RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 FUT2Q10981 343 aa22.95■■□□□ 1.26
R3HCC1-210ENST00000625275 STXBP2Q15833 593 aa22.95■■□□□ 1.26
R3HCC1-210ENST00000625275 NTRK3Q16288 839 aa22.95■■□□□ 1.26
R3HCC1-210ENST00000625275 RASIP1Q5U651 963 aa22.95■■□□□ 1.26
R3HCC1-210ENST00000625275 ARHGEF16Q5VV41 709 aa22.95■■□□□ 1.26
R3HCC1-210ENST00000625275 SEPT14Q6ZU15 432 aa22.95■■□□□ 1.26
R3HCC1-210ENST00000625275 ZNF365Q70YC5 407 aa22.95■■□□□ 1.26
R3HCC1-210ENST00000625275 CCDC82Q8N4S0 544 aa22.95■■□□□ 1.26
R3HCC1-210ENST00000625275 TET1Q8NFU7 2136 aa22.95■■□□□ 1.26
R3HCC1-210ENST00000625275 CDX2Q99626 313 aaPredicted RBP22.95■■□□□ 1.26
R3HCC1-210ENST00000625275 SPZ1Q9BXG8 430 aa22.95■■□□□ 1.26
R3HCC1-210ENST00000625275 RIOX1Q9H6W3 641 aa22.95■■□□□ 1.26
R3HCC1-210ENST00000625275 PCDHA1Q9Y5I3 950 aa22.95■■□□□ 1.26
R3HCC1-210ENST00000625275 EIF2AK2P19525 551 aaKnown RBP22.94■■□□□ 1.26
R3HCC1-210ENST00000625275 DNAJB2P25686 324 aa22.94■■□□□ 1.26
R3HCC1-210ENST00000625275 HOMER1Q86YM7 354 aa22.94■■□□□ 1.26
R3HCC1-210ENST00000625275 WNT8AQ9H1J5 351 aa22.94■■□□□ 1.26
R3HCC1-210ENST00000625275 PXMP2Q9NR77 195 aa22.94■■□□□ 1.26
R3HCC1-210ENST00000625275 TRMT13Q9NUP7 481 aaKnown RBP22.94■■□□□ 1.26
R3HCC1-210ENST00000625275 CNTNAP5Q8WYK1 1306 aa22.94■■□□□ 1.26
R3HCC1-210ENST00000625275 SUPT20HL2P0C7V6 817 aa22.93■■□□□ 1.26
R3HCC1-210ENST00000625275 SMARCA1P28370 1054 aa22.93■■□□□ 1.26
R3HCC1-210ENST00000625275 CCL23P55773 120 aa22.93■■□□□ 1.26
R3HCC1-210ENST00000625275 MAP3K20Q9NYL2 800 aaKnown RBP22.93■■□□□ 1.26
R3HCC1-210ENST00000625275 CPLX1O14810 134 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 GH1P01241 217 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 ARHGAP1Q07960 439 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 TRAF1Q13077 416 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 NBPF20Q3BBV1 942 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 FAM47CQ5HY64 1035 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 NFRKBQ6P4R8 1299 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 CCDC83Q8IWF9 413 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 PIGSQ96S52 555 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 PPFIA3O75145 1194 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 NR3C2P08235 984 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 MMP3P08254 477 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 IFNAR1P17181 557 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 LY6KQ17RY6 165 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 SAMD3Q8N6K7 520 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 AFG1LQ8WV93 481 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 HERVK_113Q902F9 699 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 MTIF3Q9H2K0 278 aaKnown RBP22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 TSHZ2Q9NRE2 1034 aa22.92■■□□□ 1.26
R3HCC1-210ENST00000625275 CDH23Q9H251 3354 aa22.91■■□□□ 1.26
R3HCC1-210ENST00000625275 K7ELQ4 463 aaPredicted RBP22.91■■□□□ 1.26
R3HCC1-210ENST00000625275 DTNBO60941 627 aa22.91■■□□□ 1.26
R3HCC1-210ENST00000625275 EIF3JO75822 258 aaKnown RBP22.91■■□□□ 1.26
R3HCC1-210ENST00000625275 CTDNEP1O95476 244 aa22.91■■□□□ 1.26
R3HCC1-210ENST00000625275 CYP2C9P11712 490 aa22.91■■□□□ 1.26
R3HCC1-210ENST00000625275 HSCBQ8IWL3 235 aa22.91■■□□□ 1.26
R3HCC1-210ENST00000625275 PIBF1Q8WXW3 757 aa22.91■■□□□ 1.26
R3HCC1-210ENST00000625275 MYLIPQ8WY64 445 aa22.91■■□□□ 1.26
R3HCC1-210ENST00000625275 PHKBQ93100 1093 aa22.91■■□□□ 1.26
R3HCC1-210ENST00000625275 FGBP02675 491 aa22.9■■□□□ 1.26
R3HCC1-210ENST00000625275 HOXA13P31271 388 aaPredicted RBP22.9■■□□□ 1.26
R3HCC1-210ENST00000625275 PTPN11Q06124 597 aaPredicted RBP22.9■■□□□ 1.26
R3HCC1-210ENST00000625275 CPLX2Q6PUV4 134 aaKnown RBP22.9■■□□□ 1.26
R3HCC1-210ENST00000625275 PDCD2LQ9BRP1 358 aa22.9■■□□□ 1.26
R3HCC1-210ENST00000625275 KAT6AQ92794 2004 aa22.89■■□□□ 1.26
R3HCC1-210ENST00000625275 PTPRSQ13332 1948 aa22.89■■□□□ 1.25
R3HCC1-210ENST00000625275 PNMA6FA0A0J9YX94 578 aa22.89■■□□□ 1.25
R3HCC1-210ENST00000625275 hCG_1642624A0A1W2PR95 340 aa22.89■■□□□ 1.25
R3HCC1-210ENST00000625275 RPUSD2Q8IZ73 545 aaKnown RBP22.89■■□□□ 1.25
R3HCC1-210ENST00000625275 NSUN7Q8NE18 718 aaKnown RBP22.89■■□□□ 1.25
R3HCC1-210ENST00000625275 PPP1R13LQ8WUF5 828 aa22.89■■□□□ 1.25
R3HCC1-210ENST00000625275 TIFAQ96CG3 184 aa22.89■■□□□ 1.25
R3HCC1-210ENST00000625275 RRP36Q96EU6 259 aaKnown RBP22.89■■□□□ 1.25
R3HCC1-210ENST00000625275 SCLYQ96I15 445 aa22.89■■□□□ 1.25
R3HCC1-210ENST00000625275 CXXC1Q9P0U4 656 aaPredicted RBP22.89■■□□□ 1.25
R3HCC1-210ENST00000625275 DDX41Q9UJV9 622 aaKnown RBP22.89■■□□□ 1.25
R3HCC1-210ENST00000625275 MRVI1Q9Y6F6 885 aa22.89■■□□□ 1.25
R3HCC1-210ENST00000625275 GRXCR1A8MXD5 290 aa22.88■■□□□ 1.25
R3HCC1-210ENST00000625275 CDKL5O76039 1030 aa22.88■■□□□ 1.25
R3HCC1-210ENST00000625275 EMID1Q96A84 441 aaPredicted RBP22.88■■□□□ 1.25
R3HCC1-210ENST00000625275 SLC26A6Q9BXS9 759 aa22.88■■□□□ 1.25
R3HCC1-210ENST00000625275 RNF26Q9BY78 433 aaPredicted RBP22.88■■□□□ 1.25
R3HCC1-210ENST00000625275 PBX4Q9BYU1 374 aa22.88■■□□□ 1.25
R3HCC1-210ENST00000625275 V9GY48 417 aaPredicted RBP22.88■■□□□ 1.25
R3HCC1-210ENST00000625275 GCOM1H8Y6P7 765 aaPredicted RBP22.87■■□□□ 1.25
R3HCC1-210ENST00000625275 POLR2MP0CAP2 368 aa22.87■■□□□ 1.25
R3HCC1-210ENST00000625275 MYCLP12524 364 aaPredicted RBP22.87■■□□□ 1.25
R3HCC1-210ENST00000625275 PGM5Q15124 567 aa22.87■■□□□ 1.25
R3HCC1-210ENST00000625275 OTOP2Q7RTS6 562 aa22.87■■□□□ 1.25
R3HCC1-210ENST00000625275 MAFAQ8NHW3 353 aaPredicted RBP22.87■■□□□ 1.25
R3HCC1-210ENST00000625275 PRPF3O43395 683 aaKnown RBP22.86■■□□□ 1.25
R3HCC1-210ENST00000625275 JAK2O60674 1132 aa22.86■■□□□ 1.25
R3HCC1-210ENST00000625275 PFKMP08237 780 aa22.86■■□□□ 1.25
R3HCC1-210ENST00000625275 FOSL2P15408 326 aa22.86■■□□□ 1.25
R3HCC1-210ENST00000625275 PBX2P40425 430 aa22.86■■□□□ 1.25
R3HCC1-210ENST00000625275 CHMP4BP1P59074 171 aa22.86■■□□□ 1.25
R3HCC1-210ENST00000625275 CUL4AQ13619 759 aa22.86■■□□□ 1.25
R3HCC1-210ENST00000625275 TRIM22Q8IYM9 498 aa22.86■■□□□ 1.25
R3HCC1-210ENST00000625275 IL31RAQ8NI17 732 aa22.86■■□□□ 1.25
R3HCC1-210ENST00000625275 VWCEQ96DN2 955 aa22.86■■□□□ 1.25
R3HCC1-210ENST00000625275 ZNF576Q9H609 170 aa22.86■■□□□ 1.25
R3HCC1-210ENST00000625275 SEC63Q9UGP8 760 aaKnown RBP22.86■■□□□ 1.25
R3HCC1-210ENST00000625275 PITPNM1O00562 1244 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 RGS20O76081 388 aa22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 SSRP1Q08945 709 aaKnown RBP22.85■■□□□ 1.25
R3HCC1-210ENST00000625275 DGKDQ16760 1214 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms