA4-211ENST00000628606 C7orf31Q8N865 590 aa18.27■□□□□ 0.52
CHRNA4-211ENST00000628606 RETREG2Q8NC44 543 aa18.27■□□□□ 0.52
CHRNA4-211ENST00000628606 INPP4AQ96PE3 977 aaPredicted RBP18.27■□□□□ 0.52
CHRNA4-211ENST00000628606 ALG1Q9BT22 464 aa18.27■□□□□ 0.52
CHRNA4-211ENST00000628606 GLT8D2Q9H1C3 349 aa18.27■□□□□ 0.52
CHRNA4-211ENST00000628606 IL23AQ9NPF7 189 aa18.27■□□□□ 0.52
CHRNA4-211ENST00000628606 ACRP10323 421 aa18.26■□□□□ 0.51
CHRNA4-211ENST00000628606 ICAM3P32942 547 aa18.26■□□□□ 0.51
CHRNA4-211ENST00000628606 SMAD3P84022 425 aaKnown RBP18.26■□□□□ 0.51
CHRNA4-211ENST00000628606 AKAP17AQ02040 695 aaKnown RBP18.26■□□□□ 0.51
CHRNA4-211ENST00000628606 SP2Q02086 613 aa18.26■□□□□ 0.51
CHRNA4-211ENST00000628606 BFSP2Q13515 415 aa18.26■□□□□ 0.51
CHRNA4-211ENST00000628606 PTGISQ16647 500 aa18.26■□□□□ 0.51
CHRNA4-211ENST00000628606 UBE2SQ16763 222 aa18.26■□□□□ 0.51
CHRNA4-211ENST00000628606 ZNF697Q5TEC3 545 aa18.26■□□□□ 0.51
CHRNA4-211ENST00000628606 WWC2Q6AWC2 1192 aa18.26■□□□□ 0.51
CHRNA4-211ENST00000628606 PPP1R18Q6NYC8 613 aa18.26■□□□□ 0.51
CHRNA4-211ENST00000628606 TEX2Q8IWB9 1127 aa18.26■□□□□ 0.51
CHRNA4-211ENST00000628606 CCDC155Q8N6L0 562 aa18.26■□□□□ 0.51
CHRNA4-211ENST00000628606 CDHR1Q96JP9 859 aa18.26■□□□□ 0.51
CHRNA4-211ENST00000628606 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.26■□□□□ 0.51
CHRNA4-211ENST00000628606 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 SPATA31C2B4DYI2 1134 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 FGBP02675 491 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 ZNF286BP0CG31 522 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 CDC27P30260 824 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 ADD1P35611 737 aaKnown RBP18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 PSEN2P49810 448 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 ADCY7P51828 1080 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 MFSD10Q14728 455 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 KIAA0753Q2KHM9 967 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 HSDL1Q3SXM5 330 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 TMEM240Q5SV17 173 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 FAM109BQ6ICB4 259 aaPredicted RBP18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 ZNF365Q70YC5 407 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 RUFY3Q7L099 469 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 Q7L0L9 218 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 CYFIP1Q7L576 1253 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 FBXL16Q8N461 479 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 GIMAP8Q8ND71 665 aaPredicted RBP18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 PPP1R13LQ8WUF5 828 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 KAT2BQ92831 832 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 USP26Q9BXU7 913 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 PCDHA6Q9UN73 950 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 PCDHA8Q9Y5H6 950 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 CYP46A1Q9Y6A2 500 aa18.25■□□□□ 0.51
CHRNA4-211ENST00000628606 UMODL1Q5DID0 1318 aa18.24■□□□□ 0.51
CHRNA4-211ENST00000628606 SMCO2A6NFE2 343 aa18.24■□□□□ 0.51
CHRNA4-211ENST00000628606 FOSP01100 380 aaPredicted RBP18.24■□□□□ 0.51
CHRNA4-211ENST00000628606 FUT2Q10981 343 aa18.24■□□□□ 0.51
CHRNA4-211ENST00000628606 METTL7BQ6UX53 244 aa18.24■□□□□ 0.51
CHRNA4-211ENST00000628606 SESTD1Q86VW0 696 aa18.24■□□□□ 0.51
CHRNA4-211ENST00000628606 CCDC12Q8WUD4 166 aaPredicted RBP18.24■□□□□ 0.51
CHRNA4-211ENST00000628606 SENP7Q9BQF6 1050 aa18.24■□□□□ 0.51
CHRNA4-211ENST00000628606 RIC8AQ9NPQ8 531 aa18.24■□□□□ 0.51
CHRNA4-211ENST00000628606 FAM217BQ9NTX9 383 aaPredicted RBP18.24■□□□□ 0.51
CHRNA4-211ENST00000628606 BARHL2Q9NY43 387 aa18.24■□□□□ 0.51
CHRNA4-211ENST00000628606 PITPNM1O00562 1244 aa18.23■□□□□ 0.51
CHRNA4-211ENST00000628606 EIF5BO60841 1220 aaKnown RBP18.23■□□□□ 0.51
CHRNA4-211ENST00000628606 F2P00734 622 aa18.23■□□□□ 0.51
CHRNA4-211ENST00000628606 HOXD8P13378 290 aaPredicted RBP18.23■□□□□ 0.51
CHRNA4-211ENST00000628606 C16orf59Q7L2K0 433 aa18.23■□□□□ 0.51
CHRNA4-211ENST00000628606 GPRASP2Q96D09 838 aa18.23■□□□□ 0.51
CHRNA4-211ENST00000628606 SCLYQ96I15 445 aa18.23■□□□□ 0.51
CHRNA4-211ENST00000628606 WNT8AQ9H1J5 351 aa18.23■□□□□ 0.51
CHRNA4-211ENST00000628606 HDAC6Q9UBN7 1215 aa18.23■□□□□ 0.51
CHRNA4-211ENST00000628606 STXBP3O00186 592 aa18.22■□□□□ 0.51
CHRNA4-211ENST00000628606 MAFGO15525 162 aa18.22■□□□□ 0.51
CHRNA4-211ENST00000628606 PFKMP08237 780 aa18.22■□□□□ 0.51
CHRNA4-211ENST00000628606 SCG2P13521 617 aa18.22■□□□□ 0.51
CHRNA4-211ENST00000628606 PFKFB3Q16875 520 aaPredicted RBP18.22■□□□□ 0.51
CHRNA4-211ENST00000628606 GDF6Q6KF10 455 aaPredicted RBP18.22■□□□□ 0.51
CHRNA4-211ENST00000628606 CAGE1Q8TC20 777 aa18.22■□□□□ 0.51
CHRNA4-211ENST00000628606 AGXT2Q9BYV1 514 aa18.22■□□□□ 0.51
CHRNA4-211ENST00000628606 TM6SF1Q9BZW5 370 aa18.22■□□□□ 0.51
CHRNA4-211ENST00000628606 ZSWIM6Q9HCJ5 1215 aa18.22■□□□□ 0.51
CHRNA4-211ENST00000628606 GTF2IRD1Q9UHL9 959 aa18.22■□□□□ 0.51
CHRNA4-211ENST00000628606 TRIP12Q14669 1992 aaPredicted RBP18.21■□□□□ 0.51
CHRNA4-211ENST00000628606 H3BRB1 525 aa18.21■□□□□ 0.51
CHRNA4-211ENST00000628606 ACTN1P12814 892 aa18.21■□□□□ 0.51
CHRNA4-211ENST00000628606 RFC2P35250 354 aa18.21■□□□□ 0.51
CHRNA4-211ENST00000628606 SP4Q02446 784 aa18.21■□□□□ 0.51
CHRNA4-211ENST00000628606 SEMA3FQ13275 785 aa18.21■□□□□ 0.51
CHRNA4-211ENST00000628606 MTMR1Q13613 665 aa18.21■□□□□ 0.51
CHRNA4-211ENST00000628606 OTOP2Q7RTS6 562 aa18.21■□□□□ 0.51
CHRNA4-211ENST00000628606 DEFB128Q7Z7B8 93 aa18.21■□□□□ 0.51
CHRNA4-211ENST00000628606 HERVK_113Q902F9 699 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms