RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 NELFBQ8WX92 580 aa9.5□□□□□ -0.89
CHD2-209ENST00000627185 MKL1Q969V6 931 aa9.5□□□□□ -0.89
CHD2-209ENST00000627185 RPGRIP1Q96KN7 1286 aa9.5□□□□□ -0.89
CHD2-209ENST00000627185 RAB34Q9BZG1 259 aa9.5□□□□□ -0.89
CHD2-209ENST00000627185 TRIM9Q9C026 710 aa9.5□□□□□ -0.89
CHD2-209ENST00000627185 TTYH3Q9C0H2 523 aa9.5□□□□□ -0.89
CHD2-209ENST00000627185 HAUS4Q9H6D7 363 aa9.5□□□□□ -0.89
CHD2-209ENST00000627185 ABHD10Q9NUJ1 306 aa9.5□□□□□ -0.89
CHD2-209ENST00000627185 MTMR4Q9NYA4 1195 aa9.5□□□□□ -0.89
CHD2-209ENST00000627185 CDC23Q9UJX2 597 aa9.5□□□□□ -0.89
CHD2-209ENST00000627185 NAV1Q8NEY1 1877 aa9.5□□□□□ -0.89
CHD2-209ENST00000627185 UBR3Q6ZT12 1888 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 COL2A1P02458 1487 aaPredicted RBP9.49□□□□□ -0.89
CHD2-209ENST00000627185 NRXN2Q9P2S2 1712 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 CCDC151A5D8V7 595 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 FGFR1OPO95684 399 aaKnown RBP9.49□□□□□ -0.89
CHD2-209ENST00000627185 SERPINB2P05120 415 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 PDHBP11177 359 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 ATP2B1P20020 1258 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 ADKP55263 362 aaKnown RBP9.49□□□□□ -0.89
CHD2-209ENST00000627185 GNG11P61952 73 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 EHHADHQ08426 723 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 BRD3Q15059 726 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 ELF2Q15723 593 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 WHAMMP3Q1A5X7 153 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 NBPF20Q3BBV1 942 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 NOM1Q5C9Z4 860 aaKnown RBP9.49□□□□□ -0.89
CHD2-209ENST00000627185 CENPPQ6IPU0 288 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 RAD9BQ6WBX8 426 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 TOGARAM2Q6ZUX3 1019 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 SRGAP1Q7Z6B7 1085 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 AMIGO3Q86WK7 504 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 RNF135Q8IUD6 432 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 TEX11Q8IYF3 940 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 GUF1Q8N442 669 aaKnown RBP9.49□□□□□ -0.89
CHD2-209ENST00000627185 MB21D1Q8N884 522 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 MSANTD4Q8NCY6 345 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 EHBP1Q8NDI1 1231 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 MNS1Q8NEH6 495 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 DYNLL2Q96FJ2 89 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 TMEM60Q9H2L4 133 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 RIC8AQ9NPQ8 531 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 ZNHIT6Q9NWK9 470 aaKnown RBP9.49□□□□□ -0.89
CHD2-209ENST00000627185 SEC63Q9UGP8 760 aaKnown RBP9.49□□□□□ -0.89
CHD2-209ENST00000627185 RAB21Q9UL25 225 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 ATP6V0A2Q9Y487 856 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 MAP4K5Q9Y4K4 846 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 FOCADQ5VW36 1801 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 TAF1P21675 1872 aa9.49□□□□□ -0.89
CHD2-209ENST00000627185 CYP3A7-CYP3A51PA0A087WV96 503 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 PNMA6FA0A0J9YX94 578 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 USP17L3A6NCW0 530 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 USP17L4A6NCW7 530 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 SMCO2A6NFE2 343 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 POLRMTO00411 1230 aaKnown RBP9.48□□□□□ -0.89
CHD2-209ENST00000627185 PSMD14O00487 310 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 UFL1O94874 794 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 CYP3A7P24462 503 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 CASP14P31944 242 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 FXR1P51114 621 aaKnown RBP eCLIP9.48□□□□□ -0.895e-6■□□□□ 10
CHD2-209ENST00000627185 NAPAP54920 295 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 PIP4K2BP78356 416 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 KRT83P78385 493 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 LRRC63Q05C16 580 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 ITIH3Q06033 890 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 ERCC6LQ2NKX8 1250 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 SOGA3Q5TF21 947 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 SPRYD7Q5W111 196 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 PTF1AQ7RTS3 328 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 USP17L1Q7RTZ2 530 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 CCDC84Q86UT8 332 aaPredicted RBP9.48□□□□□ -0.89
CHD2-209ENST00000627185 CABP7Q86V35 215 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 REXO1Q8N1G1 1221 aaKnown RBP9.48□□□□□ -0.89
CHD2-209ENST00000627185 RUBCNQ92622 972 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 PBXIP1Q96AQ6 731 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 MBOAT7Q96N66 472 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 C8orf37Q96NL8 207 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 WDR24Q96S15 920 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 MMTAG2Q9BU76 263 aaKnown RBP9.48□□□□□ -0.89
CHD2-209ENST00000627185 TRPC5Q9UL62 973 aaPredicted RBP9.48□□□□□ -0.89
CHD2-209ENST00000627185 CTNND2Q9UQB3 1225 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 DAGLAQ9Y4D2 1042 aa9.48□□□□□ -0.89
CHD2-209ENST00000627185 GREB1LQ9C091 1923 aaPredicted RBP9.47□□□□□ -0.89
CHD2-209ENST00000627185 hCG_1642624A0A1W2PR95 340 aa9.47□□□□□ -0.89
CHD2-209ENST00000627185 ANO9A1A5B4 782 aa9.47□□□□□ -0.89
CHD2-209ENST00000627185 EIF3CLB5ME19 914 aaKnown RBP9.47□□□□□ -0.89
CHD2-209ENST00000627185 URI1O94763 535 aaPredicted RBP9.47□□□□□ -0.89
CHD2-209ENST00000627185 LCA5LO95447 670 aa9.47□□□□□ -0.89
CHD2-209ENST00000627185 TTLL1O95922 423 aa9.47□□□□□ -0.89
CHD2-209ENST00000627185 SKIP12755 728 aa9.47□□□□□ -0.89
CHD2-209ENST00000627185 ALDH1B1P30837 517 aa9.47□□□□□ -0.89
CHD2-209ENST00000627185 MARSP56192 900 aaKnown RBP9.47□□□□□ -0.89
CHD2-209ENST00000627185 ZBED6P86452 979 aa9.47□□□□□ -0.89
CHD2-209ENST00000627185 AMPD2Q01433 879 aa9.47□□□□□ -0.89
CHD2-209ENST00000627185 PPP2R3AQ06190 1150 aa9.47□□□□□ -0.89
CHD2-209ENST00000627185 ZNF543Q08ER8 600 aa9.47□□□□□ -0.89
CHD2-209ENST00000627185 KARSQ15046 597 aaKnown RBP9.47□□□□□ -0.89
CHD2-209ENST00000627185 GRIK5Q16478 980 aa9.47□□□□□ -0.89
CHD2-209ENST00000627185 INF2Q27J81 1249 aa9.47□□□□□ -0.89
CHD2-209ENST00000627185 TMEM119Q4V9L6 283 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms