RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 SH3RF3Q8TEJ3 882 aaPredicted RBP8.78□□□□□ -1
CHD7-212ENST00000618450 RNF14Q9UBS8 474 aa8.78□□□□□ -1
CHD7-212ENST00000618450 NIP7Q9Y221 180 aaKnown RBP eCLIP8.78□□□□□ -1
CHD7-212ENST00000618450 KLRC1P26715 233 aa8.78□□□□□ -1
CHD7-212ENST00000618450 LSP1P33241 339 aa8.78□□□□□ -1
CHD7-212ENST00000618450 C16orf86Q6ZW13 317 aa8.78□□□□□ -1
CHD7-212ENST00000618450 LINC00116Q8NCU8 138 aa8.78□□□□□ -1
CHD7-212ENST00000618450 SMARCC1Q92922 1105 aaPredicted RBP8.78□□□□□ -1
CHD7-212ENST00000618450 BORCS6Q96GS4 357 aa8.78□□□□□ -1
CHD7-212ENST00000618450 EPN3Q9H201 632 aa8.78□□□□□ -1
CHD7-212ENST00000618450 UBR3Q6ZT12 1888 aa8.78□□□□□ -1
CHD7-212ENST00000618450 ERVK-9P63128 1117 aa8.78□□□□□ -1
CHD7-212ENST00000618450 HSP90B2PQ58FF3 399 aa8.78□□□□□ -1
CHD7-212ENST00000618450 TNFAIP8L3Q5GJ75 292 aa8.78□□□□□ -1
CHD7-212ENST00000618450 NAA35Q5VZE5 725 aa8.78□□□□□ -1
CHD7-212ENST00000618450 EPM2AIP1Q7L775 607 aaPredicted RBP8.78□□□□□ -1
CHD7-212ENST00000618450 MBOAT7Q96N66 472 aa8.78□□□□□ -1
CHD7-212ENST00000618450 ACBD3Q9H3P7 528 aa8.78□□□□□ -1
CHD7-212ENST00000618450 TMBIM4Q9HC24 238 aa8.78□□□□□ -1
CHD7-212ENST00000618450 SIX2Q9NPC8 291 aa8.78□□□□□ -1
CHD7-212ENST00000618450 PLCB1Q9NQ66 1216 aa8.78□□□□□ -1
CHD7-212ENST00000618450 KIF5BP33176 963 aa8.78□□□□□ -1
CHD7-212ENST00000618450 JAM2P57087 298 aa8.78□□□□□ -1
CHD7-212ENST00000618450 RHBDL3P58872 404 aa8.78□□□□□ -1
CHD7-212ENST00000618450 SPIRE1Q08AE8 756 aa8.78□□□□□ -1
CHD7-212ENST00000618450 PTGISQ16647 500 aa8.78□□□□□ -1
CHD7-212ENST00000618450 TMC4Q7Z404 712 aa8.78□□□□□ -1
CHD7-212ENST00000618450 USP38Q8NB14 1042 aa8.78□□□□□ -1
CHD7-212ENST00000618450 SLC44A5Q8NCS7 719 aa8.78□□□□□ -1
CHD7-212ENST00000618450 RAD54LQ92698 747 aa8.78□□□□□ -1
CHD7-212ENST00000618450 PACSIN1Q9BY11 444 aa8.78□□□□□ -1
CHD7-212ENST00000618450 CPVLQ9H3G5 476 aa8.78□□□□□ -1
CHD7-212ENST00000618450 SLC39A2Q9NP94 309 aa8.78□□□□□ -1
CHD7-212ENST00000618450 STK17AQ9UEE5 414 aa8.78□□□□□ -1
CHD7-212ENST00000618450 ATF5Q9Y2D1 282 aaPredicted RBP8.78□□□□□ -1
CHD7-212ENST00000618450 THSD7AQ9UPZ6 1657 aa8.77□□□□□ -1
CHD7-212ENST00000618450 A0A087X0T9 212 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 FAM228BP0C875 321 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 SLC18A3Q16572 532 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 ARSHQ5FYA8 562 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 PROM2Q8N271 834 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 ANKRD20A12PQ8NF67 263 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 RBM46Q8TBY0 533 aaKnown RBP8.77□□□□□ -1.01
CHD7-212ENST00000618450 BCAS4Q8TDM0 211 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 CCDC42Q96M95 316 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 CEP72Q9P209 647 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 AJAP1Q9UKB5 411 aaPredicted RBP8.77□□□□□ -1.01
CHD7-212ENST00000618450 MCCD1P59942 119 aaPredicted RBP8.77□□□□□ -1.01
CHD7-212ENST00000618450 GABPAQ06546 454 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 FBXW10Q5XX13 1052 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 PPP4R3AQ6IN85 833 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.77□□□□□ -1.01
CHD7-212ENST00000618450 JADE2Q9NQC1 790 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 PCDHA3Q9Y5H8 950 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 FLT3P36888 993 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 TECP42680 631 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 TBC1D9BQ66K14 1250 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 KIAA1328Q86T90 577 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 ANKRD18AQ8IVF6 992 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 ACTRT1Q8TDG2 376 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 ATP8B4Q8TF62 1192 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 P2RX7Q99572 595 aaKnown RBP8.77□□□□□ -1.01
CHD7-212ENST00000618450 CRNKL1Q9BZJ0 848 aaKnown RBP8.77□□□□□ -1.01
CHD7-212ENST00000618450 ADAM7Q9H2U9 754 aa8.77□□□□□ -1.01
CHD7-212ENST00000618450 MEFVO15553 781 aaPredicted RBP8.76□□□□□ -1.01
CHD7-212ENST00000618450 RAD51CO43502 376 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 UBA7P41226 1012 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 GNGT1P63211 74 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 PSMD2Q13200 908 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 PDCLQ13371 301 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 FAM83BQ5T0W9 1011 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 WLSQ5T9L3 541 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 NEK8Q86SG6 692 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 CCDC84Q86UT8 332 aaPredicted RBP8.76□□□□□ -1.01
CHD7-212ENST00000618450 FAM114A1Q8IWE2 563 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 MICALL1Q8N3F8 863 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 SLC30A5Q8TAD4 765 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 TBCKQ8TEA7 893 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 OSBPL7Q9BZF2 842 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 ISCUQ9H1K1 167 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 KCNMB3Q9NPA1 279 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 FAM207AQ9NSI2 230 aaPredicted RBP8.76□□□□□ -1.01
CHD7-212ENST00000618450 TMEM260Q9NX78 707 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 CNOT8Q9UFF9 292 aaKnown RBP8.76□□□□□ -1.01
CHD7-212ENST00000618450 NFU1Q9UMS0 254 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 ATP6V0A2Q9Y487 856 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 TACC1O75410 805 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 PALMO75781 387 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 RASSF7Q02833 373 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 NEDD1Q8NHV4 660 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 MYCBPAPQ8TBZ2 947 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 LZTS2Q9BRK4 669 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 GPR88Q9GZN0 384 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 ANKRD31Q8N7Z5 1873 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 CCNT1O60563 726 aaKnown RBP8.76□□□□□ -1.01
CHD7-212ENST00000618450 PRKCIP41743 596 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 ATP2B2Q01814 1243 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 KRT25Q7Z3Z0 450 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 SCFD1Q8WVM8 642 aa8.76□□□□□ -1.01
CHD7-212ENST00000618450 DDX12PQ92771 950 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms