RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 SPATA20Q8TB22 786 aa9.71□□□□□ -0.86
CHD2-211ENST00000627460 CRYGNQ8WXF5 182 aa9.71□□□□□ -0.86
CHD2-211ENST00000627460 ZDHHC16Q969W1 377 aa9.71□□□□□ -0.86
CHD2-211ENST00000627460 TMEM60Q9H2L4 133 aa9.71□□□□□ -0.86
CHD2-211ENST00000627460 KCNMB3Q9NPA1 279 aa9.71□□□□□ -0.86
CHD2-211ENST00000627460 PNMA3Q9UL41 463 aa9.71□□□□□ -0.86
CHD2-211ENST00000627460 SCAF8Q9UPN6 1271 aaKnown RBP9.71□□□□□ -0.86
CHD2-211ENST00000627460 PCDHA5Q9Y5H7 936 aa9.71□□□□□ -0.86
CHD2-211ENST00000627460 A0A0G2JLL6 359 aaPredicted RBP9.7□□□□□ -0.86
CHD2-211ENST00000627460 WNT7AO00755 349 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 MAFGO15525 162 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 TDP2O95551 362 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 NUDT7P0C024 238 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 ALAS1P13196 640 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 ERCC5P28715 1186 aaPredicted RBP9.7□□□□□ -0.86
CHD2-211ENST00000627460 SARSP49591 514 aaKnown RBP9.7□□□□□ -0.86
CHD2-211ENST00000627460 IRX3P78415 501 aaPredicted RBP9.7□□□□□ -0.86
CHD2-211ENST00000627460 MDM2Q00987 491 aaPredicted RBP9.7□□□□□ -0.86
CHD2-211ENST00000627460 GRIN1Q05586 938 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 KCNB1Q14721 858 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 ARSIQ5FYB1 569 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 SPECC1Q5M775 1068 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 PRAMEF18Q5VWM3 479 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 LBX2Q6XYB7 198 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 SV2BQ7L1I2 683 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 PRRT2Q7Z6L0 340 aaPredicted RBP9.7□□□□□ -0.86
CHD2-211ENST00000627460 CPXCR1Q8N123 301 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 NEK9Q8TD19 979 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 SNX29Q8TEQ0 813 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 PAGE5Q96GU1 130 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 CDHR1Q96JP9 859 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 PPP1R9BQ96SB3 815 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 PHOX2BQ99453 314 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 DNAJC25Q9H1X3 360 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 ACAD9Q9H845 621 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 CBX8Q9HC52 389 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 FBXO28Q9NVF7 368 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 KCNH4Q9UQ05 1017 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 RBBP6Q7Z6E9 1792 aaKnown RBP9.7□□□□□ -0.86
CHD2-211ENST00000627460 PHIPQ8WWQ0 1821 aa9.7□□□□□ -0.86
CHD2-211ENST00000627460 OPLAHO14841 1288 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 PFASO15067 1338 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 ZNF536O15090 1300 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 SLC37A4O43826 429 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 KIF20AO95235 890 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 SLC25A27O95847 323 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 MYL5Q02045 173 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 DPYDQ12882 1025 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 SNAPC2Q13487 334 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 PNOCQ13519 176 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 FRMPD4Q14CM0 1322 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 CEP55Q53EZ4 464 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 PRR16Q569H4 304 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 HYIQ5T013 277 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 PCNX4Q63HM2 1172 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 SARM1Q6SZW1 724 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 RNF207Q6ZRF8 634 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.69□□□□□ -0.86
CHD2-211ENST00000627460 CCDC84Q86UT8 332 aaPredicted RBP9.69□□□□□ -0.86
CHD2-211ENST00000627460 FCHSD1Q86WN1 690 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 C2orf69Q8N8R5 385 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 ZNF454Q8N9F8 522 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 TTC13Q8NBP0 860 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 KHSRPQ92945 711 aaKnown RBP eCLIP9.69□□□□□ -0.86
CHD2-211ENST00000627460 TRERF1Q96PN7 1200 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 RIT2Q99578 217 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 PAPPA2Q9BXP8 1791 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 RAVER2Q9HCJ3 691 aaKnown RBP9.69□□□□□ -0.86
CHD2-211ENST00000627460 RNF146Q9NTX7 359 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 KBTBD4Q9NVX7 518 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.69□□□□□ -0.86
CHD2-211ENST00000627460 AGTPBP1Q9UPW5 1226 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 SLC45A1Q9Y2W3 748 aa9.69□□□□□ -0.86
CHD2-211ENST00000627460 MYH7BA7E2Y1 1941 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 RPTORQ8N122 1335 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 LOC102724159A0A0B4J2E5 919 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 PVALEFA0A1B0GWK0 134 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 ADAMTS3O15072 1205 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 CBFA2T2O43439 604 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 HOXA13P31271 388 aaPredicted RBP9.68□□□□□ -0.86
CHD2-211ENST00000627460 CLCN1P35523 988 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 STAT3P40763 770 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 SNAP25P60880 206 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 PRKG1Q13976 671 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 MORC3Q14149 939 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 KARSQ15046 597 aaKnown RBP9.68□□□□□ -0.86
CHD2-211ENST00000627460 PWP2Q15269 919 aaKnown RBP9.68□□□□□ -0.86
CHD2-211ENST00000627460 IL17AQ16552 155 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 LDLRAD1Q5T700 205 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 SNRNP48Q6IEG0 339 aaKnown RBP9.68□□□□□ -0.86
CHD2-211ENST00000627460 PDXDC2PQ6P474 469 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 CNNM4Q6P4Q7 775 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 USP49Q70CQ1 688 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 NLRX1Q86UT6 975 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 PLA2G4DQ86XP0 818 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 DNERQ8NFT8 737 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 ETNPPLQ8TBG4 499 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 NSUN6Q8TEA1 469 aaKnown RBP9.68□□□□□ -0.86
CHD2-211ENST00000627460 CLEC4DQ8WXI8 215 aa9.68□□□□□ -0.86
CHD2-211ENST00000627460 LARP4BQ92615 738 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms